RNA–Protein interactions for RNA: ENST00000483821.1

RXRB-205, Transcript of retinoid X receptor beta, humanhuman

TSL 2

Gene RXRB, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-205ENST00000483821 SLC24A1O60721 1099 aa18.7■□□□□ 0.58
RXRB-205ENST00000483821 HDGFP51858 240 aaKnown RBP18.7■□□□□ 0.58
RXRB-205ENST00000483821 DDX10Q13206 875 aaKnown RBP18.7■□□□□ 0.58
RXRB-205ENST00000483821 ADGRF5Q8IZF2 1346 aa18.7■□□□□ 0.58
RXRB-205ENST00000483821 KIAA1210Q9ULL0 1709 aa18.69■□□□□ 0.58
RXRB-205ENST00000483821 IFT172Q9UG01 1749 aa18.68■□□□□ 0.58
RXRB-205ENST00000483821 ST20-MTHFSA0A0A6YYL1 179 aa18.67■□□□□ 0.58
RXRB-205ENST00000483821 C14orf93Q9H972 538 aaKnown RBP18.67■□□□□ 0.58
RXRB-205ENST00000483821 TMEM131LA2VDJ0 1609 aa18.67■□□□□ 0.58
RXRB-205ENST00000483821 EIF3AQ14152 1382 aaKnown RBP18.67■□□□□ 0.58
RXRB-205ENST00000483821 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.66■□□□□ 0.58
RXRB-205ENST00000483821 CCDC7Q96M83 1385 aa18.66■□□□□ 0.58
RXRB-205ENST00000483821 PPLO60437 1756 aa18.65■□□□□ 0.58
RXRB-205ENST00000483821 CFAP70Q5T0N1 1121 aa18.65■□□□□ 0.58
RXRB-205ENST00000483821 WASHC2AQ641Q2 1341 aa18.65■□□□□ 0.58
RXRB-205ENST00000483821 SCAF11Q99590 1463 aaKnown RBP18.65■□□□□ 0.58
RXRB-205ENST00000483821 PIK3C2GO75747 1445 aa18.64■□□□□ 0.57
RXRB-205ENST00000483821 NEXMIFQ5QGS0 1516 aa18.64■□□□□ 0.57
RXRB-205ENST00000483821 NLRP1Q9C000 1473 aa18.63■□□□□ 0.57
RXRB-205ENST00000483821 A2ML1A8K2U0 1454 aa18.62■□□□□ 0.57
RXRB-205ENST00000483821 FER1L4A9Z1Z3 1794 aa18.61■□□□□ 0.57
RXRB-205ENST00000483821 KIF7Q2M1P5 1343 aa18.61■□□□□ 0.57
RXRB-205ENST00000483821 SETBP1Q9Y6X0 1596 aa18.6■□□□□ 0.57
RXRB-205ENST00000483821 MIER1Q8N108 512 aa18.6■□□□□ 0.57
RXRB-205ENST00000483821 C11orf95C9JLR9 678 aaPredicted RBP18.59■□□□□ 0.57
RXRB-205ENST00000483821 TMF1P82094 1093 aa18.59■□□□□ 0.57
RXRB-205ENST00000483821 CDCA8Q53HL2 280 aa18.59■□□□□ 0.57
RXRB-205ENST00000483821 RIMS2Q9UQ26 1411 aa18.58■□□□□ 0.57
RXRB-205ENST00000483821 KDM5AP29375 1690 aaKnown RBP18.58■□□□□ 0.57
RXRB-205ENST00000483821 ANP32CO43423 234 aa18.57■□□□□ 0.56
RXRB-205ENST00000483821 CEBPAP49715 358 aaPredicted RBP18.57■□□□□ 0.56
RXRB-205ENST00000483821 NUTM2DQ5VT03 806 aaPredicted RBP18.56■□□□□ 0.56
RXRB-205ENST00000483821 POLR1AO95602 1720 aaPredicted RBP18.55■□□□□ 0.56
RXRB-205ENST00000483821 C3P01024 1663 aa18.55■□□□□ 0.56
RXRB-205ENST00000483821 TESK2Q96S53 571 aa18.55■□□□□ 0.56
RXRB-205ENST00000483821 IQGAP1P46940 1657 aa18.54■□□□□ 0.56
RXRB-205ENST00000483821 THEMISQ8N1K5 641 aaPredicted RBP18.54■□□□□ 0.56
RXRB-205ENST00000483821 POLR3GLQ9BT43 218 aa18.53■□□□□ 0.56
RXRB-205ENST00000483821 TMEM2Q9UHN6 1383 aa18.53■□□□□ 0.56
RXRB-205ENST00000483821 MYO5BQ9ULV0 1848 aa18.52■□□□□ 0.56
RXRB-205ENST00000483821 EID1Q9Y6B2 187 aa18.52■□□□□ 0.56
RXRB-205ENST00000483821 ADAMTSL3P82987 1691 aa18.51■□□□□ 0.55
RXRB-205ENST00000483821 ADGRB1O14514 1584 aa18.5■□□□□ 0.55
RXRB-205ENST00000483821 CENPJQ9HC77 1338 aaPredicted RBP18.49■□□□□ 0.55
RXRB-205ENST00000483821 TMEM132EQ6IEE7 984 aa18.49■□□□□ 0.55
RXRB-205ENST00000483821 PLPPR3Q6T4P5 718 aa18.49■□□□□ 0.55
RXRB-205ENST00000483821 SBNO2Q9Y2G9 1366 aa18.49■□□□□ 0.55
RXRB-205ENST00000483821 TRAK1Q9UPV9 953 aa18.48■□□□□ 0.55
RXRB-205ENST00000483821 RIMS1Q86UR5 1692 aaKnown RBP18.47■□□□□ 0.55
RXRB-205ENST00000483821 UBR1Q8IWV7 1749 aa18.47■□□□□ 0.55
RXRB-205ENST00000483821 BCANQ96GW7 911 aa18.46■□□□□ 0.55
RXRB-205ENST00000483821 ALKQ9UM73 1620 aa18.45■□□□□ 0.54
RXRB-205ENST00000483821 CCER2I3L3R5 266 aa18.45■□□□□ 0.54
RXRB-205ENST00000483821 TXNDC2Q86VQ3 553 aa18.45■□□□□ 0.54
RXRB-205ENST00000483821 DISP3Q9P2K9 1392 aa18.43■□□□□ 0.54
RXRB-205ENST00000483821 PUS7Q96PZ0 661 aaKnown RBP18.43■□□□□ 0.54
RXRB-205ENST00000483821 SLIT1O75093 1534 aa18.43■□□□□ 0.54
RXRB-205ENST00000483821 PLEKHG1Q9ULL1 1385 aa18.42■□□□□ 0.54
RXRB-205ENST00000483821 MYO3AQ8NEV4 1616 aa18.42■□□□□ 0.54
RXRB-205ENST00000483821 YTHDC2Q9H6S0 1430 aaKnown RBP18.42■□□□□ 0.54
RXRB-205ENST00000483821 ARHGAP23Q9P227 1491 aa18.41■□□□□ 0.54
RXRB-205ENST00000483821 POGKQ9P215 609 aa18.41■□□□□ 0.54
RXRB-205ENST00000483821 STK26Q9P289 416 aa18.41■□□□□ 0.54
RXRB-205ENST00000483821 LRPPRCP42704 1394 aaKnown RBP18.41■□□□□ 0.54
RXRB-205ENST00000483821 SIRT1Q96EB6 747 aa18.4■□□□□ 0.54
RXRB-205ENST00000483821 EVC2Q86UK5 1308 aa18.39■□□□□ 0.53
RXRB-205ENST00000483821 ABCC11Q96J66 1382 aa18.39■□□□□ 0.53
RXRB-205ENST00000483821 SETD1BQ9UPS6 1966 aaKnown RBP18.39■□□□□ 0.53
RXRB-205ENST00000483821 LTKP29376 864 aa18.38■□□□□ 0.53
RXRB-205ENST00000483821 CEP170BQ9Y4F5 1589 aaPredicted RBP18.38■□□□□ 0.53
RXRB-205ENST00000483821 PTPRMP28827 1452 aa18.37■□□□□ 0.53
RXRB-205ENST00000483821 DLC1Q96QB1 1528 aa18.37■□□□□ 0.53
RXRB-205ENST00000483821 KTN1Q86UP2 1357 aaKnown RBP18.36■□□□□ 0.53
RXRB-205ENST00000483821 ANKLE2Q86XL3 938 aa18.36■□□□□ 0.53
RXRB-205ENST00000483821 ASXL1Q8IXJ9 1541 aa18.36■□□□□ 0.53
RXRB-205ENST00000483821 SENP3Q9H4L4 574 aaPredicted RBP18.36■□□□□ 0.53
RXRB-205ENST00000483821 TBX22Q9Y458 520 aa18.36■□□□□ 0.53
RXRB-205ENST00000483821 PRKRIP1Q9H875 184 aaPredicted RBP18.35■□□□□ 0.53
RXRB-205ENST00000483821 PRAM1Q96QH2 718 aa18.34■□□□□ 0.53
RXRB-205ENST00000483821 PANK3Q9H999 370 aa18.34■□□□□ 0.53
RXRB-205ENST00000483821 ARHGEF28Q8N1W1 1705 aaKnown RBP18.32■□□□□ 0.52
RXRB-205ENST00000483821 QRICH2Q9H0J4 1663 aa18.32■□□□□ 0.52
RXRB-205ENST00000483821 NRXN3Q9Y4C0 1643 aa18.32■□□□□ 0.52
RXRB-205ENST00000483821 RALBP1Q15311 655 aa18.32■□□□□ 0.52
RXRB-205ENST00000483821 FAM135BQ49AJ0 1406 aa18.32■□□□□ 0.52
RXRB-205ENST00000483821 ADAMTS13Q76LX8 1427 aa18.32■□□□□ 0.52
RXRB-205ENST00000483821 ZNF142P52746 1687 aaPredicted RBP18.31■□□□□ 0.52
RXRB-205ENST00000483821 METP08581 1390 aa18.31■□□□□ 0.52
RXRB-205ENST00000483821 KNSTRNQ9Y448 316 aa18.31■□□□□ 0.52
RXRB-205ENST00000483821 DIP2AQ14689 1571 aa18.3■□□□□ 0.52
RXRB-205ENST00000483821 MED14O60244 1454 aa18.3■□□□□ 0.52
RXRB-205ENST00000483821 TECPR2O15040 1411 aa18.3■□□□□ 0.52
RXRB-205ENST00000483821 SETD1AO15047 1707 aaKnown RBP18.29■□□□□ 0.52
RXRB-205ENST00000483821 PER1O15534 1290 aaPredicted RBP18.29■□□□□ 0.52
RXRB-205ENST00000483821 NINLQ9Y2I6 1382 aa18.29■□□□□ 0.52
RXRB-205ENST00000483821 SAFB2Q14151 953 aaKnown RBP eCLIP18.28■□□□□ 0.52
RXRB-205ENST00000483821 PIK3R4Q99570 1358 aa18.28■□□□□ 0.52
RXRB-205ENST00000483821 CENPBP07199 599 aaPredicted RBP18.27■□□□□ 0.52
RXRB-205ENST00000483821 ATAD2Q6PL18 1390 aa18.27■□□□□ 0.51
RXRB-205ENST00000483821 MINK1Q8N4C8 1332 aaPredicted RBP18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms