RNA–Protein interactions for RNA: ENST00000481353.5

PDCD4-206, Transcript of programmed cell death 4, humanhuman

TSL 2

Gene PDCD4, Length 1,120 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-206ENST00000481353 PADI6Q6TGC4 694 aa14.49□□□□□ -0.09
PDCD4-206ENST00000481353 TMUB1Q9BVT8 246 aa14.49□□□□□ -0.09
PDCD4-206ENST00000481353 REPIN1Q9BWE0 567 aaKnown RBP14.48□□□□□ -0.09
PDCD4-206ENST00000481353 HCSTQ9UBK5 93 aa14.48□□□□□ -0.09
PDCD4-206ENST00000481353 ONECUT3O60422 494 aaPredicted RBP14.47□□□□□ -0.09
PDCD4-206ENST00000481353 TTC13Q8NBP0 860 aa14.47□□□□□ -0.09
PDCD4-206ENST00000481353 ZFRQ96KR1 1074 aaKnown RBP14.47□□□□□ -0.09
PDCD4-206ENST00000481353 CLCN1P35523 988 aa14.46□□□□□ -0.09
PDCD4-206ENST00000481353 GOLGA8CPA6NN73 597 aa14.44□□□□□ -0.1
PDCD4-206ENST00000481353 PCMTD1Q96MG8 357 aaPredicted RBP14.44□□□□□ -0.1
PDCD4-206ENST00000481353 GPCPD1Q9NPB8 672 aa14.43□□□□□ -0.1
PDCD4-206ENST00000481353 FAM98CQ17RN3 349 aaKnown RBP14.42□□□□□ -0.1
PDCD4-206ENST00000481353 FAM161AQ3B820 660 aa14.42□□□□□ -0.1
PDCD4-206ENST00000481353 SH3D19Q5HYK7 790 aa14.42□□□□□ -0.1
PDCD4-206ENST00000481353 LAPTM4BQ86VI4 370 aa14.42□□□□□ -0.1
PDCD4-206ENST00000481353 NUDT18Q6ZVK8 323 aa14.41□□□□□ -0.1
PDCD4-206ENST00000481353 TATDN2Q93075 761 aa14.41□□□□□ -0.1
PDCD4-206ENST00000481353 PACS2Q86VP3 889 aa14.4□□□□□ -0.1
PDCD4-206ENST00000481353 CERKQ8TCT0 537 aa14.4□□□□□ -0.1
PDCD4-206ENST00000481353 PNMA3Q9UL41 463 aa14.4□□□□□ -0.1
PDCD4-206ENST00000481353 SOWAHBA6NEL2 793 aa14.39□□□□□ -0.11
PDCD4-206ENST00000481353 PHOX2BQ99453 314 aa14.39□□□□□ -0.11
PDCD4-206ENST00000481353 ANKK1Q8NFD2 765 aa14.38□□□□□ -0.11
PDCD4-206ENST00000481353 MDM2Q00987 491 aaPredicted RBP14.37□□□□□ -0.11
PDCD4-206ENST00000481353 UBTFP17480 764 aaKnown RBP14.36□□□□□ -0.11
PDCD4-206ENST00000481353 WBP1LQ9NX94 342 aa14.36□□□□□ -0.11
PDCD4-206ENST00000481353 SSTR3P32745 418 aaPredicted RBP14.35□□□□□ -0.11
PDCD4-206ENST00000481353 SAMD7Q7Z3H4 446 aa14.35□□□□□ -0.11
PDCD4-206ENST00000481353 C1orf115Q9H7X2 142 aa14.35□□□□□ -0.11
PDCD4-206ENST00000481353 RBM27Q9P2N5 1060 aaKnown RBP14.35□□□□□ -0.11
PDCD4-206ENST00000481353 OATP04181 439 aa14.33□□□□□ -0.12
PDCD4-206ENST00000481353 SKIV2LQ15477 1246 aaKnown RBP14.33□□□□□ -0.12
PDCD4-206ENST00000481353 PLA2G2EQ9NZK7 142 aa14.33□□□□□ -0.12
PDCD4-206ENST00000481353 A6NJR5 290 aa14.32□□□□□ -0.12
PDCD4-206ENST00000481353 NBPF26B4DH59 902 aa14.32□□□□□ -0.12
PDCD4-206ENST00000481353 METTL3Q86U44 580 aaKnown RBP14.32□□□□□ -0.12
PDCD4-206ENST00000481353 EYA1Q99502 592 aa14.32□□□□□ -0.12
PDCD4-206ENST00000481353 FAM217BQ9NTX9 383 aaPredicted RBP14.3□□□□□ -0.12
PDCD4-206ENST00000481353 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.29□□□□□ -0.12
PDCD4-206ENST00000481353 HPS5Q9UPZ3 1129 aa14.29□□□□□ -0.12
PDCD4-206ENST00000481353 MCM6Q14566 821 aa14.28□□□□□ -0.12
PDCD4-206ENST00000481353 LRCH3Q96II8 777 aa14.28□□□□□ -0.12
PDCD4-206ENST00000481353 BEGAINQ9BUH8 593 aa14.28□□□□□ -0.12
PDCD4-206ENST00000481353 ADGRG1Q9Y653 693 aa14.28□□□□□ -0.12
PDCD4-206ENST00000481353 APBB1O00213 710 aa14.26□□□□□ -0.13
PDCD4-206ENST00000481353 PXYLP1Q8TE99 480 aa14.26□□□□□ -0.13
PDCD4-206ENST00000481353 ARID3CA6NKF2 412 aa14.24□□□□□ -0.13
PDCD4-206ENST00000481353 SWT1Q5T5J6 900 aaKnown RBP14.24□□□□□ -0.13
PDCD4-206ENST00000481353 CLUAP1Q96AJ1 413 aa14.23□□□□□ -0.13
PDCD4-206ENST00000481353 ARID3AQ99856 593 aa14.23□□□□□ -0.13
PDCD4-206ENST00000481353 TRAK2O60296 914 aa14.22□□□□□ -0.13
PDCD4-206ENST00000481353 TSR3Q9UJK0 312 aaKnown RBP14.22□□□□□ -0.13
PDCD4-206ENST00000481353 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.21□□□□□ -0.13
PDCD4-206ENST00000481353 NLRP7Q8WX94 980 aa14.2□□□□□ -0.14
PDCD4-206ENST00000481353 MYSM1Q5VVJ2 828 aa14.19□□□□□ -0.14
PDCD4-206ENST00000481353 PROCA1Q8NCQ7 364 aaPredicted RBP14.19□□□□□ -0.14
PDCD4-206ENST00000481353 RNF40O75150 1001 aa14.18□□□□□ -0.14
PDCD4-206ENST00000481353 APLP1P51693 650 aa14.16□□□□□ -0.14
PDCD4-206ENST00000481353 DIXDC1Q155Q3 683 aa14.16□□□□□ -0.14
PDCD4-206ENST00000481353 POLR3EQ9NVU0 708 aa14.16□□□□□ -0.14
PDCD4-206ENST00000481353 RCCD1A6NED2 376 aa14.15□□□□□ -0.14
PDCD4-206ENST00000481353 RBM46Q8TBY0 533 aaKnown RBP14.15□□□□□ -0.14
PDCD4-206ENST00000481353 CLK2P49760 499 aaKnown RBP14.14□□□□□ -0.15
PDCD4-206ENST00000481353 PPP4CP60510 307 aa14.14□□□□□ -0.15
PDCD4-206ENST00000481353 TBC1D2Q9BYX2 928 aa14.12□□□□□ -0.15
PDCD4-206ENST00000481353 TMEM134Q9H6X4 195 aa14.12□□□□□ -0.15
PDCD4-206ENST00000481353 SPDYE5A6NIY4 337 aa14.11□□□□□ -0.15
PDCD4-206ENST00000481353 ITGBL1O95965 494 aaPredicted RBP14.11□□□□□ -0.15
PDCD4-206ENST00000481353 PROSER2Q86WR7 435 aaPredicted RBP14.11□□□□□ -0.15
PDCD4-206ENST00000481353 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.1□□□□□ -0.15
PDCD4-206ENST00000481353 FNBP4Q8N3X1 1017 aaPredicted RBP14.1□□□□□ -0.15
PDCD4-206ENST00000481353 BANK1Q8NDB2 785 aa14.1□□□□□ -0.15
PDCD4-206ENST00000481353 ATP1B4Q9UN42 357 aaPredicted RBP14.1□□□□□ -0.15
PDCD4-206ENST00000481353 DNAJB2P25686 324 aa14.09□□□□□ -0.15
PDCD4-206ENST00000481353 CCDC82Q8N4S0 544 aa14.09□□□□□ -0.15
PDCD4-206ENST00000481353 PODXL2Q9NZ53 605 aa14.08□□□□□ -0.16
PDCD4-206ENST00000481353 RAD21O60216 631 aa14.07□□□□□ -0.16
PDCD4-206ENST00000481353 TJAP1Q5JTD0 557 aa14.07□□□□□ -0.16
PDCD4-206ENST00000481353 SLC10A3P09131 477 aa14.06□□□□□ -0.16
PDCD4-206ENST00000481353 RFC5P40937 340 aa14.06□□□□□ -0.16
PDCD4-206ENST00000481353 PPP2R2DQ66LE6 453 aa14.05□□□□□ -0.16
PDCD4-206ENST00000481353 NYAP1Q6ZVC0 841 aa14.05□□□□□ -0.16
PDCD4-206ENST00000481353 ZNF516Q92618 1163 aa14.05□□□□□ -0.16
PDCD4-206ENST00000481353 POM121Q96HA1 1249 aa14.05□□□□□ -0.16
PDCD4-206ENST00000481353 TUSC1Q2TAM9 212 aa14.04□□□□□ -0.16
PDCD4-206ENST00000481353 MTRQ99707 1265 aa14.04□□□□□ -0.16
PDCD4-206ENST00000481353 IFFO2Q5TF58 517 aa14.03□□□□□ -0.16
PDCD4-206ENST00000481353 A0A0G2JS52 829 aa14.02□□□□□ -0.17
PDCD4-206ENST00000481353 CD46P15529 392 aa14.02□□□□□ -0.17
PDCD4-206ENST00000481353 TMEM259Q4ZIN3 620 aa14.02□□□□□ -0.17
PDCD4-206ENST00000481353 SLF2Q8IX21 1173 aa14.02□□□□□ -0.17
PDCD4-206ENST00000481353 SPIRE2Q8WWL2 714 aa14.02□□□□□ -0.17
PDCD4-206ENST00000481353 LIMD1Q9UGP4 676 aa14.02□□□□□ -0.17
PDCD4-206ENST00000481353 TRIM26Q12899 539 aaPredicted RBP14.01□□□□□ -0.17
PDCD4-206ENST00000481353 COG6Q9Y2V7 657 aa14.01□□□□□ -0.17
PDCD4-206ENST00000481353 HDGFP51858 240 aaKnown RBP14□□□□□ -0.17
PDCD4-206ENST00000481353 RIC3Q7Z5B4 369 aa14□□□□□ -0.17
PDCD4-206ENST00000481353 SULF1Q8IWU6 871 aa14□□□□□ -0.17
PDCD4-206ENST00000481353 FBXO31Q5XUX0 539 aaPredicted RBP13.99□□□□□ -0.17
PDCD4-206ENST00000481353 ZNF777Q9ULD5 760 aaPredicted RBP13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms