RNA–Protein interactions for RNA: ENST00000481115.2

PKP4-211, Transcript of plakophilin 4, humanhuman

TSL 5

Gene PKP4, Length 884 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-211ENST00000481115 LRRIQ1Q96JM4 1722 aa9.53□□□□□ -0.88
PKP4-211ENST00000481115 NUP153P49790 1475 aaKnown RBP9.53□□□□□ -0.88
PKP4-211ENST00000481115 HECW1Q76N89 1606 aa9.53□□□□□ -0.88
PKP4-211ENST00000481115 IRF6O14896 467 aa9.52□□□□□ -0.89
PKP4-211ENST00000481115 CASKIN1Q8WXD9 1431 aa9.52□□□□□ -0.89
PKP4-211ENST00000481115 CCDC102AQ96A19 550 aa9.52□□□□□ -0.89
PKP4-211ENST00000481115 PCMTD1Q96MG8 357 aaPredicted RBP9.52□□□□□ -0.89
PKP4-211ENST00000481115 ZCCHC11Q5TAX3 1644 aaKnown RBP9.52□□□□□ -0.89
PKP4-211ENST00000481115 FYCO1Q9BQS8 1478 aa9.52□□□□□ -0.89
PKP4-211ENST00000481115 CENPJQ9HC77 1338 aaPredicted RBP9.52□□□□□ -0.89
PKP4-211ENST00000481115 PAK3O75914 559 aaPredicted RBP9.51□□□□□ -0.89
PKP4-211ENST00000481115 AEBP1Q8IUX7 1158 aa9.51□□□□□ -0.89
PKP4-211ENST00000481115 RGS22Q8NE09 1264 aa9.51□□□□□ -0.89
PKP4-211ENST00000481115 MCM6Q14566 821 aa9.5□□□□□ -0.89
PKP4-211ENST00000481115 PROSER2Q86WR7 435 aaPredicted RBP9.5□□□□□ -0.89
PKP4-211ENST00000481115 CCDC97Q96F63 343 aaPredicted RBP9.5□□□□□ -0.89
PKP4-211ENST00000481115 ZNF777Q9ULD5 760 aaPredicted RBP9.5□□□□□ -0.89
PKP4-211ENST00000481115 MAPKBP1O60336 1514 aa9.5□□□□□ -0.89
PKP4-211ENST00000481115 ATP10BO94823 1461 aa9.49□□□□□ -0.89
PKP4-211ENST00000481115 NEFMP07197 916 aa9.49□□□□□ -0.89
PKP4-211ENST00000481115 MS4A1P11836 297 aa9.49□□□□□ -0.89
PKP4-211ENST00000481115 PDIA6Q15084 440 aa9.49□□□□□ -0.89
PKP4-211ENST00000481115 RBM42Q9BTD8 480 aaKnown RBP9.49□□□□□ -0.89
PKP4-211ENST00000481115 EPRSP07814 1512 aaKnown RBP9.48□□□□□ -0.89
PKP4-211ENST00000481115 MS4A4AQ96JQ5 239 aa9.48□□□□□ -0.89
PKP4-211ENST00000481115 KCNH8Q96L42 1107 aa9.48□□□□□ -0.89
PKP4-211ENST00000481115 CCDC61Q9Y6R9 512 aa9.48□□□□□ -0.89
PKP4-211ENST00000481115 RNF123Q5XPI4 1314 aa9.48□□□□□ -0.89
PKP4-211ENST00000481115 MAP3K1Q13233 1512 aa9.47□□□□□ -0.89
PKP4-211ENST00000481115 DPYSL4O14531 572 aa9.47□□□□□ -0.89
PKP4-211ENST00000481115 PPP1R15BQ5SWA1 713 aa9.47□□□□□ -0.89
PKP4-211ENST00000481115 TMCO4Q5TGY1 634 aa9.47□□□□□ -0.89
PKP4-211ENST00000481115 REM2Q8IYK8 340 aaPredicted RBP9.47□□□□□ -0.89
PKP4-211ENST00000481115 CCDC18Q5T9S5 1454 aa9.47□□□□□ -0.89
PKP4-211ENST00000481115 CDK13Q14004 1512 aaKnown RBP9.46□□□□□ -0.89
PKP4-211ENST00000481115 TCERG1O14776 1098 aaKnown RBP9.46□□□□□ -0.9
PKP4-211ENST00000481115 IFNL1Q8IU54 200 aa9.46□□□□□ -0.9
PKP4-211ENST00000481115 ZBED9Q6R2W3 1325 aa9.46□□□□□ -0.9
PKP4-211ENST00000481115 CFAP43Q8NDM7 1665 aa9.45□□□□□ -0.9
PKP4-211ENST00000481115 FNBP4Q8N3X1 1017 aaPredicted RBP9.45□□□□□ -0.9
PKP4-211ENST00000481115 MTMR7Q9Y216 660 aa9.44□□□□□ -0.9
PKP4-211ENST00000481115 ASXL2Q76L83 1435 aa9.44□□□□□ -0.9
PKP4-211ENST00000481115 KIF13AQ9H1H9 1805 aa9.43□□□□□ -0.9
PKP4-211ENST00000481115 TIAM1Q13009 1591 aa9.43□□□□□ -0.9
PKP4-211ENST00000481115 WDR7Q9Y4E6 1490 aa9.43□□□□□ -0.9
PKP4-211ENST00000481115 GNPATO15228 680 aa9.43□□□□□ -0.9
PKP4-211ENST00000481115 DDX10Q13206 875 aaKnown RBP9.43□□□□□ -0.9
PKP4-211ENST00000481115 TTLL12Q14166 644 aaPredicted RBP9.43□□□□□ -0.9
PKP4-211ENST00000481115 MAGI3Q5TCQ9 1506 aa9.42□□□□□ -0.9
PKP4-211ENST00000481115 SMG6Q86US8 1419 aaKnown RBP9.42□□□□□ -0.9
PKP4-211ENST00000481115 NUTM2FA1L443 756 aa9.42□□□□□ -0.9
PKP4-211ENST00000481115 HSP90AA2PQ14568 343 aaPredicted RBP9.42□□□□□ -0.9
PKP4-211ENST00000481115 TRIM52Q96A61 297 aa9.42□□□□□ -0.9
PKP4-211ENST00000481115 GZF1Q9H116 711 aaPredicted RBP9.42□□□□□ -0.9
PKP4-211ENST00000481115 GPHNQ9NQX3 736 aaPredicted RBP9.42□□□□□ -0.9
PKP4-211ENST00000481115 DIP2BQ9P265 1576 aa9.41□□□□□ -0.9
PKP4-211ENST00000481115 MFAP1P55081 439 aaKnown RBP9.41□□□□□ -0.9
PKP4-211ENST00000481115 SH3D19Q5HYK7 790 aa9.41□□□□□ -0.9
PKP4-211ENST00000481115 EMILIN3Q9NT22 766 aa9.41□□□□□ -0.9
PKP4-211ENST00000481115 GLI2P10070 1586 aa9.41□□□□□ -0.9
PKP4-211ENST00000481115 ABCC10Q5T3U5 1492 aa9.4□□□□□ -0.9
PKP4-211ENST00000481115 POLR1AO95602 1720 aaPredicted RBP9.4□□□□□ -0.9
PKP4-211ENST00000481115 L1TD1Q5T7N2 865 aaKnown RBP9.4□□□□□ -0.9
PKP4-211ENST00000481115 RETREG2Q8NC44 543 aa9.4□□□□□ -0.9
PKP4-211ENST00000481115 ATP1B4Q9UN42 357 aaPredicted RBP9.4□□□□□ -0.9
PKP4-211ENST00000481115 TROQ12816 1431 aaPredicted RBP9.39□□□□□ -0.91
PKP4-211ENST00000481115 CCNB3Q8WWL7 1395 aa9.39□□□□□ -0.91
PKP4-211ENST00000481115 HNRNPUQ00839 825 aaKnown RBP eCLIP9.39□□□□□ -0.91
PKP4-211ENST00000481115 CALD1Q05682 793 aaKnown RBP9.39□□□□□ -0.91
PKP4-211ENST00000481115 HIC1Q14526 733 aa9.39□□□□□ -0.91
PKP4-211ENST00000481115 NCOA2Q15596 1464 aa9.39□□□□□ -0.91
PKP4-211ENST00000481115 ABCA9Q8IUA7 1624 aa9.38□□□□□ -0.91
PKP4-211ENST00000481115 EHBP1L1Q8N3D4 1523 aa9.38□□□□□ -0.91
PKP4-211ENST00000481115 PLEKHD1A6NEE1 506 aa9.38□□□□□ -0.91
PKP4-211ENST00000481115 HSP90AA1P07900 732 aaKnown RBP9.38□□□□□ -0.91
PKP4-211ENST00000481115 NCLP19338 710 aaKnown RBP9.38□□□□□ -0.91
PKP4-211ENST00000481115 FGD1P98174 961 aa9.38□□□□□ -0.91
PKP4-211ENST00000481115 SETD5Q9C0A6 1442 aa9.38□□□□□ -0.91
PKP4-211ENST00000481115 KIF14Q15058 1648 aa9.38□□□□□ -0.91
PKP4-211ENST00000481115 MAP3K4Q9Y6R4 1608 aa9.38□□□□□ -0.91
PKP4-211ENST00000481115 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.37□□□□□ -0.91
PKP4-211ENST00000481115 LRRC9Q6ZRR7 1453 aa9.37□□□□□ -0.91
PKP4-211ENST00000481115 GIGYF2Q6Y7W6 1299 aaKnown RBP9.37□□□□□ -0.91
PKP4-211ENST00000481115 POM121Q96HA1 1249 aa9.37□□□□□ -0.91
PKP4-211ENST00000481115 PLSCR2Q9NRY7 297 aa9.37□□□□□ -0.91
PKP4-211ENST00000481115 FARP1Q9Y4F1 1045 aaPredicted RBP9.37□□□□□ -0.91
PKP4-211ENST00000481115 FCHSD2O94868 740 aa9.36□□□□□ -0.91
PKP4-211ENST00000481115 CLCN1P35523 988 aa9.36□□□□□ -0.91
PKP4-211ENST00000481115 PDCL3Q9H2J4 239 aa9.36□□□□□ -0.91
PKP4-211ENST00000481115 BRPF3Q9ULD4 1205 aa9.36□□□□□ -0.91
PKP4-211ENST00000481115 TTC37Q6PGP7 1564 aa9.36□□□□□ -0.91
PKP4-211ENST00000481115 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.36□□□□□ -0.91
PKP4-211ENST00000481115 MAP3K13O43283 966 aa9.35□□□□□ -0.91
PKP4-211ENST00000481115 IGSF3O75054 1194 aa9.35□□□□□ -0.91
PKP4-211ENST00000481115 RBM25P49756 843 aaKnown RBP9.35□□□□□ -0.91
PKP4-211ENST00000481115 PDE4CQ08493 712 aa9.35□□□□□ -0.91
PKP4-211ENST00000481115 IRF5Q13568 498 aa9.35□□□□□ -0.91
PKP4-211ENST00000481115 SUPT6HQ7KZ85 1726 aaKnown RBP9.35□□□□□ -0.91
PKP4-211ENST00000481115 MAP7D2Q96T17 732 aa9.35□□□□□ -0.91
PKP4-211ENST00000481115 PPRC1Q5VV67 1664 aaKnown RBP9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms