RNA–Protein interactions for RNA: ENST00000480713.1

NDUFA3-211, Transcript of NADH:ubiquinone oxidoreductase subunit A3, humanhuman

TSL 2

Gene NDUFA3, Length 282 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3-211ENST00000480713 PTPN23Q9H3S7 1636 aa10.55□□□□□ -0.72
NDUFA3-211ENST00000480713 KDM5AP29375 1690 aaKnown RBP10.55□□□□□ -0.72
NDUFA3-211ENST00000480713 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.55□□□□□ -0.72
NDUFA3-211ENST00000480713 NCOA3Q9Y6Q9 1424 aa10.55□□□□□ -0.72
NDUFA3-211ENST00000480713 NKTRP30414 1462 aaKnown RBP10.55□□□□□ -0.72
NDUFA3-211ENST00000480713 ZFYVE9O95405 1425 aa10.54□□□□□ -0.72
NDUFA3-211ENST00000480713 C19orf44Q9H6X5 657 aa10.54□□□□□ -0.72
NDUFA3-211ENST00000480713 PPP1R15AO75807 674 aaPredicted RBP10.53□□□□□ -0.72
NDUFA3-211ENST00000480713 RPRD2Q5VT52 1461 aaKnown RBP10.53□□□□□ -0.72
NDUFA3-211ENST00000480713 ROBO1Q9Y6N7 1651 aa10.53□□□□□ -0.72
NDUFA3-211ENST00000480713 SPATA31A6Q5VVP1 1343 aa10.53□□□□□ -0.72
NDUFA3-211ENST00000480713 RIMS2Q9UQ26 1411 aa10.52□□□□□ -0.73
NDUFA3-211ENST00000480713 FAM50AQ14320 339 aaKnown RBP10.52□□□□□ -0.73
NDUFA3-211ENST00000480713 ZNF772Q68DY9 489 aaPredicted RBP10.52□□□□□ -0.73
NDUFA3-211ENST00000480713 CADPS2Q86UW7 1296 aa10.52□□□□□ -0.73
NDUFA3-211ENST00000480713 ADGRL2O95490 1459 aa10.52□□□□□ -0.73
NDUFA3-211ENST00000480713 ADGRB3O60242 1522 aa10.52□□□□□ -0.73
NDUFA3-211ENST00000480713 NWD1Q149M9 1564 aa10.52□□□□□ -0.73
NDUFA3-211ENST00000480713 ANKRD50Q9ULJ7 1429 aa10.51□□□□□ -0.73
NDUFA3-211ENST00000480713 CHGAP10645 457 aaKnown RBP10.51□□□□□ -0.73
NDUFA3-211ENST00000480713 ATF3P18847 181 aa10.5□□□□□ -0.73
NDUFA3-211ENST00000480713 NUTM2DQ5VT03 806 aaPredicted RBP10.5□□□□□ -0.73
NDUFA3-211ENST00000480713 C14orf37Q86TY3 774 aa10.5□□□□□ -0.73
NDUFA3-211ENST00000480713 UPF1Q92900 1129 aaKnown RBP eCLIP10.5□□□□□ -0.73
NDUFA3-211ENST00000480713 AMOTL2Q9Y2J4 779 aa10.5□□□□□ -0.73
NDUFA3-211ENST00000480713 CROCC2H7BZ55 1655 aa10.5□□□□□ -0.73
NDUFA3-211ENST00000480713 PIK3R4Q99570 1358 aa10.5□□□□□ -0.73
NDUFA3-211ENST00000480713 ADAMTS13Q76LX8 1427 aa10.5□□□□□ -0.73
NDUFA3-211ENST00000480713 RXRBP28702 533 aa10.48□□□□□ -0.73
NDUFA3-211ENST00000480713 MEX3CQ5U5Q3 659 aaKnown RBP10.48□□□□□ -0.73
NDUFA3-211ENST00000480713 BRINP3Q76B58 766 aa10.48□□□□□ -0.73
NDUFA3-211ENST00000480713 TRIM52Q96A61 297 aa10.46□□□□□ -0.73
NDUFA3-211ENST00000480713 TMEM131LA2VDJ0 1609 aa10.46□□□□□ -0.74
NDUFA3-211ENST00000480713 LRP6O75581 1613 aa10.46□□□□□ -0.74
NDUFA3-211ENST00000480713 CHD2O14647 1828 aaKnown RBP10.45□□□□□ -0.74
NDUFA3-211ENST00000480713 PHLPP1O60346 1717 aa10.45□□□□□ -0.74
NDUFA3-211ENST00000480713 PTPRUQ92729 1446 aa10.45□□□□□ -0.74
NDUFA3-211ENST00000480713 COL16A1Q07092 1604 aaPredicted RBP10.44□□□□□ -0.74
NDUFA3-211ENST00000480713 ROCK1Q13464 1354 aa10.44□□□□□ -0.74
NDUFA3-211ENST00000480713 NUTM2BA6NNL0 878 aaPredicted RBP10.44□□□□□ -0.74
NDUFA3-211ENST00000480713 NUTM2EB1AL46 878 aaPredicted RBP10.44□□□□□ -0.74
NDUFA3-211ENST00000480713 NUTM2AQ8IVF1 878 aaPredicted RBP10.44□□□□□ -0.74
NDUFA3-211ENST00000480713 LRRC59Q96AG4 307 aaKnown RBP10.44□□□□□ -0.74
NDUFA3-211ENST00000480713 NUP155O75694 1391 aa10.43□□□□□ -0.74
NDUFA3-211ENST00000480713 AHDC1Q5TGY3 1603 aaPredicted RBP10.42□□□□□ -0.74
NDUFA3-211ENST00000480713 SETD5Q9C0A6 1442 aa10.41□□□□□ -0.74
NDUFA3-211ENST00000480713 AFF2P51816 1311 aa10.41□□□□□ -0.74
NDUFA3-211ENST00000480713 QTRT2Q9H974 415 aaKnown RBP10.41□□□□□ -0.74
NDUFA3-211ENST00000480713 DCCP43146 1447 aa10.41□□□□□ -0.74
NDUFA3-211ENST00000480713 DIP2AQ14689 1571 aa10.4□□□□□ -0.74
NDUFA3-211ENST00000480713 METP08581 1390 aa10.39□□□□□ -0.75
NDUFA3-211ENST00000480713 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.39□□□□□ -0.75
NDUFA3-211ENST00000480713 CDK12Q9NYV4 1490 aaPredicted RBP10.39□□□□□ -0.75
NDUFA3-211ENST00000480713 RBM6P78332 1123 aaKnown RBP10.39□□□□□ -0.75
NDUFA3-211ENST00000480713 ZNF326Q5BKZ1 582 aaKnown RBP10.39□□□□□ -0.75
NDUFA3-211ENST00000480713 DDX17Q92841 729 aaKnown RBP10.39□□□□□ -0.75
NDUFA3-211ENST00000480713 MST1RQ04912 1400 aa10.39□□□□□ -0.75
NDUFA3-211ENST00000480713 C8orf37Q96NL8 207 aa10.38□□□□□ -0.75
NDUFA3-211ENST00000480713 UNC13BO14795 1591 aa10.38□□□□□ -0.75
NDUFA3-211ENST00000480713 TRPM2O94759 1503 aa10.38□□□□□ -0.75
NDUFA3-211ENST00000480713 GCC2Q8IWJ2 1684 aa10.38□□□□□ -0.75
NDUFA3-211ENST00000480713 ITGAEP38570 1179 aa10.37□□□□□ -0.75
NDUFA3-211ENST00000480713 SETD1AO15047 1707 aaKnown RBP10.36□□□□□ -0.75
NDUFA3-211ENST00000480713 SRCAPQ6ZRS2 3230 aa10.36□□□□□ -0.75
NDUFA3-211ENST00000480713 MYO5BQ9ULV0 1848 aa10.36□□□□□ -0.75
NDUFA3-211ENST00000480713 NGLY1Q96IV0 654 aa10.36□□□□□ -0.75
NDUFA3-211ENST00000480713 E9PCH4 1651 aa10.36□□□□□ -0.75
NDUFA3-211ENST00000480713 SHPRHQ149N8 1683 aa10.36□□□□□ -0.75
NDUFA3-211ENST00000480713 ASXL1Q8IXJ9 1541 aa10.36□□□□□ -0.75
NDUFA3-211ENST00000480713 PNPLA6Q8IY17 1366 aa10.36□□□□□ -0.75
NDUFA3-211ENST00000480713 SOS2Q07890 1332 aaPredicted RBP10.34□□□□□ -0.75
NDUFA3-211ENST00000480713 IQGAP3Q86VI3 1631 aa10.34□□□□□ -0.75
NDUFA3-211ENST00000480713 VGFO15240 615 aaPredicted RBP10.34□□□□□ -0.75
NDUFA3-211ENST00000480713 ADAMTS2O95450 1211 aa10.34□□□□□ -0.75
NDUFA3-211ENST00000480713 FNBP4Q8N3X1 1017 aaPredicted RBP10.34□□□□□ -0.75
NDUFA3-211ENST00000480713 ORAI2Q96SN7 254 aa10.34□□□□□ -0.75
NDUFA3-211ENST00000480713 SETBP1Q9Y6X0 1596 aa10.34□□□□□ -0.75
NDUFA3-211ENST00000480713 ADGRL3Q9HAR2 1447 aa10.33□□□□□ -0.76
NDUFA3-211ENST00000480713 C1orf167Q5SNV9 1468 aa10.32□□□□□ -0.76
NDUFA3-211ENST00000480713 USP21Q9UK80 565 aa10.32□□□□□ -0.76
NDUFA3-211ENST00000480713 NRXN3Q9Y4C0 1643 aa10.32□□□□□ -0.76
NDUFA3-211ENST00000480713 RGS12O14924 1447 aa10.32□□□□□ -0.76
NDUFA3-211ENST00000480713 TRPC5Q9UL62 973 aaPredicted RBP10.31□□□□□ -0.76
NDUFA3-211ENST00000480713 RPGRIP1LQ68CZ1 1315 aa10.31□□□□□ -0.76
NDUFA3-211ENST00000480713 XRN1Q8IZH2 1706 aaKnown RBP10.3□□□□□ -0.76
NDUFA3-211ENST00000480713 ROBO2Q9HCK4 1378 aa10.3□□□□□ -0.76
NDUFA3-211ENST00000480713 PPARGC1BQ86YN6 1023 aaKnown RBP10.3□□□□□ -0.76
NDUFA3-211ENST00000480713 NHSL1Q5SYE7 1610 aa10.29□□□□□ -0.76
NDUFA3-211ENST00000480713 CCDC125Q86Z20 511 aa10.28□□□□□ -0.76
NDUFA3-211ENST00000480713 NEXMIFQ5QGS0 1516 aa10.28□□□□□ -0.76
NDUFA3-211ENST00000480713 ATAD2Q6PL18 1390 aa10.27□□□□□ -0.76
NDUFA3-211ENST00000480713 PTCH1Q13635 1447 aa10.27□□□□□ -0.77
NDUFA3-211ENST00000480713 ESCO1Q5FWF5 840 aa10.27□□□□□ -0.77
NDUFA3-211ENST00000480713 FOXD1Q16676 465 aa10.26□□□□□ -0.77
NDUFA3-211ENST00000480713 ZRANB1Q9UGI0 708 aa10.26□□□□□ -0.77
NDUFA3-211ENST00000480713 ATRNO75882 1429 aa10.25□□□□□ -0.77
NDUFA3-211ENST00000480713 PRAG1Q86YV5 1406 aa10.25□□□□□ -0.77
NDUFA3-211ENST00000480713 FOXO3O43524 673 aa10.25□□□□□ -0.77
NDUFA3-211ENST00000480713 GJD4Q96KN9 370 aaPredicted RBP10.25□□□□□ -0.77
NDUFA3-211ENST00000480713 NPHP3Q7Z494 1330 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms