RNA–Protein interactions for RNA: ENST00000482250.1

USP34-213, Transcript of ubiquitin specific peptidase 34, humanhuman

TSL 3

Gene USP34, Length 515 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP34-213ENST00000482250 TMEM2Q9UHN6 1383 aa17.62■□□□□ 0.41
USP34-213ENST00000482250 PPARGC1BQ86YN6 1023 aaKnown RBP17.61■□□□□ 0.41
USP34-213ENST00000482250 NPM3O75607 178 aaKnown RBP17.6■□□□□ 0.41
USP34-213ENST00000482250 RNF39Q9H2S5 420 aa17.6■□□□□ 0.41
USP34-213ENST00000482250 IQGAP3Q86VI3 1631 aa17.59■□□□□ 0.41
USP34-213ENST00000482250 RPRD2Q5VT52 1461 aaKnown RBP17.59■□□□□ 0.41
USP34-213ENST00000482250 TOM1O60784 492 aa17.59■□□□□ 0.41
USP34-213ENST00000482250 HSPA1LP34931 641 aa17.59■□□□□ 0.41
USP34-213ENST00000482250 STAG3Q9UJ98 1225 aa17.58■□□□□ 0.4
USP34-213ENST00000482250 TMEM131LA2VDJ0 1609 aa17.58■□□□□ 0.4
USP34-213ENST00000482250 EID1Q9Y6B2 187 aa17.57■□□□□ 0.4
USP34-213ENST00000482250 ROCK1Q13464 1354 aa17.55■□□□□ 0.4
USP34-213ENST00000482250 MED1Q15648 1581 aaPredicted RBP17.54■□□□□ 0.4
USP34-213ENST00000482250 ITGAEP38570 1179 aa17.54■□□□□ 0.4
USP34-213ENST00000482250 CACNB1Q02641 598 aaPredicted RBP17.53■□□□□ 0.4
USP34-213ENST00000482250 ZFYVE9O95405 1425 aa17.52■□□□□ 0.4
USP34-213ENST00000482250 NWD1Q149M9 1564 aa17.52■□□□□ 0.39
USP34-213ENST00000482250 CHD2O14647 1828 aaKnown RBP17.51■□□□□ 0.39
USP34-213ENST00000482250 SLC52A1Q9NWF4 448 aa17.51■□□□□ 0.39
USP34-213ENST00000482250 SLC26A8Q96RN1 970 aa17.5■□□□□ 0.39
USP34-213ENST00000482250 SPHKAPQ2M3C7 1700 aa17.5■□□□□ 0.39
USP34-213ENST00000482250 RIMS2Q9UQ26 1411 aa17.47■□□□□ 0.39
USP34-213ENST00000482250 RBM33Q96EV2 1170 aaKnown RBP17.46■□□□□ 0.39
USP34-213ENST00000482250 NUP155O75694 1391 aa17.45■□□□□ 0.38
USP34-213ENST00000482250 TMEM94Q12767 1356 aa17.45■□□□□ 0.38
USP34-213ENST00000482250 ROBO1Q9Y6N7 1651 aa17.45■□□□□ 0.38
USP34-213ENST00000482250 PLEKHG1Q9ULL1 1385 aa17.44■□□□□ 0.38
USP34-213ENST00000482250 SOCS7O14512 581 aa17.44■□□□□ 0.38
USP34-213ENST00000482250 KCNA6P17658 529 aa17.44■□□□□ 0.38
USP34-213ENST00000482250 NKTRP30414 1462 aaKnown RBP17.44■□□□□ 0.38
USP34-213ENST00000482250 RRBP1Q9P2E9 1410 aaKnown RBP17.43■□□□□ 0.38
USP34-213ENST00000482250 CHGAP10645 457 aaKnown RBP17.42■□□□□ 0.38
USP34-213ENST00000482250 BCANQ96GW7 911 aa17.42■□□□□ 0.38
USP34-213ENST00000482250 NUTM2DQ5VT03 806 aaPredicted RBP17.41■□□□□ 0.38
USP34-213ENST00000482250 PPP1R15AO75807 674 aaPredicted RBP17.4■□□□□ 0.38
USP34-213ENST00000482250 PROSER2Q86WR7 435 aaPredicted RBP17.4■□□□□ 0.38
USP34-213ENST00000482250 CLTCL1P53675 1640 aa17.39■□□□□ 0.38
USP34-213ENST00000482250 NRXN3Q9Y4C0 1643 aa17.39■□□□□ 0.38
USP34-213ENST00000482250 ADAMTS13Q76LX8 1427 aa17.38■□□□□ 0.37
USP34-213ENST00000482250 DIP2AQ14689 1571 aa17.38■□□□□ 0.37
USP34-213ENST00000482250 KIF1BO60333 1816 aa17.37■□□□□ 0.37
USP34-213ENST00000482250 NAIPQ13075 1403 aa17.37■□□□□ 0.37
USP34-213ENST00000482250 FAM135BQ49AJ0 1406 aa17.36■□□□□ 0.37
USP34-213ENST00000482250 PHLPP1O60346 1717 aa17.35■□□□□ 0.37
USP34-213ENST00000482250 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.35■□□□□ 0.37
USP34-213ENST00000482250 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.34■□□□□ 0.37
USP34-213ENST00000482250 TRPM2O94759 1503 aa17.33■□□□□ 0.37
USP34-213ENST00000482250 HDGFP51858 240 aaKnown RBP17.33■□□□□ 0.36
USP34-213ENST00000482250 TBX22Q9Y458 520 aa17.33■□□□□ 0.36
USP34-213ENST00000482250 XRN1Q8IZH2 1706 aaKnown RBP17.33■□□□□ 0.36
USP34-213ENST00000482250 MSH6P52701 1360 aa17.32■□□□□ 0.36
USP34-213ENST00000482250 C1QBPQ07021 282 aaKnown RBP17.32■□□□□ 0.36
USP34-213ENST00000482250 SETBP1Q9Y6X0 1596 aa17.32■□□□□ 0.36
USP34-213ENST00000482250 NEXMIFQ5QGS0 1516 aa17.31■□□□□ 0.36
USP34-213ENST00000482250 PTPRUQ92729 1446 aa17.31■□□□□ 0.36
USP34-213ENST00000482250 KCNA4P22459 653 aa17.31■□□□□ 0.36
USP34-213ENST00000482250 HFM1A2PYH4 1435 aa17.28■□□□□ 0.36
USP34-213ENST00000482250 COL16A1Q07092 1604 aaPredicted RBP17.28■□□□□ 0.36
USP34-213ENST00000482250 PIK3R4Q99570 1358 aa17.28■□□□□ 0.36
USP34-213ENST00000482250 SETD1AO15047 1707 aaKnown RBP17.27■□□□□ 0.36
USP34-213ENST00000482250 SLAIN2Q9P270 581 aa17.26■□□□□ 0.35
USP34-213ENST00000482250 ZNF326Q5BKZ1 582 aaKnown RBP17.25■□□□□ 0.35
USP34-213ENST00000482250 PPLO60437 1756 aa17.25■□□□□ 0.35
USP34-213ENST00000482250 NALCNQ8IZF0 1738 aa17.24■□□□□ 0.35
USP34-213ENST00000482250 NCOA3Q9Y6Q9 1424 aa17.24■□□□□ 0.35
USP34-213ENST00000482250 RGS17Q9UGC6 210 aaPredicted RBP17.24■□□□□ 0.35
USP34-213ENST00000482250 AMOTL2Q9Y2J4 779 aa17.24■□□□□ 0.35
USP34-213ENST00000482250 C14orf37Q86TY3 774 aa17.23■□□□□ 0.35
USP34-213ENST00000482250 TRIM52Q96A61 297 aa17.22■□□□□ 0.35
USP34-213ENST00000482250 METP08581 1390 aa17.22■□□□□ 0.35
USP34-213ENST00000482250 AHDC1Q5TGY3 1603 aaPredicted RBP17.21■□□□□ 0.35
USP34-213ENST00000482250 C19orf44Q9H6X5 657 aa17.19■□□□□ 0.34
USP34-213ENST00000482250 SHPRHQ149N8 1683 aa17.19■□□□□ 0.34
USP34-213ENST00000482250 NHSL1Q5SYE7 1610 aa17.18■□□□□ 0.34
USP34-213ENST00000482250 SLC4A1APQ9BWU0 796 aaKnown RBP17.17■□□□□ 0.34
USP34-213ENST00000482250 IFT172Q9UG01 1749 aa17.17■□□□□ 0.34
USP34-213ENST00000482250 ATF3P18847 181 aa17.16■□□□□ 0.34
USP34-213ENST00000482250 CADPS2Q86UW7 1296 aa17.16■□□□□ 0.34
USP34-213ENST00000482250 JCADQ9P266 1359 aa17.15■□□□□ 0.34
USP34-213ENST00000482250 DCCP43146 1447 aa17.15■□□□□ 0.34
USP34-213ENST00000482250 LRP6O75581 1613 aa17.15■□□□□ 0.34
USP34-213ENST00000482250 ASXL1Q8IXJ9 1541 aa17.15■□□□□ 0.34
USP34-213ENST00000482250 MST1RQ04912 1400 aa17.14■□□□□ 0.33
USP34-213ENST00000482250 POTEAQ6S8J7 498 aa17.13■□□□□ 0.33
USP34-213ENST00000482250 ADGRL3Q9HAR2 1447 aa17.13■□□□□ 0.33
USP34-213ENST00000482250 BRINP3Q76B58 766 aa17.12■□□□□ 0.33
USP34-213ENST00000482250 ROBO2Q9HCK4 1378 aa17.09■□□□□ 0.33
USP34-213ENST00000482250 PTCH1Q13635 1447 aa17.09■□□□□ 0.33
USP34-213ENST00000482250 VGFO15240 615 aaPredicted RBP17.08■□□□□ 0.32
USP34-213ENST00000482250 CCDC144AA2RUR9 1427 aa17.06■□□□□ 0.32
USP34-213ENST00000482250 SPATA31E1Q6ZUB1 1445 aa17.06■□□□□ 0.32
USP34-213ENST00000482250 RPGRIP1LQ68CZ1 1315 aa17.06■□□□□ 0.32
USP34-213ENST00000482250 LAMC1P11047 1609 aa17.06■□□□□ 0.32
USP34-213ENST00000482250 PRAG1Q86YV5 1406 aa17.05■□□□□ 0.32
USP34-213ENST00000482250 SPATA31A6Q5VVP1 1343 aa17.05■□□□□ 0.32
USP34-213ENST00000482250 DDX17Q92841 729 aaKnown RBP17.05■□□□□ 0.32
USP34-213ENST00000482250 MPHOSPH9Q99550 1183 aa17.05■□□□□ 0.32
USP34-213ENST00000482250 KNDC1Q76NI1 1749 aa17.04■□□□□ 0.32
USP34-213ENST00000482250 SETD5Q9C0A6 1442 aa17.04■□□□□ 0.32
USP34-213ENST00000482250 ADGRF5Q8IZF2 1346 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms