RNA–Protein interactions for RNA: ENST00000481807.3

MECP2-208, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 3

Gene MECP2, Length 436 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-208ENST00000481807 SPINK5Q9NQ38 1064 aaPredicted RBP11.48□□□□□ -0.57
MECP2-208ENST00000481807 A2MP01023 1474 aa11.48□□□□□ -0.57
MECP2-208ENST00000481807 FAM135AQ9P2D6 1515 aa11.48□□□□□ -0.57
MECP2-208ENST00000481807 IQGAP3Q86VI3 1631 aa11.48□□□□□ -0.57
MECP2-208ENST00000481807 EIF2AK4Q9P2K8 1649 aaKnown RBP11.47□□□□□ -0.57
MECP2-208ENST00000481807 PPP1R15AO75807 674 aaPredicted RBP11.47□□□□□ -0.57
MECP2-208ENST00000481807 NEUROD1Q13562 356 aa11.47□□□□□ -0.57
MECP2-208ENST00000481807 ANKLE2Q86XL3 938 aa11.47□□□□□ -0.57
MECP2-208ENST00000481807 NPHP4O75161 1426 aaPredicted RBP11.46□□□□□ -0.57
MECP2-208ENST00000481807 STRCP1A6NGW2 1772 aa11.45□□□□□ -0.58
MECP2-208ENST00000481807 NLRP1Q9C000 1473 aa11.44□□□□□ -0.58
MECP2-208ENST00000481807 FAM135BQ49AJ0 1406 aa11.44□□□□□ -0.58
MECP2-208ENST00000481807 DHX29Q7Z478 1369 aaKnown RBP11.44□□□□□ -0.58
MECP2-208ENST00000481807 TNRQ92752 1358 aa11.44□□□□□ -0.58
MECP2-208ENST00000481807 THEMISQ8N1K5 641 aaPredicted RBP11.44□□□□□ -0.58
MECP2-208ENST00000481807 IQGAP1P46940 1657 aa11.43□□□□□ -0.58
MECP2-208ENST00000481807 GGT6Q6P531 493 aa11.42□□□□□ -0.58
MECP2-208ENST00000481807 PRDM15P57071 1507 aaPredicted RBP11.41□□□□□ -0.58
MECP2-208ENST00000481807 UGGT1Q9NYU2 1555 aa11.41□□□□□ -0.58
MECP2-208ENST00000481807 SETD1AO15047 1707 aaKnown RBP11.4□□□□□ -0.58
MECP2-208ENST00000481807 UPF1Q92900 1129 aaKnown RBP eCLIP11.39□□□□□ -0.59
MECP2-208ENST00000481807 MROH1Q8NDA8 1641 aa11.38□□□□□ -0.59
MECP2-208ENST00000481807 DSG3P32926 999 aa11.38□□□□□ -0.59
MECP2-208ENST00000481807 TET3O43151 1660 aa11.38□□□□□ -0.59
MECP2-208ENST00000481807 ZC3H13Q5T200 1668 aaKnown RBP11.38□□□□□ -0.59
MECP2-208ENST00000481807 KANK1Q14678 1352 aa11.38□□□□□ -0.59
MECP2-208ENST00000481807 LMTK2Q8IWU2 1503 aa11.37□□□□□ -0.59
MECP2-208ENST00000481807 FBXO31Q5XUX0 539 aaPredicted RBP11.37□□□□□ -0.59
MECP2-208ENST00000481807 L3MBTL2Q969R5 705 aa11.37□□□□□ -0.59
MECP2-208ENST00000481807 XIRP1Q702N8 1843 aaKnown RBP11.36□□□□□ -0.59
MECP2-208ENST00000481807 CCDC144AA2RUR9 1427 aa11.35□□□□□ -0.59
MECP2-208ENST00000481807 KIF3BO15066 747 aa11.34□□□□□ -0.59
MECP2-208ENST00000481807 DIEXFQ68CQ4 756 aaKnown RBP11.34□□□□□ -0.59
MECP2-208ENST00000481807 E9PCH4 1651 aa11.33□□□□□ -0.6
MECP2-208ENST00000481807 TRPM2O94759 1503 aa11.33□□□□□ -0.6
MECP2-208ENST00000481807 EFCAB6Q5THR3 1501 aa11.33□□□□□ -0.6
MECP2-208ENST00000481807 ROBO1Q9Y6N7 1651 aa11.31□□□□□ -0.6
MECP2-208ENST00000481807 SCAF11Q99590 1463 aaKnown RBP11.31□□□□□ -0.6
MECP2-208ENST00000481807 CDK12Q9NYV4 1490 aaPredicted RBP11.31□□□□□ -0.6
MECP2-208ENST00000481807 SPHKAPQ2M3C7 1700 aa11.3□□□□□ -0.6
MECP2-208ENST00000481807 ARHGAP23Q9P227 1491 aa11.3□□□□□ -0.6
MECP2-208ENST00000481807 SLIT1O75093 1534 aa11.3□□□□□ -0.6
MECP2-208ENST00000481807 JCADQ9P266 1359 aa11.29□□□□□ -0.6
MECP2-208ENST00000481807 WASHC2CQ9Y4E1 1318 aa11.29□□□□□ -0.6
MECP2-208ENST00000481807 ABCC3O15438 1527 aa11.29□□□□□ -0.6
MECP2-208ENST00000481807 SPATA31E1Q6ZUB1 1445 aa11.28□□□□□ -0.6
MECP2-208ENST00000481807 NBPF8Q3BBV2 869 aa11.28□□□□□ -0.6
MECP2-208ENST00000481807 ZNF772Q68DY9 489 aaPredicted RBP11.28□□□□□ -0.6
MECP2-208ENST00000481807 RALGAPBQ86X10 1494 aa11.27□□□□□ -0.6
MECP2-208ENST00000481807 STAC3Q96MF2 364 aa11.27□□□□□ -0.61
MECP2-208ENST00000481807 ZNF219Q9P2Y4 722 aaPredicted RBP11.27□□□□□ -0.61
MECP2-208ENST00000481807 ARHGAP31Q2M1Z3 1444 aa11.26□□□□□ -0.61
MECP2-208ENST00000481807 UBR1Q8IWV7 1749 aa11.26□□□□□ -0.61
MECP2-208ENST00000481807 SAMD1Q6SPF0 538 aaPredicted RBP11.26□□□□□ -0.61
MECP2-208ENST00000481807 CLTCL1P53675 1640 aa11.26□□□□□ -0.61
MECP2-208ENST00000481807 SPATA31A6Q5VVP1 1343 aa11.26□□□□□ -0.61
MECP2-208ENST00000481807 TMEM94Q12767 1356 aa11.26□□□□□ -0.61
MECP2-208ENST00000481807 CEP152O94986 1710 aa11.26□□□□□ -0.61
MECP2-208ENST00000481807 EIF4G2P78344 907 aaKnown RBP eCLIP11.25□□□□□ -0.61
MECP2-208ENST00000481807 PRAG1Q86YV5 1406 aa11.25□□□□□ -0.61
MECP2-208ENST00000481807 ERVK-7P63135 1459 aa11.25□□□□□ -0.61
MECP2-208ENST00000481807 ABCB7O75027 752 aa11.23□□□□□ -0.61
MECP2-208ENST00000481807 LTKP29376 864 aa11.23□□□□□ -0.61
MECP2-208ENST00000481807 LRP6O75581 1613 aa11.23□□□□□ -0.61
MECP2-208ENST00000481807 COL16A1Q07092 1604 aaPredicted RBP11.23□□□□□ -0.61
MECP2-208ENST00000481807 PHLPP1O60346 1717 aa11.23□□□□□ -0.61
MECP2-208ENST00000481807 KCNA6P17658 529 aa11.22□□□□□ -0.61
MECP2-208ENST00000481807 NOS1P29475 1434 aa11.22□□□□□ -0.61
MECP2-208ENST00000481807 NKTRP30414 1462 aaKnown RBP11.22□□□□□ -0.61
MECP2-208ENST00000481807 LAMC1P11047 1609 aa11.21□□□□□ -0.61
MECP2-208ENST00000481807 GPRASP1Q5JY77 1395 aa11.21□□□□□ -0.61
MECP2-208ENST00000481807 HSPA5P11021 654 aaKnown RBP11.21□□□□□ -0.61
MECP2-208ENST00000481807 RXRBP28702 533 aa11.21□□□□□ -0.61
MECP2-208ENST00000481807 DCAF11Q8TEB1 546 aa11.21□□□□□ -0.61
MECP2-208ENST00000481807 TRPM1Q7Z4N2 1603 aa11.2□□□□□ -0.62
MECP2-208ENST00000481807 NWD1Q149M9 1564 aa11.2□□□□□ -0.62
MECP2-208ENST00000481807 TXNDC2Q86VQ3 553 aa11.2□□□□□ -0.62
MECP2-208ENST00000481807 SLAIN2Q9P270 581 aa11.19□□□□□ -0.62
MECP2-208ENST00000481807 KDM5AP29375 1690 aaKnown RBP11.19□□□□□ -0.62
MECP2-208ENST00000481807 SHPRHQ149N8 1683 aa11.19□□□□□ -0.62
MECP2-208ENST00000481807 PIK3C2BO00750 1634 aa11.19□□□□□ -0.62
MECP2-208ENST00000481807 ADGRB3O60242 1522 aa11.19□□□□□ -0.62
MECP2-208ENST00000481807 MYOM2P54296 1465 aa11.19□□□□□ -0.62
MECP2-208ENST00000481807 KIF1BO60333 1816 aa11.19□□□□□ -0.62
MECP2-208ENST00000481807 EP400Q96L91 3159 aa11.18□□□□□ -0.62
MECP2-208ENST00000481807 TMEM2Q9UHN6 1383 aa11.18□□□□□ -0.62
MECP2-208ENST00000481807 EID1Q9Y6B2 187 aa11.18□□□□□ -0.62
MECP2-208ENST00000481807 MSH6P52701 1360 aa11.17□□□□□ -0.62
MECP2-208ENST00000481807 USP47Q96K76 1375 aa11.17□□□□□ -0.62
MECP2-208ENST00000481807 RGL3Q3MIN7 710 aa11.17□□□□□ -0.62
MECP2-208ENST00000481807 NCOA3Q9Y6Q9 1424 aa11.17□□□□□ -0.62
MECP2-208ENST00000481807 AHDC1Q5TGY3 1603 aaPredicted RBP11.17□□□□□ -0.62
MECP2-208ENST00000481807 KIAA1210Q9ULL0 1709 aa11.16□□□□□ -0.62
MECP2-208ENST00000481807 ZNF326Q5BKZ1 582 aaKnown RBP11.16□□□□□ -0.62
MECP2-208ENST00000481807 KDM2AQ9Y2K7 1162 aa11.16□□□□□ -0.62
MECP2-208ENST00000481807 ROCK2O75116 1388 aaKnown RBP11.16□□□□□ -0.62
MECP2-208ENST00000481807 IFT172Q9UG01 1749 aa11.15□□□□□ -0.62
MECP2-208ENST00000481807 NRXN1Q9ULB1 1477 aa11.15□□□□□ -0.62
MECP2-208ENST00000481807 MYCNP04198 464 aaPredicted RBP11.15□□□□□ -0.62
MECP2-208ENST00000481807 PROSER2Q86WR7 435 aaPredicted RBP11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 147.4 ms