RNA–Protein interactions for RNA: ENST00000482162.1

TMEM39A-207, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 554 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-207ENST00000482162 PLEKHG1Q9ULL1 1385 aa14.79□□□□□ -0.04
TMEM39A-207ENST00000482162 RIMS2Q9UQ26 1411 aa14.78□□□□□ -0.04
TMEM39A-207ENST00000482162 SOCS7O14512 581 aa14.78□□□□□ -0.04
TMEM39A-207ENST00000482162 HSPA1LP34931 641 aa14.78□□□□□ -0.04
TMEM39A-207ENST00000482162 TBX22Q9Y458 520 aa14.78□□□□□ -0.04
TMEM39A-207ENST00000482162 PIP4K2BP78356 416 aa14.77□□□□□ -0.05
TMEM39A-207ENST00000482162 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.77□□□□□ -0.05
TMEM39A-207ENST00000482162 HFM1A2PYH4 1435 aa14.75□□□□□ -0.05
TMEM39A-207ENST00000482162 ADAMTS13Q76LX8 1427 aa14.74□□□□□ -0.05
TMEM39A-207ENST00000482162 TMEM94Q12767 1356 aa14.73□□□□□ -0.05
TMEM39A-207ENST00000482162 XIRP1Q702N8 1843 aaKnown RBP14.73□□□□□ -0.05
TMEM39A-207ENST00000482162 MYO5BQ9ULV0 1848 aa14.73□□□□□ -0.05
TMEM39A-207ENST00000482162 NWD1Q149M9 1564 aa14.73□□□□□ -0.05
TMEM39A-207ENST00000482162 SCAF1Q9H7N4 1312 aaKnown RBP14.73□□□□□ -0.05
TMEM39A-207ENST00000482162 NKTRP30414 1462 aaKnown RBP14.72□□□□□ -0.05
TMEM39A-207ENST00000482162 CHGAP10645 457 aaKnown RBP14.71□□□□□ -0.05
TMEM39A-207ENST00000482162 PROSER2Q86WR7 435 aaPredicted RBP14.71□□□□□ -0.05
TMEM39A-207ENST00000482162 FAM135BQ49AJ0 1406 aa14.71□□□□□ -0.05
TMEM39A-207ENST00000482162 PIK3R4Q99570 1358 aa14.71□□□□□ -0.06
TMEM39A-207ENST00000482162 PPP1R15AO75807 674 aaPredicted RBP14.7□□□□□ -0.06
TMEM39A-207ENST00000482162 NCOA3Q9Y6Q9 1424 aa14.69□□□□□ -0.06
TMEM39A-207ENST00000482162 BCANQ96GW7 911 aa14.68□□□□□ -0.06
TMEM39A-207ENST00000482162 SENP3Q9H4L4 574 aaPredicted RBP14.68□□□□□ -0.06
TMEM39A-207ENST00000482162 CHD2O14647 1828 aaKnown RBP14.68□□□□□ -0.06
TMEM39A-207ENST00000482162 SPHKAPQ2M3C7 1700 aa14.67□□□□□ -0.06
TMEM39A-207ENST00000482162 NUTM2DQ5VT03 806 aaPredicted RBP14.67□□□□□ -0.06
TMEM39A-207ENST00000482162 RBM33Q96EV2 1170 aaKnown RBP14.67□□□□□ -0.06
TMEM39A-207ENST00000482162 TRPM2O94759 1503 aa14.66□□□□□ -0.06
TMEM39A-207ENST00000482162 DIP2AQ14689 1571 aa14.65□□□□□ -0.06
TMEM39A-207ENST00000482162 PTPRUQ92729 1446 aa14.64□□□□□ -0.07
TMEM39A-207ENST00000482162 SETBP1Q9Y6X0 1596 aa14.64□□□□□ -0.07
TMEM39A-207ENST00000482162 CLTCL1P53675 1640 aa14.63□□□□□ -0.07
TMEM39A-207ENST00000482162 TRIM52Q96A61 297 aa14.63□□□□□ -0.07
TMEM39A-207ENST00000482162 SLC4A1APQ9BWU0 796 aaKnown RBP14.63□□□□□ -0.07
TMEM39A-207ENST00000482162 SLAIN2Q9P270 581 aa14.63□□□□□ -0.07
TMEM39A-207ENST00000482162 MSH6P52701 1360 aa14.62□□□□□ -0.07
TMEM39A-207ENST00000482162 C19orf44Q9H6X5 657 aa14.62□□□□□ -0.07
TMEM39A-207ENST00000482162 AMOTL2Q9Y2J4 779 aa14.62□□□□□ -0.07
TMEM39A-207ENST00000482162 NRXN3Q9Y4C0 1643 aa14.62□□□□□ -0.07
TMEM39A-207ENST00000482162 MED1Q15648 1581 aaPredicted RBP14.61□□□□□ -0.07
TMEM39A-207ENST00000482162 RPGRIP1LQ68CZ1 1315 aa14.61□□□□□ -0.07
TMEM39A-207ENST00000482162 NEXMIFQ5QGS0 1516 aa14.61□□□□□ -0.07
TMEM39A-207ENST00000482162 METP08581 1390 aa14.6□□□□□ -0.07
TMEM39A-207ENST00000482162 ZNF326Q5BKZ1 582 aaKnown RBP14.6□□□□□ -0.07
TMEM39A-207ENST00000482162 ACIN1Q9UKV3 1341 aaKnown RBP14.6□□□□□ -0.07
TMEM39A-207ENST00000482162 VGFO15240 615 aaPredicted RBP14.58□□□□□ -0.08
TMEM39A-207ENST00000482162 MPHOSPH9Q99550 1183 aa14.58□□□□□ -0.08
TMEM39A-207ENST00000482162 CADPS2Q86UW7 1296 aa14.57□□□□□ -0.08
TMEM39A-207ENST00000482162 PHF23Q9BUL5 403 aaPredicted RBP14.57□□□□□ -0.08
TMEM39A-207ENST00000482162 XRN1Q8IZH2 1706 aaKnown RBP14.56□□□□□ -0.08
TMEM39A-207ENST00000482162 ROBO1Q9Y6N7 1651 aa14.55□□□□□ -0.08
TMEM39A-207ENST00000482162 FOXD1Q16676 465 aa14.55□□□□□ -0.08
TMEM39A-207ENST00000482162 KIF1BO60333 1816 aa14.55□□□□□ -0.08
TMEM39A-207ENST00000482162 DCCP43146 1447 aa14.54□□□□□ -0.08
TMEM39A-207ENST00000482162 SPATA31E1Q6ZUB1 1445 aa14.54□□□□□ -0.08
TMEM39A-207ENST00000482162 PRAG1Q86YV5 1406 aa14.54□□□□□ -0.08
TMEM39A-207ENST00000482162 SETD5Q9C0A6 1442 aa14.53□□□□□ -0.08
TMEM39A-207ENST00000482162 ATF3P18847 181 aa14.53□□□□□ -0.08
TMEM39A-207ENST00000482162 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.52□□□□□ -0.08
TMEM39A-207ENST00000482162 RGS17Q9UGC6 210 aaPredicted RBP14.52□□□□□ -0.09
TMEM39A-207ENST00000482162 C14orf37Q86TY3 774 aa14.51□□□□□ -0.09
TMEM39A-207ENST00000482162 CCDC144AA2RUR9 1427 aa14.49□□□□□ -0.09
TMEM39A-207ENST00000482162 SETD1AO15047 1707 aaKnown RBP14.49□□□□□ -0.09
TMEM39A-207ENST00000482162 HRCP23327 699 aa14.49□□□□□ -0.09
TMEM39A-207ENST00000482162 BRINP3Q76B58 766 aa14.49□□□□□ -0.09
TMEM39A-207ENST00000482162 ADGRL3Q9HAR2 1447 aa14.49□□□□□ -0.09
TMEM39A-207ENST00000482162 ANKRD30BQ9BXX2 1392 aa14.48□□□□□ -0.09
TMEM39A-207ENST00000482162 MST1RQ04912 1400 aa14.48□□□□□ -0.09
TMEM39A-207ENST00000482162 PTCH1Q13635 1447 aa14.48□□□□□ -0.09
TMEM39A-207ENST00000482162 ROBO2Q9HCK4 1378 aa14.47□□□□□ -0.09
TMEM39A-207ENST00000482162 JCADQ9P266 1359 aa14.47□□□□□ -0.09
TMEM39A-207ENST00000482162 PPLO60437 1756 aa14.47□□□□□ -0.09
TMEM39A-207ENST00000482162 ADGRF5Q8IZF2 1346 aa14.47□□□□□ -0.09
TMEM39A-207ENST00000482162 AHDC1Q5TGY3 1603 aaPredicted RBP14.47□□□□□ -0.09
TMEM39A-207ENST00000482162 RAB3GAP2Q9H2M9 1393 aa14.47□□□□□ -0.09
TMEM39A-207ENST00000482162 COL16A1Q07092 1604 aaPredicted RBP14.46□□□□□ -0.09
TMEM39A-207ENST00000482162 RGL3Q3MIN7 710 aa14.45□□□□□ -0.1
TMEM39A-207ENST00000482162 PHLPP1O60346 1717 aa14.44□□□□□ -0.1
TMEM39A-207ENST00000482162 ABCC11Q96J66 1382 aa14.43□□□□□ -0.1
TMEM39A-207ENST00000482162 SPATA31A6Q5VVP1 1343 aa14.42□□□□□ -0.1
TMEM39A-207ENST00000482162 TECPR2O15040 1411 aa14.42□□□□□ -0.1
TMEM39A-207ENST00000482162 PIK3C2GO75747 1445 aa14.41□□□□□ -0.1
TMEM39A-207ENST00000482162 ASXL1Q8IXJ9 1541 aa14.41□□□□□ -0.1
TMEM39A-207ENST00000482162 SIRT1Q96EB6 747 aa14.41□□□□□ -0.1
TMEM39A-207ENST00000482162 C14orf93Q9H972 538 aaKnown RBP14.41□□□□□ -0.1
TMEM39A-207ENST00000482162 LRPPRCP42704 1394 aaKnown RBP14.41□□□□□ -0.1
TMEM39A-207ENST00000482162 NRXN1Q9ULB1 1477 aa14.41□□□□□ -0.1
TMEM39A-207ENST00000482162 IFT172Q9UG01 1749 aa14.41□□□□□ -0.1
TMEM39A-207ENST00000482162 C1orf167Q5SNV9 1468 aa14.4□□□□□ -0.1
TMEM39A-207ENST00000482162 POTEAQ6S8J7 498 aa14.4□□□□□ -0.1
TMEM39A-207ENST00000482162 NALCNQ8IZF0 1738 aa14.4□□□□□ -0.1
TMEM39A-207ENST00000482162 LRRC59Q96AG4 307 aaKnown RBP14.38□□□□□ -0.11
TMEM39A-207ENST00000482162 LAMC1P11047 1609 aa14.37□□□□□ -0.11
TMEM39A-207ENST00000482162 TMEM132EQ6IEE7 984 aa14.37□□□□□ -0.11
TMEM39A-207ENST00000482162 SOS2Q07890 1332 aaPredicted RBP14.37□□□□□ -0.11
TMEM39A-207ENST00000482162 MYOM2P54296 1465 aa14.37□□□□□ -0.11
TMEM39A-207ENST00000482162 LRP6O75581 1613 aa14.37□□□□□ -0.11
TMEM39A-207ENST00000482162 NHSL1Q5SYE7 1610 aa14.37□□□□□ -0.11
TMEM39A-207ENST00000482162 SHPRHQ149N8 1683 aa14.36□□□□□ -0.11
TMEM39A-207ENST00000482162 WAPLQ7Z5K2 1190 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms