RNA–Protein interactions for RNA: ENST00000480952.1

NDC1-202, Transcript of NDC1 transmembrane nucleoporin, humanhuman

TSL 3

Gene NDC1, Length 785 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-202ENST00000480952 NOS1P29475 1434 aa20.96■□□□□ 0.95
NDC1-202ENST00000480952 APLP2Q06481 763 aa20.96■□□□□ 0.95
NDC1-202ENST00000480952 C14orf37Q86TY3 774 aa20.96■□□□□ 0.95
NDC1-202ENST00000480952 ADGRB3O60242 1522 aa20.94■□□□□ 0.94
NDC1-202ENST00000480952 NWD1Q149M9 1564 aa20.94■□□□□ 0.94
NDC1-202ENST00000480952 ZNF772Q68DY9 489 aaPredicted RBP20.94■□□□□ 0.94
NDC1-202ENST00000480952 PHLPP1O60346 1717 aa20.94■□□□□ 0.94
NDC1-202ENST00000480952 PTPN23Q9H3S7 1636 aa20.93■□□□□ 0.94
NDC1-202ENST00000480952 SPATA31A6Q5VVP1 1343 aa20.93■□□□□ 0.94
NDC1-202ENST00000480952 CROCC2H7BZ55 1655 aa20.93■□□□□ 0.94
NDC1-202ENST00000480952 UPF1Q92900 1129 aaKnown RBP eCLIP20.92■□□□□ 0.94
NDC1-202ENST00000480952 TRIM52Q96A61 297 aa20.92■□□□□ 0.94
NDC1-202ENST00000480952 PLEKHG1Q9ULL1 1385 aa20.92■□□□□ 0.94
NDC1-202ENST00000480952 SETD1AO15047 1707 aaKnown RBP20.92■□□□□ 0.94
NDC1-202ENST00000480952 TBX22Q9Y458 520 aa20.9■□□□□ 0.94
NDC1-202ENST00000480952 ATF3P18847 181 aa20.89■□□□□ 0.93
NDC1-202ENST00000480952 CADPS2Q86UW7 1296 aa20.89■□□□□ 0.93
NDC1-202ENST00000480952 FGD6Q6ZV73 1430 aa20.88■□□□□ 0.93
NDC1-202ENST00000480952 RIMS2Q9UQ26 1411 aa20.88■□□□□ 0.93
NDC1-202ENST00000480952 ZFYVE9O95405 1425 aa20.87■□□□□ 0.93
NDC1-202ENST00000480952 NCOA3Q9Y6Q9 1424 aa20.87■□□□□ 0.93
NDC1-202ENST00000480952 CHGAP10645 457 aaKnown RBP20.87■□□□□ 0.93
NDC1-202ENST00000480952 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.87■□□□□ 0.93
NDC1-202ENST00000480952 C19orf44Q9H6X5 657 aa20.87■□□□□ 0.93
NDC1-202ENST00000480952 LRP6O75581 1613 aa20.86■□□□□ 0.93
NDC1-202ENST00000480952 RXRBP28702 533 aa20.86■□□□□ 0.93
NDC1-202ENST00000480952 COL16A1Q07092 1604 aaPredicted RBP20.86■□□□□ 0.93
NDC1-202ENST00000480952 RPRD2Q5VT52 1461 aaKnown RBP20.84■□□□□ 0.93
NDC1-202ENST00000480952 NUTM2DQ5VT03 806 aaPredicted RBP20.84■□□□□ 0.93
NDC1-202ENST00000480952 NUTM2BA6NNL0 878 aaPredicted RBP20.83■□□□□ 0.93
NDC1-202ENST00000480952 NUTM2EB1AL46 878 aaPredicted RBP20.83■□□□□ 0.93
NDC1-202ENST00000480952 NUTM2AQ8IVF1 878 aaPredicted RBP20.83■□□□□ 0.93
NDC1-202ENST00000480952 CHD2O14647 1828 aaKnown RBP20.82■□□□□ 0.92
NDC1-202ENST00000480952 FAM50AQ14320 339 aaKnown RBP20.8■□□□□ 0.92
NDC1-202ENST00000480952 ANKRD50Q9ULJ7 1429 aa20.79■□□□□ 0.92
NDC1-202ENST00000480952 BRINP3Q76B58 766 aa20.78■□□□□ 0.92
NDC1-202ENST00000480952 AMOTL2Q9Y2J4 779 aa20.78■□□□□ 0.92
NDC1-202ENST00000480952 ADAMTS13Q76LX8 1427 aa20.78■□□□□ 0.92
NDC1-202ENST00000480952 ADGRL2O95490 1459 aa20.77■□□□□ 0.92
NDC1-202ENST00000480952 PIK3R4Q99570 1358 aa20.77■□□□□ 0.92
NDC1-202ENST00000480952 AHDC1Q5TGY3 1603 aaPredicted RBP20.77■□□□□ 0.92
NDC1-202ENST00000480952 TMEM131LA2VDJ0 1609 aa20.76■□□□□ 0.91
NDC1-202ENST00000480952 AFF2P51816 1311 aa20.75■□□□□ 0.91
NDC1-202ENST00000480952 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.74■□□□□ 0.91
NDC1-202ENST00000480952 GCC2Q8IWJ2 1684 aa20.73■□□□□ 0.91
NDC1-202ENST00000480952 MYO5BQ9ULV0 1848 aa20.73■□□□□ 0.91
NDC1-202ENST00000480952 SHPRHQ149N8 1683 aa20.73■□□□□ 0.91
NDC1-202ENST00000480952 CDK12Q9NYV4 1490 aaPredicted RBP20.71■□□□□ 0.91
NDC1-202ENST00000480952 LRRC59Q96AG4 307 aaKnown RBP20.7■□□□□ 0.9
NDC1-202ENST00000480952 DIP2AQ14689 1571 aa20.7■□□□□ 0.9
NDC1-202ENST00000480952 C8orf37Q96NL8 207 aa20.69■□□□□ 0.9
NDC1-202ENST00000480952 QTRT2Q9H974 415 aaKnown RBP20.69■□□□□ 0.9
NDC1-202ENST00000480952 PTPRUQ92729 1446 aa20.68■□□□□ 0.9
NDC1-202ENST00000480952 TRPM2O94759 1503 aa20.68■□□□□ 0.9
NDC1-202ENST00000480952 RBM6P78332 1123 aaKnown RBP20.67■□□□□ 0.9
NDC1-202ENST00000480952 SETD5Q9C0A6 1442 aa20.67■□□□□ 0.9
NDC1-202ENST00000480952 DCCP43146 1447 aa20.66■□□□□ 0.9
NDC1-202ENST00000480952 ASXL1Q8IXJ9 1541 aa20.65■□□□□ 0.9
NDC1-202ENST00000480952 DDX17Q92841 729 aaKnown RBP20.63■□□□□ 0.89
NDC1-202ENST00000480952 MST1RQ04912 1400 aa20.62■□□□□ 0.89
NDC1-202ENST00000480952 NGLY1Q96IV0 654 aa20.62■□□□□ 0.89
NDC1-202ENST00000480952 ZNF326Q5BKZ1 582 aaKnown RBP20.61■□□□□ 0.89
NDC1-202ENST00000480952 RGS12O14924 1447 aa20.61■□□□□ 0.89
NDC1-202ENST00000480952 NUP155O75694 1391 aa20.6■□□□□ 0.89
NDC1-202ENST00000480952 ADAMTS2O95450 1211 aa20.6■□□□□ 0.89
NDC1-202ENST00000480952 E9PCH4 1651 aa20.6■□□□□ 0.89
NDC1-202ENST00000480952 PNPLA6Q8IY17 1366 aa20.59■□□□□ 0.89
NDC1-202ENST00000480952 UNC13BO14795 1591 aa20.59■□□□□ 0.89
NDC1-202ENST00000480952 SRCAPQ6ZRS2 3230 aa20.58■□□□□ 0.88
NDC1-202ENST00000480952 METP08581 1390 aa20.58■□□□□ 0.88
NDC1-202ENST00000480952 ROCK1Q13464 1354 aa20.55■□□□□ 0.88
NDC1-202ENST00000480952 NHSL1Q5SYE7 1610 aa20.54■□□□□ 0.88
NDC1-202ENST00000480952 FOXD1Q16676 465 aa20.54■□□□□ 0.88
NDC1-202ENST00000480952 ADGRL3Q9HAR2 1447 aa20.53■□□□□ 0.88
NDC1-202ENST00000480952 USP21Q9UK80 565 aa20.53■□□□□ 0.88
NDC1-202ENST00000480952 ATAD2Q6PL18 1390 aa20.53■□□□□ 0.88
NDC1-202ENST00000480952 XRN1Q8IZH2 1706 aaKnown RBP20.53■□□□□ 0.88
NDC1-202ENST00000480952 IQGAP3Q86VI3 1631 aa20.53■□□□□ 0.88
NDC1-202ENST00000480952 SETBP1Q9Y6X0 1596 aa20.52■□□□□ 0.88
NDC1-202ENST00000480952 ITGAEP38570 1179 aa20.51■□□□□ 0.87
NDC1-202ENST00000480952 TRPC5Q9UL62 973 aaPredicted RBP20.51■□□□□ 0.87
NDC1-202ENST00000480952 NRXN3Q9Y4C0 1643 aa20.5■□□□□ 0.87
NDC1-202ENST00000480952 ZRANB1Q9UGI0 708 aa20.5■□□□□ 0.87
NDC1-202ENST00000480952 C1orf167Q5SNV9 1468 aa20.49■□□□□ 0.87
NDC1-202ENST00000480952 ORAI2Q96SN7 254 aa20.48■□□□□ 0.87
NDC1-202ENST00000480952 FNBP4Q8N3X1 1017 aaPredicted RBP20.47■□□□□ 0.87
NDC1-202ENST00000480952 SOS2Q07890 1332 aaPredicted RBP20.47■□□□□ 0.87
NDC1-202ENST00000480952 PTCH1Q13635 1447 aa20.43■□□□□ 0.86
NDC1-202ENST00000480952 CCDC125Q86Z20 511 aa20.42■□□□□ 0.86
NDC1-202ENST00000480952 NALCNQ8IZF0 1738 aa20.41■□□□□ 0.86
NDC1-202ENST00000480952 VGFO15240 615 aaPredicted RBP20.4■□□□□ 0.86
NDC1-202ENST00000480952 ATRNO75882 1429 aa20.39■□□□□ 0.85
NDC1-202ENST00000480952 ROBO2Q9HCK4 1378 aa20.39■□□□□ 0.85
NDC1-202ENST00000480952 NEXMIFQ5QGS0 1516 aa20.38■□□□□ 0.85
NDC1-202ENST00000480952 SPHKAPQ2M3C7 1700 aa20.38■□□□□ 0.85
NDC1-202ENST00000480952 ESCO1Q5FWF5 840 aa20.37■□□□□ 0.85
NDC1-202ENST00000480952 LAMC1P11047 1609 aa20.35■□□□□ 0.85
NDC1-202ENST00000480952 NPHP3Q7Z494 1330 aa20.35■□□□□ 0.85
NDC1-202ENST00000480952 GJD4Q96KN9 370 aaPredicted RBP20.35■□□□□ 0.85
NDC1-202ENST00000480952 BCL9LQ86UU0 1499 aa20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms