RNA–Protein interactions for RNA: ENST00000482651.5

HDGF-208, Transcript of heparin binding growth factor, humanhuman

TSL 3

Gene HDGF, Length 966 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGF-208ENST00000482651 POLR1AO95602 1720 aaPredicted RBP13.28□□□□□ -0.28
HDGF-208ENST00000482651 IFNLR1Q8IU57 520 aaPredicted RBP13.28□□□□□ -0.28
HDGF-208ENST00000482651 ARHGAP23Q9P227 1491 aa13.28□□□□□ -0.28
HDGF-208ENST00000482651 UNC13BO14795 1591 aa13.28□□□□□ -0.28
HDGF-208ENST00000482651 IDI1Q13907 227 aa13.27□□□□□ -0.29
HDGF-208ENST00000482651 SLIT1O75093 1534 aa13.27□□□□□ -0.29
HDGF-208ENST00000482651 SYNMO15061 1565 aa13.26□□□□□ -0.29
HDGF-208ENST00000482651 UBR1Q8IWV7 1749 aa13.26□□□□□ -0.29
HDGF-208ENST00000482651 SCAF11Q99590 1463 aaKnown RBP13.26□□□□□ -0.29
HDGF-208ENST00000482651 SLC52A1Q9NWF4 448 aa13.26□□□□□ -0.29
HDGF-208ENST00000482651 STAG3Q9UJ98 1225 aa13.26□□□□□ -0.29
HDGF-208ENST00000482651 TMEM2Q9UHN6 1383 aa13.25□□□□□ -0.29
HDGF-208ENST00000482651 PIK3C2BO00750 1634 aa13.24□□□□□ -0.29
HDGF-208ENST00000482651 CPS1P31327 1500 aa13.24□□□□□ -0.29
HDGF-208ENST00000482651 TULP1O00294 542 aaPredicted RBP13.24□□□□□ -0.29
HDGF-208ENST00000482651 HRCP23327 699 aa13.24□□□□□ -0.29
HDGF-208ENST00000482651 LTKP29376 864 aa13.24□□□□□ -0.29
HDGF-208ENST00000482651 TXNDC2Q86VQ3 553 aa13.24□□□□□ -0.29
HDGF-208ENST00000482651 EID1Q9Y6B2 187 aa13.24□□□□□ -0.29
HDGF-208ENST00000482651 TET3O43151 1660 aa13.24□□□□□ -0.29
HDGF-208ENST00000482651 NUP155O75694 1391 aa13.23□□□□□ -0.29
HDGF-208ENST00000482651 IQGAP1P46940 1657 aa13.22□□□□□ -0.29
HDGF-208ENST00000482651 ADGRB3O60242 1522 aa13.22□□□□□ -0.29
HDGF-208ENST00000482651 KDM5AP29375 1690 aaKnown RBP13.21□□□□□ -0.29
HDGF-208ENST00000482651 IQGAP3Q86VI3 1631 aa13.21□□□□□ -0.29
HDGF-208ENST00000482651 CFAP65Q6ZU64 1925 aaKnown RBP13.2□□□□□ -0.3
HDGF-208ENST00000482651 NAIPQ13075 1403 aa13.2□□□□□ -0.3
HDGF-208ENST00000482651 GCC2Q8IWJ2 1684 aa13.19□□□□□ -0.3
HDGF-208ENST00000482651 UBAP1LF5GYI3 381 aa13.19□□□□□ -0.3
HDGF-208ENST00000482651 PAXIP1Q6ZW49 1069 aaPredicted RBP13.18□□□□□ -0.3
HDGF-208ENST00000482651 HFM1A2PYH4 1435 aa13.17□□□□□ -0.3
HDGF-208ENST00000482651 SPDYE4A6NLX3 237 aa13.17□□□□□ -0.3
HDGF-208ENST00000482651 BBXQ8WY36 941 aaPredicted RBP13.17□□□□□ -0.3
HDGF-208ENST00000482651 E9PCH4 1651 aa13.16□□□□□ -0.3
HDGF-208ENST00000482651 ZFYVE9O95405 1425 aa13.15□□□□□ -0.3
HDGF-208ENST00000482651 HDGFP51858 240 aaKnown RBP13.15□□□□□ -0.3
HDGF-208ENST00000482651 PROM2Q8N271 834 aa13.15□□□□□ -0.3
HDGF-208ENST00000482651 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.15□□□□□ -0.3
HDGF-208ENST00000482651 RIMS2Q9UQ26 1411 aa13.14□□□□□ -0.31
HDGF-208ENST00000482651 LRRC7Q96NW7 1537 aa13.14□□□□□ -0.31
HDGF-208ENST00000482651 TOM1O60784 492 aa13.14□□□□□ -0.31
HDGF-208ENST00000482651 CHGAP10645 457 aaKnown RBP13.14□□□□□ -0.31
HDGF-208ENST00000482651 ARXQ96QS3 562 aa13.14□□□□□ -0.31
HDGF-208ENST00000482651 PLEKHG1Q9ULL1 1385 aa13.13□□□□□ -0.31
HDGF-208ENST00000482651 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.13□□□□□ -0.31
HDGF-208ENST00000482651 CFAP44Q96MT7 982 aa13.13□□□□□ -0.31
HDGF-208ENST00000482651 TMEM131LA2VDJ0 1609 aa13.13□□□□□ -0.31
HDGF-208ENST00000482651 PPP1R15AO75807 674 aaPredicted RBP13.12□□□□□ -0.31
HDGF-208ENST00000482651 SLC26A8Q96RN1 970 aa13.12□□□□□ -0.31
HDGF-208ENST00000482651 KCNA6P17658 529 aa13.11□□□□□ -0.31
HDGF-208ENST00000482651 STRCP1A6NGW2 1772 aa13.1□□□□□ -0.31
HDGF-208ENST00000482651 TRIM52Q96A61 297 aa13.1□□□□□ -0.31
HDGF-208ENST00000482651 PIP4K2BP78356 416 aa13.09□□□□□ -0.31
HDGF-208ENST00000482651 GTF3C3Q9Y5Q9 886 aa13.08□□□□□ -0.32
HDGF-208ENST00000482651 TBX22Q9Y458 520 aa13.07□□□□□ -0.32
HDGF-208ENST00000482651 TRPM2O94759 1503 aa13.07□□□□□ -0.32
HDGF-208ENST00000482651 TMEM94Q12767 1356 aa13.07□□□□□ -0.32
HDGF-208ENST00000482651 ALKQ9UM73 1620 aa13.06□□□□□ -0.32
HDGF-208ENST00000482651 NKTRP30414 1462 aaKnown RBP13.06□□□□□ -0.32
HDGF-208ENST00000482651 NUTM2DQ5VT03 806 aaPredicted RBP13.06□□□□□ -0.32
HDGF-208ENST00000482651 SAMD1Q6SPF0 538 aaPredicted RBP13.06□□□□□ -0.32
HDGF-208ENST00000482651 NWD1Q149M9 1564 aa13.06□□□□□ -0.32
HDGF-208ENST00000482651 ADAMTS13Q76LX8 1427 aa13.05□□□□□ -0.32
HDGF-208ENST00000482651 SPHKAPQ2M3C7 1700 aa13.05□□□□□ -0.32
HDGF-208ENST00000482651 PROSER2Q86WR7 435 aaPredicted RBP13.05□□□□□ -0.32
HDGF-208ENST00000482651 TSHZ2Q9NRE2 1034 aa13.05□□□□□ -0.32
HDGF-208ENST00000482651 HSPA1LP34931 641 aa13.04□□□□□ -0.32
HDGF-208ENST00000482651 ZNF326Q5BKZ1 582 aaKnown RBP13.04□□□□□ -0.32
HDGF-208ENST00000482651 MYO5BQ9ULV0 1848 aa13.04□□□□□ -0.32
HDGF-208ENST00000482651 DIP2AQ14689 1571 aa13.03□□□□□ -0.32
HDGF-208ENST00000482651 PIK3R4Q99570 1358 aa13.03□□□□□ -0.32
HDGF-208ENST00000482651 CLTCL1P53675 1640 aa13.02□□□□□ -0.32
HDGF-208ENST00000482651 ZNF219Q9P2Y4 722 aaPredicted RBP13.01□□□□□ -0.33
HDGF-208ENST00000482651 ACIN1Q9UKV3 1341 aaKnown RBP13.01□□□□□ -0.33
HDGF-208ENST00000482651 DISP3Q9P2K9 1392 aa13.01□□□□□ -0.33
HDGF-208ENST00000482651 RBM33Q96EV2 1170 aaKnown RBP13□□□□□ -0.33
HDGF-208ENST00000482651 SETBP1Q9Y6X0 1596 aa12.99□□□□□ -0.33
HDGF-208ENST00000482651 NEXMIFQ5QGS0 1516 aa12.99□□□□□ -0.33
HDGF-208ENST00000482651 SETD5Q9C0A6 1442 aa12.99□□□□□ -0.33
HDGF-208ENST00000482651 NCOA3Q9Y6Q9 1424 aa12.99□□□□□ -0.33
HDGF-208ENST00000482651 MSH6P52701 1360 aa12.99□□□□□ -0.33
HDGF-208ENST00000482651 MPHOSPH9Q99550 1183 aa12.99□□□□□ -0.33
HDGF-208ENST00000482651 FAM135BQ49AJ0 1406 aa12.98□□□□□ -0.33
HDGF-208ENST00000482651 XIRP1Q702N8 1843 aaKnown RBP12.98□□□□□ -0.33
HDGF-208ENST00000482651 MKRN4PQ13434 485 aaPredicted RBP12.98□□□□□ -0.33
HDGF-208ENST00000482651 PTPRUQ92729 1446 aa12.97□□□□□ -0.33
HDGF-208ENST00000482651 RPGRIP1LQ68CZ1 1315 aa12.97□□□□□ -0.33
HDGF-208ENST00000482651 AMOTL2Q9Y2J4 779 aa12.97□□□□□ -0.33
HDGF-208ENST00000482651 NRXN3Q9Y4C0 1643 aa12.96□□□□□ -0.33
HDGF-208ENST00000482651 VGFO15240 615 aaPredicted RBP12.96□□□□□ -0.33
HDGF-208ENST00000482651 U3KPZ7 1027 aaPredicted RBP12.96□□□□□ -0.33
HDGF-208ENST00000482651 CHD2O14647 1828 aaKnown RBP12.96□□□□□ -0.33
HDGF-208ENST00000482651 CCDC144AA2RUR9 1427 aa12.96□□□□□ -0.34
HDGF-208ENST00000482651 METP08581 1390 aa12.94□□□□□ -0.34
HDGF-208ENST00000482651 RAB3GAP2Q9H2M9 1393 aa12.94□□□□□ -0.34
HDGF-208ENST00000482651 ECM2O94769 699 aaPredicted RBP12.93□□□□□ -0.34
HDGF-208ENST00000482651 C14orf37Q86TY3 774 aa12.93□□□□□ -0.34
HDGF-208ENST00000482651 SLAIN2Q9P270 581 aa12.93□□□□□ -0.34
HDGF-208ENST00000482651 KIF1BO60333 1816 aa12.92□□□□□ -0.34
HDGF-208ENST00000482651 SPRYD3Q8NCJ5 442 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms