RNA–Protein interactions for RNA: ENST00000482910.1

COL16A1-213, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 676 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-213ENST00000482910 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.54■■□□□ 1.2
COL16A1-213ENST00000482910 CLTCL1P53675 1640 aa22.53■■□□□ 1.2
COL16A1-213ENST00000482910 CHGAP10645 457 aaKnown RBP22.53■■□□□ 1.2
COL16A1-213ENST00000482910 RAB3GAP2Q9H2M9 1393 aa22.51■■□□□ 1.19
COL16A1-213ENST00000482910 PLEKHG1Q9ULL1 1385 aa22.51■■□□□ 1.19
COL16A1-213ENST00000482910 KIF1BO60333 1816 aa22.5■■□□□ 1.19
COL16A1-213ENST00000482910 MPHOSPH9Q99550 1183 aa22.5■■□□□ 1.19
COL16A1-213ENST00000482910 HRCP23327 699 aa22.49■■□□□ 1.19
COL16A1-213ENST00000482910 STRCP1A6NGW2 1772 aa22.48■■□□□ 1.19
COL16A1-213ENST00000482910 PPP1R15AO75807 674 aaPredicted RBP22.47■■□□□ 1.19
COL16A1-213ENST00000482910 DIP2AQ14689 1571 aa22.43■■□□□ 1.18
COL16A1-213ENST00000482910 SLC26A8Q96RN1 970 aa22.42■■□□□ 1.18
COL16A1-213ENST00000482910 NEXMIFQ5QGS0 1516 aa22.41■■□□□ 1.18
COL16A1-213ENST00000482910 LRRC7Q96NW7 1537 aa22.41■■□□□ 1.18
COL16A1-213ENST00000482910 ZNF326Q5BKZ1 582 aaKnown RBP22.41■■□□□ 1.18
COL16A1-213ENST00000482910 TBX22Q9Y458 520 aa22.41■■□□□ 1.18
COL16A1-213ENST00000482910 NWD1Q149M9 1564 aa22.41■■□□□ 1.18
COL16A1-213ENST00000482910 CCDC144AA2RUR9 1427 aa22.4■■□□□ 1.18
COL16A1-213ENST00000482910 KCNA6P17658 529 aa22.4■■□□□ 1.18
COL16A1-213ENST00000482910 FOXD1Q16676 465 aa22.4■■□□□ 1.18
COL16A1-213ENST00000482910 BCANQ96GW7 911 aa22.4■■□□□ 1.18
COL16A1-213ENST00000482910 ADAMTS13Q76LX8 1427 aa22.4■■□□□ 1.18
COL16A1-213ENST00000482910 PIK3R4Q99570 1358 aa22.38■■□□□ 1.17
COL16A1-213ENST00000482910 SETBP1Q9Y6X0 1596 aa22.38■■□□□ 1.17
COL16A1-213ENST00000482910 RPGRIP1LQ68CZ1 1315 aa22.38■■□□□ 1.17
COL16A1-213ENST00000482910 ILDR2Q71H61 639 aa22.38■■□□□ 1.17
COL16A1-213ENST00000482910 NKTRP30414 1462 aaKnown RBP22.38■■□□□ 1.17
COL16A1-213ENST00000482910 CHD2O14647 1828 aaKnown RBP22.38■■□□□ 1.17
COL16A1-213ENST00000482910 NUTM2DQ5VT03 806 aaPredicted RBP22.36■■□□□ 1.17
COL16A1-213ENST00000482910 NRXN3Q9Y4C0 1643 aa22.35■■□□□ 1.17
COL16A1-213ENST00000482910 UBAP1LF5GYI3 381 aa22.34■■□□□ 1.17
COL16A1-213ENST00000482910 SPATA31E1Q6ZUB1 1445 aa22.33■■□□□ 1.17
COL16A1-213ENST00000482910 XIRP1Q702N8 1843 aaKnown RBP22.33■■□□□ 1.16
COL16A1-213ENST00000482910 PPLO60437 1756 aa22.33■■□□□ 1.16
COL16A1-213ENST00000482910 VGFO15240 615 aaPredicted RBP22.32■■□□□ 1.16
COL16A1-213ENST00000482910 TOM1O60784 492 aa22.32■■□□□ 1.16
COL16A1-213ENST00000482910 TMEM94Q12767 1356 aa22.27■■□□□ 1.16
COL16A1-213ENST00000482910 ANKRD30BQ9BXX2 1392 aa22.27■■□□□ 1.16
COL16A1-213ENST00000482910 PROSER2Q86WR7 435 aaPredicted RBP22.27■■□□□ 1.16
COL16A1-213ENST00000482910 SENP3Q9H4L4 574 aaPredicted RBP22.27■■□□□ 1.16
COL16A1-213ENST00000482910 ALKQ9UM73 1620 aa22.27■■□□□ 1.16
COL16A1-213ENST00000482910 IFT172Q9UG01 1749 aa22.26■■□□□ 1.15
COL16A1-213ENST00000482910 NCOA3Q9Y6Q9 1424 aa22.26■■□□□ 1.15
COL16A1-213ENST00000482910 PTPRUQ92729 1446 aa22.23■■□□□ 1.15
COL16A1-213ENST00000482910 XRN1Q8IZH2 1706 aaKnown RBP22.23■■□□□ 1.15
COL16A1-213ENST00000482910 DISP3Q9P2K9 1392 aa22.23■■□□□ 1.15
COL16A1-213ENST00000482910 SETD1AO15047 1707 aaKnown RBP22.23■■□□□ 1.15
COL16A1-213ENST00000482910 RGL3Q3MIN7 710 aa22.21■■□□□ 1.15
COL16A1-213ENST00000482910 AMOTL2Q9Y2J4 779 aa22.21■■□□□ 1.15
COL16A1-213ENST00000482910 METP08581 1390 aa22.21■■□□□ 1.15
COL16A1-213ENST00000482910 SOCS7O14512 581 aa22.19■■□□□ 1.14
COL16A1-213ENST00000482910 MSH6P52701 1360 aa22.18■■□□□ 1.14
COL16A1-213ENST00000482910 PRAG1Q86YV5 1406 aa22.17■■□□□ 1.14
COL16A1-213ENST00000482910 MYOM2P54296 1465 aa22.16■■□□□ 1.14
COL16A1-213ENST00000482910 ADGRF5Q8IZF2 1346 aa22.16■■□□□ 1.14
COL16A1-213ENST00000482910 PIP4K2BP78356 416 aa22.16■■□□□ 1.14
COL16A1-213ENST00000482910 PIK3C2GO75747 1445 aa22.14■■□□□ 1.14
COL16A1-213ENST00000482910 SCAF1Q9H7N4 1312 aaKnown RBP22.14■■□□□ 1.14
COL16A1-213ENST00000482910 TRIM26Q12899 539 aaPredicted RBP22.14■■□□□ 1.13
COL16A1-213ENST00000482910 RBM33Q96EV2 1170 aaKnown RBP22.14■■□□□ 1.13
COL16A1-213ENST00000482910 NRXN1Q9ULB1 1477 aa22.14■■□□□ 1.13
COL16A1-213ENST00000482910 PTCH1Q13635 1447 aa22.13■■□□□ 1.13
COL16A1-213ENST00000482910 STAC3Q96MF2 364 aa22.12■■□□□ 1.13
COL16A1-213ENST00000482910 FAM135BQ49AJ0 1406 aa22.12■■□□□ 1.13
COL16A1-213ENST00000482910 C19orf44Q9H6X5 657 aa22.11■■□□□ 1.13
COL16A1-213ENST00000482910 DCCP43146 1447 aa22.1■■□□□ 1.13
COL16A1-213ENST00000482910 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.1■■□□□ 1.13
COL16A1-213ENST00000482910 LAMC1P11047 1609 aa22.09■■□□□ 1.13
COL16A1-213ENST00000482910 C14orf37Q86TY3 774 aa22.08■■□□□ 1.13
COL16A1-213ENST00000482910 CADPS2Q86UW7 1296 aa22.08■■□□□ 1.13
COL16A1-213ENST00000482910 HSPA1LP34931 641 aa22.06■■□□□ 1.12
COL16A1-213ENST00000482910 C14orf93Q9H972 538 aaKnown RBP22.06■■□□□ 1.12
COL16A1-213ENST00000482910 TECPR2O15040 1411 aa22.06■■□□□ 1.12
COL16A1-213ENST00000482910 ADGRL3Q9HAR2 1447 aa22.06■■□□□ 1.12
COL16A1-213ENST00000482910 SLAIN2Q9P270 581 aa22.05■■□□□ 1.12
COL16A1-213ENST00000482910 ASXL1Q8IXJ9 1541 aa22.05■■□□□ 1.12
COL16A1-213ENST00000482910 LRPPRCP42704 1394 aaKnown RBP22.04■■□□□ 1.12
COL16A1-213ENST00000482910 ROBO2Q9HCK4 1378 aa22.04■■□□□ 1.12
COL16A1-213ENST00000482910 KNDC1Q76NI1 1749 aa22.04■■□□□ 1.12
COL16A1-213ENST00000482910 ATF3P18847 181 aa22.04■■□□□ 1.12
COL16A1-213ENST00000482910 ROBO1Q9Y6N7 1651 aa22.04■■□□□ 1.12
COL16A1-213ENST00000482910 ABCC11Q96J66 1382 aa22.03■■□□□ 1.12
COL16A1-213ENST00000482910 NALCNQ8IZF0 1738 aa22.02■■□□□ 1.12
COL16A1-213ENST00000482910 DHX57Q6P158 1386 aaKnown RBP22.01■■□□□ 1.11
COL16A1-213ENST00000482910 DCAF11Q8TEB1 546 aa22■■□□□ 1.11
COL16A1-213ENST00000482910 YTHDC2Q9H6S0 1430 aaKnown RBP21.99■■□□□ 1.11
COL16A1-213ENST00000482910 CFAP70Q5T0N1 1121 aa21.98■■□□□ 1.11
COL16A1-213ENST00000482910 SIRT1Q96EB6 747 aa21.98■■□□□ 1.11
COL16A1-213ENST00000482910 TMEM132EQ6IEE7 984 aa21.97■■□□□ 1.11
COL16A1-213ENST00000482910 MST1RQ04912 1400 aa21.96■■□□□ 1.11
COL16A1-213ENST00000482910 KDM2AQ9Y2K7 1162 aa21.95■■□□□ 1.1
COL16A1-213ENST00000482910 ADGRB1O14514 1584 aa21.95■■□□□ 1.1
COL16A1-213ENST00000482910 STK26Q9P289 416 aa21.93■■□□□ 1.1
COL16A1-213ENST00000482910 CDC42BPGQ6DT37 1551 aa21.92■■□□□ 1.1
COL16A1-213ENST00000482910 DLC1Q96QB1 1528 aa21.92■■□□□ 1.1
COL16A1-213ENST00000482910 AHDC1Q5TGY3 1603 aaPredicted RBP21.91■■□□□ 1.1
COL16A1-213ENST00000482910 KIAA1210Q9ULL0 1709 aa21.91■■□□□ 1.1
COL16A1-213ENST00000482910 PHLPP1O60346 1717 aa21.89■■□□□ 1.1
COL16A1-213ENST00000482910 BRINP3Q76B58 766 aa21.89■■□□□ 1.09
COL16A1-213ENST00000482910 WAPLQ7Z5K2 1190 aa21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms