RNA–Protein interactions for RNA: ENST00000481812.4

VPS16-207, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 943 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-207ENST00000481812 RGL3Q3MIN7 710 aa30■■■□□ 2.39
VPS16-207ENST00000481812 TIMELESSQ9UNS1 1208 aa30■■■□□ 2.39
VPS16-207ENST00000481812 PPLO60437 1756 aa30■■■□□ 2.39
VPS16-207ENST00000481812 NEXMIFQ5QGS0 1516 aa29.99■■■□□ 2.39
VPS16-207ENST00000481812 RIMS2Q9UQ26 1411 aa29.98■■■□□ 2.39
VPS16-207ENST00000481812 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.98■■■□□ 2.39
VPS16-207ENST00000481812 TONSLQ96HA7 1378 aa29.94■■■□□ 2.38
VPS16-207ENST00000481812 EID1Q9Y6B2 187 aa29.94■■■□□ 2.38
VPS16-207ENST00000481812 ANKLE2Q86XL3 938 aa29.93■■■□□ 2.38
VPS16-207ENST00000481812 VGFO15240 615 aaPredicted RBP29.92■■■□□ 2.38
VPS16-207ENST00000481812 L3MBTL2Q969R5 705 aa29.92■■■□□ 2.38
VPS16-207ENST00000481812 POLR1AO95602 1720 aaPredicted RBP29.91■■■□□ 2.38
VPS16-207ENST00000481812 MYOM2P54296 1465 aa29.91■■■□□ 2.38
VPS16-207ENST00000481812 SCAF11Q99590 1463 aaKnown RBP29.91■■■□□ 2.38
VPS16-207ENST00000481812 HSPA2P54652 639 aa29.9■■■□□ 2.38
VPS16-207ENST00000481812 TXNDC2Q86VQ3 553 aa29.9■■■□□ 2.38
VPS16-207ENST00000481812 LTKP29376 864 aa29.89■■■□□ 2.38
VPS16-207ENST00000481812 DCAF11Q8TEB1 546 aa29.88■■■□□ 2.37
VPS16-207ENST00000481812 MED14O60244 1454 aa29.87■■■□□ 2.37
VPS16-207ENST00000481812 NRXN1Q9ULB1 1477 aa29.85■■■□□ 2.37
VPS16-207ENST00000481812 STRCQ7RTU9 1775 aa29.85■■■□□ 2.37
VPS16-207ENST00000481812 PLEKHG1Q9ULL1 1385 aa29.84■■■□□ 2.37
VPS16-207ENST00000481812 PPP1R15AO75807 674 aaPredicted RBP29.83■■■□□ 2.37
VPS16-207ENST00000481812 ADGRF5Q8IZF2 1346 aa29.8■■■□□ 2.36
VPS16-207ENST00000481812 NUTM2DQ5VT03 806 aaPredicted RBP29.8■■■□□ 2.36
VPS16-207ENST00000481812 KDM2AQ9Y2K7 1162 aa29.8■■■□□ 2.36
VPS16-207ENST00000481812 NCKAP5LQ9HCH0 1330 aa29.79■■■□□ 2.36
VPS16-207ENST00000481812 SETBP1Q9Y6X0 1596 aa29.79■■■□□ 2.36
VPS16-207ENST00000481812 PIK3C2GO75747 1445 aa29.78■■■□□ 2.36
VPS16-207ENST00000481812 IQGAP1P46940 1657 aa29.77■■■□□ 2.36
VPS16-207ENST00000481812 NPHP4O75161 1426 aaPredicted RBP29.77■■■□□ 2.36
VPS16-207ENST00000481812 PRAG1Q86YV5 1406 aa29.76■■■□□ 2.35
VPS16-207ENST00000481812 NRXN3Q9Y4C0 1643 aa29.74■■■□□ 2.35
VPS16-207ENST00000481812 DIP2AQ14689 1571 aa29.73■■■□□ 2.35
VPS16-207ENST00000481812 LAMC1P11047 1609 aa29.72■■■□□ 2.35
VPS16-207ENST00000481812 KIAA1210Q9ULL0 1709 aa29.72■■■□□ 2.35
VPS16-207ENST00000481812 DMRT2Q9Y5R5 561 aa29.72■■■□□ 2.35
VPS16-207ENST00000481812 ADAMTS13Q76LX8 1427 aa29.71■■■□□ 2.35
VPS16-207ENST00000481812 C14orf93Q9H972 538 aaKnown RBP29.69■■■□□ 2.34
VPS16-207ENST00000481812 TBX22Q9Y458 520 aa29.69■■■□□ 2.34
VPS16-207ENST00000481812 ALKQ9UM73 1620 aa29.69■■■□□ 2.34
VPS16-207ENST00000481812 SETD1AO15047 1707 aaKnown RBP29.68■■■□□ 2.34
VPS16-207ENST00000481812 ZEB1P37275 1124 aaPredicted RBP29.66■■■□□ 2.34
VPS16-207ENST00000481812 BCANQ96GW7 911 aa29.66■■■□□ 2.34
VPS16-207ENST00000481812 NBPF8Q3BBV2 869 aa29.65■■■□□ 2.34
VPS16-207ENST00000481812 TRPM1Q7Z4N2 1603 aa29.64■■■□□ 2.34
VPS16-207ENST00000481812 PIK3R4Q99570 1358 aa29.63■■■□□ 2.33
VPS16-207ENST00000481812 CFAP70Q5T0N1 1121 aa29.62■■■□□ 2.33
VPS16-207ENST00000481812 SLC26A8Q96RN1 970 aa29.61■■■□□ 2.33
VPS16-207ENST00000481812 RALGAPBQ86X10 1494 aa29.58■■■□□ 2.33
VPS16-207ENST00000481812 CHD2O14647 1828 aaKnown RBP29.57■■■□□ 2.32
VPS16-207ENST00000481812 ADGRB1O14514 1584 aa29.56■■■□□ 2.32
VPS16-207ENST00000481812 SENP3Q9H4L4 574 aaPredicted RBP29.56■■■□□ 2.32
VPS16-207ENST00000481812 ASXL1Q8IXJ9 1541 aa29.55■■■□□ 2.32
VPS16-207ENST00000481812 METP08581 1390 aa29.54■■■□□ 2.32
VPS16-207ENST00000481812 GPRASP1Q5JY77 1395 aa29.54■■■□□ 2.32
VPS16-207ENST00000481812 NBPF1Q3BBV0 1214 aa29.51■■■□□ 2.31
VPS16-207ENST00000481812 ROCK2O75116 1388 aaKnown RBP29.5■■■□□ 2.31
VPS16-207ENST00000481812 NWD1Q149M9 1564 aa29.49■■■□□ 2.31
VPS16-207ENST00000481812 TMEM132EQ6IEE7 984 aa29.49■■■□□ 2.31
VPS16-207ENST00000481812 LRPPRCP42704 1394 aaKnown RBP29.49■■■□□ 2.31
VPS16-207ENST00000481812 YTHDC2Q9H6S0 1430 aaKnown RBP29.48■■■□□ 2.31
VPS16-207ENST00000481812 KCNA6P17658 529 aa29.48■■■□□ 2.31
VPS16-207ENST00000481812 PTPRUQ92729 1446 aa29.47■■■□□ 2.31
VPS16-207ENST00000481812 KNDC1Q76NI1 1749 aa29.47■■■□□ 2.31
VPS16-207ENST00000481812 XRN1Q8IZH2 1706 aaKnown RBP29.47■■■□□ 2.31
VPS16-207ENST00000481812 ABCC11Q96J66 1382 aa29.47■■■□□ 2.31
VPS16-207ENST00000481812 TECPR2O15040 1411 aa29.45■■■□□ 2.31
VPS16-207ENST00000481812 AMOTL2Q9Y2J4 779 aa29.44■■■□□ 2.3
VPS16-207ENST00000481812 DLC1Q96QB1 1528 aa29.42■■■□□ 2.3
VPS16-207ENST00000481812 SIRT1Q96EB6 747 aa29.42■■■□□ 2.3
VPS16-207ENST00000481812 CARD11Q9BXL7 1154 aa29.42■■■□□ 2.3
VPS16-207ENST00000481812 STRCP1A6NGW2 1772 aa29.41■■■□□ 2.3
VPS16-207ENST00000481812 NKTRP30414 1462 aaKnown RBP29.41■■■□□ 2.3
VPS16-207ENST00000481812 CPS1P31327 1500 aa29.4■■■□□ 2.3
VPS16-207ENST00000481812 PTCH1Q13635 1447 aa29.39■■■□□ 2.3
VPS16-207ENST00000481812 STK26Q9P289 416 aa29.37■■■□□ 2.29
VPS16-207ENST00000481812 ZNF335Q9H4Z2 1342 aaPredicted RBP29.37■■■□□ 2.29
VPS16-207ENST00000481812 ARHGEF28Q8N1W1 1705 aaKnown RBP29.37■■■□□ 2.29
VPS16-207ENST00000481812 FAM135BQ49AJ0 1406 aa29.37■■■□□ 2.29
VPS16-207ENST00000481812 TRAK1Q9UPV9 953 aa29.34■■■□□ 2.29
VPS16-207ENST00000481812 EIF3AQ14152 1382 aaKnown RBP29.32■■■□□ 2.28
VPS16-207ENST00000481812 ROBO2Q9HCK4 1378 aa29.32■■■□□ 2.28
VPS16-207ENST00000481812 LTBP4Q8N2S1 1624 aa29.31■■■□□ 2.28
VPS16-207ENST00000481812 NCOA3Q9Y6Q9 1424 aa29.29■■■□□ 2.28
VPS16-207ENST00000481812 USP47Q96K76 1375 aa29.27■■■□□ 2.28
VPS16-207ENST00000481812 PROSER2Q86WR7 435 aaPredicted RBP29.27■■■□□ 2.28
VPS16-207ENST00000481812 LRRC7Q96NW7 1537 aa29.25■■■□□ 2.27
VPS16-207ENST00000481812 PRAM1Q96QH2 718 aa29.25■■■□□ 2.27
VPS16-207ENST00000481812 EIF4G2P78344 907 aaKnown RBP eCLIP29.24■■■□□ 2.27
VPS16-207ENST00000481812 POGKQ9P215 609 aa29.24■■■□□ 2.27
VPS16-207ENST00000481812 CENPJQ9HC77 1338 aaPredicted RBP29.23■■■□□ 2.27
VPS16-207ENST00000481812 WAPLQ7Z5K2 1190 aa29.23■■■□□ 2.27
VPS16-207ENST00000481812 XIRP1Q702N8 1843 aaKnown RBP29.22■■■□□ 2.27
VPS16-207ENST00000481812 PLEKHH1Q9ULM0 1364 aa29.21■■■□□ 2.27
VPS16-207ENST00000481812 SBNO2Q9Y2G9 1366 aa29.21■■■□□ 2.27
VPS16-207ENST00000481812 QRICH2Q9H0J4 1663 aa29.21■■■□□ 2.27
VPS16-207ENST00000481812 TMEM94Q12767 1356 aa29.2■■■□□ 2.26
VPS16-207ENST00000481812 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.2■■■□□ 2.26
VPS16-207ENST00000481812 SLC24A1O60721 1099 aa29.19■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms