RNA–Protein interactions for RNA: ENST00000480615.1

SNRNP200-204, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 5

Gene SNRNP200, Length 1,646 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-204ENST00000480615 EID1Q9Y6B2 187 aa19.64■□□□□ 0.73
SNRNP200-204ENST00000480615 ARHGAP23Q9P227 1491 aa19.63■□□□□ 0.73
SNRNP200-204ENST00000480615 PPP1R15AO75807 674 aaPredicted RBP19.63■□□□□ 0.73
SNRNP200-204ENST00000480615 NEUROD1Q13562 356 aa19.63■□□□□ 0.73
SNRNP200-204ENST00000480615 SCAF11Q99590 1463 aaKnown RBP19.62■□□□□ 0.73
SNRNP200-204ENST00000480615 NEURL4Q96JN8 1562 aa19.61■□□□□ 0.73
SNRNP200-204ENST00000480615 ZFYVE9O95405 1425 aa19.61■□□□□ 0.73
SNRNP200-204ENST00000480615 SPATA31E1Q6ZUB1 1445 aa19.61■□□□□ 0.73
SNRNP200-204ENST00000480615 BCANQ96GW7 911 aa19.61■□□□□ 0.73
SNRNP200-204ENST00000480615 CCER1Q8TC90 406 aaPredicted RBP19.6■□□□□ 0.73
SNRNP200-204ENST00000480615 NEXMIFQ5QGS0 1516 aa19.59■□□□□ 0.73
SNRNP200-204ENST00000480615 IQGAP1P46940 1657 aa19.58■□□□□ 0.72
SNRNP200-204ENST00000480615 PPLO60437 1756 aa19.57■□□□□ 0.72
SNRNP200-204ENST00000480615 HDGFP51858 240 aaKnown RBP19.57■□□□□ 0.72
SNRNP200-204ENST00000480615 NPHP4O75161 1426 aaPredicted RBP19.57■□□□□ 0.72
SNRNP200-204ENST00000480615 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.56■□□□□ 0.72
SNRNP200-204ENST00000480615 IFT172Q9UG01 1749 aa19.54■□□□□ 0.72
SNRNP200-204ENST00000480615 KDM2AQ9Y2K7 1162 aa19.54■□□□□ 0.72
SNRNP200-204ENST00000480615 DMRT2Q9Y5R5 561 aa19.54■□□□□ 0.72
SNRNP200-204ENST00000480615 SLC26A8Q96RN1 970 aa19.53■□□□□ 0.72
SNRNP200-204ENST00000480615 MED14O60244 1454 aa19.53■□□□□ 0.72
SNRNP200-204ENST00000480615 RPGRIP1LQ68CZ1 1315 aa19.52■□□□□ 0.72
SNRNP200-204ENST00000480615 DCAF11Q8TEB1 546 aa19.52■□□□□ 0.72
SNRNP200-204ENST00000480615 PLEKHG1Q9ULL1 1385 aa19.51■□□□□ 0.71
SNRNP200-204ENST00000480615 VGFO15240 615 aaPredicted RBP19.51■□□□□ 0.71
SNRNP200-204ENST00000480615 ADGRF5Q8IZF2 1346 aa19.49■□□□□ 0.71
SNRNP200-204ENST00000480615 NRXN3Q9Y4C0 1643 aa19.47■□□□□ 0.71
SNRNP200-204ENST00000480615 L3MBTL2Q969R5 705 aa19.46■□□□□ 0.71
SNRNP200-204ENST00000480615 ZNF335Q9H4Z2 1342 aaPredicted RBP19.45■□□□□ 0.7
SNRNP200-204ENST00000480615 SETBP1Q9Y6X0 1596 aa19.44■□□□□ 0.7
SNRNP200-204ENST00000480615 TONSLQ96HA7 1378 aa19.44■□□□□ 0.7
SNRNP200-204ENST00000480615 ADAMTS13Q76LX8 1427 aa19.44■□□□□ 0.7
SNRNP200-204ENST00000480615 MYOM2P54296 1465 aa19.43■□□□□ 0.7
SNRNP200-204ENST00000480615 CLSPNQ9HAW4 1339 aa19.41■□□□□ 0.7
SNRNP200-204ENST00000480615 ALKQ9UM73 1620 aa19.4■□□□□ 0.7
SNRNP200-204ENST00000480615 PIK3C2GO75747 1445 aa19.4■□□□□ 0.7
SNRNP200-204ENST00000480615 DIP2AQ14689 1571 aa19.39■□□□□ 0.69
SNRNP200-204ENST00000480615 TBX22Q9Y458 520 aa19.39■□□□□ 0.69
SNRNP200-204ENST00000480615 STRCP1A6NGW2 1772 aa19.39■□□□□ 0.69
SNRNP200-204ENST00000480615 METP08581 1390 aa19.38■□□□□ 0.69
SNRNP200-204ENST00000480615 SETD1AO15047 1707 aaKnown RBP19.38■□□□□ 0.69
SNRNP200-204ENST00000480615 CFAP70Q5T0N1 1121 aa19.38■□□□□ 0.69
SNRNP200-204ENST00000480615 NRXN1Q9ULB1 1477 aa19.38■□□□□ 0.69
SNRNP200-204ENST00000480615 TMEM132EQ6IEE7 984 aa19.36■□□□□ 0.69
SNRNP200-204ENST00000480615 CHD2O14647 1828 aaKnown RBP19.36■□□□□ 0.69
SNRNP200-204ENST00000480615 PRAG1Q86YV5 1406 aa19.34■□□□□ 0.69
SNRNP200-204ENST00000480615 PTPRUQ92729 1446 aa19.33■□□□□ 0.69
SNRNP200-204ENST00000480615 STAC3Q96MF2 364 aa19.33■□□□□ 0.69
SNRNP200-204ENST00000480615 LAMC1P11047 1609 aa19.33■□□□□ 0.69
SNRNP200-204ENST00000480615 RBM33Q96EV2 1170 aaKnown RBP19.33■□□□□ 0.68
SNRNP200-204ENST00000480615 C14orf93Q9H972 538 aaKnown RBP19.33■□□□□ 0.68
SNRNP200-204ENST00000480615 STK26Q9P289 416 aa19.33■□□□□ 0.68
SNRNP200-204ENST00000480615 LTBP4Q8N2S1 1624 aa19.32■□□□□ 0.68
SNRNP200-204ENST00000480615 KCNA6P17658 529 aa19.32■□□□□ 0.68
SNRNP200-204ENST00000480615 AMOTL2Q9Y2J4 779 aa19.32■□□□□ 0.68
SNRNP200-204ENST00000480615 ASXL1Q8IXJ9 1541 aa19.31■□□□□ 0.68
SNRNP200-204ENST00000480615 NWD1Q149M9 1564 aa19.3■□□□□ 0.68
SNRNP200-204ENST00000480615 NBPF8Q3BBV2 869 aa19.29■□□□□ 0.68
SNRNP200-204ENST00000480615 PIK3R4Q99570 1358 aa19.29■□□□□ 0.68
SNRNP200-204ENST00000480615 NBPF1Q3BBV0 1214 aa19.28■□□□□ 0.68
SNRNP200-204ENST00000480615 PROSER2Q86WR7 435 aaPredicted RBP19.28■□□□□ 0.68
SNRNP200-204ENST00000480615 XRN1Q8IZH2 1706 aaKnown RBP19.28■□□□□ 0.68
SNRNP200-204ENST00000480615 CPS1P31327 1500 aa19.27■□□□□ 0.68
SNRNP200-204ENST00000480615 TRPM1Q7Z4N2 1603 aa19.26■□□□□ 0.67
SNRNP200-204ENST00000480615 YTHDC2Q9H6S0 1430 aaKnown RBP19.26■□□□□ 0.67
SNRNP200-204ENST00000480615 KIAA1210Q9ULL0 1709 aa19.25■□□□□ 0.67
SNRNP200-204ENST00000480615 LRRC7Q96NW7 1537 aa19.25■□□□□ 0.67
SNRNP200-204ENST00000480615 NKTRP30414 1462 aaKnown RBP19.25■□□□□ 0.67
SNRNP200-204ENST00000480615 ADGRB1O14514 1584 aa19.25■□□□□ 0.67
SNRNP200-204ENST00000480615 TRAK1Q9UPV9 953 aa19.24■□□□□ 0.67
SNRNP200-204ENST00000480615 XIRP1Q702N8 1843 aaKnown RBP19.23■□□□□ 0.67
SNRNP200-204ENST00000480615 C14orf37Q86TY3 774 aa19.23■□□□□ 0.67
SNRNP200-204ENST00000480615 CERKQ8TCT0 537 aa19.23■□□□□ 0.67
SNRNP200-204ENST00000480615 ROCK2O75116 1388 aaKnown RBP19.23■□□□□ 0.67
SNRNP200-204ENST00000480615 LRPPRCP42704 1394 aaKnown RBP19.23■□□□□ 0.67
SNRNP200-204ENST00000480615 TMEM94Q12767 1356 aa19.23■□□□□ 0.67
SNRNP200-204ENST00000480615 ROBO2Q9HCK4 1378 aa19.23■□□□□ 0.67
SNRNP200-204ENST00000480615 TIMELESSQ9UNS1 1208 aa19.22■□□□□ 0.67
SNRNP200-204ENST00000480615 SAFB2Q14151 953 aaKnown RBP eCLIP19.2■□□□□ 0.66
SNRNP200-204ENST00000480615 WAPLQ7Z5K2 1190 aa19.2■□□□□ 0.66
SNRNP200-204ENST00000480615 KNDC1Q76NI1 1749 aa19.2■□□□□ 0.66
SNRNP200-204ENST00000480615 ABCC11Q96J66 1382 aa19.19■□□□□ 0.66
SNRNP200-204ENST00000480615 PTCH1Q13635 1447 aa19.18■□□□□ 0.66
SNRNP200-204ENST00000480615 PLEKHH1Q9ULM0 1364 aa19.18■□□□□ 0.66
SNRNP200-204ENST00000480615 RALGAPBQ86X10 1494 aa19.17■□□□□ 0.66
SNRNP200-204ENST00000480615 PRAM1Q96QH2 718 aa19.17■□□□□ 0.66
SNRNP200-204ENST00000480615 TECPR2O15040 1411 aa19.17■□□□□ 0.66
SNRNP200-204ENST00000480615 ARHGEF28Q8N1W1 1705 aaKnown RBP19.16■□□□□ 0.66
SNRNP200-204ENST00000480615 CARD11Q9BXL7 1154 aa19.16■□□□□ 0.66
SNRNP200-204ENST00000480615 POGKQ9P215 609 aa19.16■□□□□ 0.66
SNRNP200-204ENST00000480615 NALCNQ8IZF0 1738 aa19.15■□□□□ 0.66
SNRNP200-204ENST00000480615 MSH6P52701 1360 aa19.13■□□□□ 0.65
SNRNP200-204ENST00000480615 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.12■□□□□ 0.65
SNRNP200-204ENST00000480615 DLC1Q96QB1 1528 aa19.12■□□□□ 0.65
SNRNP200-204ENST00000480615 FAM135BQ49AJ0 1406 aa19.11■□□□□ 0.65
SNRNP200-204ENST00000480615 HIRIP3Q9BW71 556 aaPredicted RBP19.11■□□□□ 0.65
SNRNP200-204ENST00000480615 MINK1Q8N4C8 1332 aaPredicted RBP19.1■□□□□ 0.65
SNRNP200-204ENST00000480615 GPRASP1Q5JY77 1395 aa19.1■□□□□ 0.65
SNRNP200-204ENST00000480615 UBAP1LF5GYI3 381 aa19.1■□□□□ 0.65
SNRNP200-204ENST00000480615 ADGRL3Q9HAR2 1447 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms