RNA–Protein interactions for RNA: ENST00000480484.5

COMMD4-203, Transcript of COMM domain containing 4, humanhuman

TSL 1 (best)

Gene COMMD4, Length 3,225 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-203ENST00000480484 EIF2AK4Q9P2K8 1649 aaKnown RBP13.47□□□□□ -0.25
COMMD4-203ENST00000480484 ADGRL2O95490 1459 aa13.47□□□□□ -0.25
COMMD4-203ENST00000480484 ANKRD30AQ9BXX3 1397 aa13.47□□□□□ -0.25
COMMD4-203ENST00000480484 ANKRD50Q9ULJ7 1429 aa13.47□□□□□ -0.25
COMMD4-203ENST00000480484 MAPK8IP2Q13387 824 aaPredicted RBP13.47□□□□□ -0.25
COMMD4-203ENST00000480484 TAF7LQ5H9L4 462 aa13.47□□□□□ -0.25
COMMD4-203ENST00000480484 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.47□□□□□ -0.25
COMMD4-203ENST00000480484 RGS22Q8NE09 1264 aa13.47□□□□□ -0.25
COMMD4-203ENST00000480484 PLXNC1O60486 1568 aa13.46□□□□□ -0.25
COMMD4-203ENST00000480484 C9orf84Q5VXU9 1444 aa13.46□□□□□ -0.26
COMMD4-203ENST00000480484 ABCC1P33527 1531 aa13.45□□□□□ -0.26
COMMD4-203ENST00000480484 ASXL2Q76L83 1435 aa13.45□□□□□ -0.26
COMMD4-203ENST00000480484 KIAA1107Q9UPP5 1409 aa13.45□□□□□ -0.26
COMMD4-203ENST00000480484 PLIN1O60240 522 aa13.44□□□□□ -0.26
COMMD4-203ENST00000480484 CHGAP10645 457 aaKnown RBP13.44□□□□□ -0.26
COMMD4-203ENST00000480484 ARHGEF40Q8TER5 1519 aa13.44□□□□□ -0.26
COMMD4-203ENST00000480484 NUP155O75694 1391 aa13.44□□□□□ -0.26
COMMD4-203ENST00000480484 SMG6Q86US8 1419 aaKnown RBP13.43□□□□□ -0.26
COMMD4-203ENST00000480484 EXOC6Q8TAG9 804 aa13.43□□□□□ -0.26
COMMD4-203ENST00000480484 SPATA31E1Q6ZUB1 1445 aa13.42□□□□□ -0.26
COMMD4-203ENST00000480484 BRPF3Q9ULD4 1205 aa13.42□□□□□ -0.26
COMMD4-203ENST00000480484 DEPDC5O75140 1603 aa13.42□□□□□ -0.26
COMMD4-203ENST00000480484 BCL11BQ9C0K0 894 aaPredicted RBP13.41□□□□□ -0.26
COMMD4-203ENST00000480484 MAGI2Q86UL8 1455 aa13.41□□□□□ -0.26
COMMD4-203ENST00000480484 SLC4A3P48751 1232 aa13.41□□□□□ -0.26
COMMD4-203ENST00000480484 LMOD2Q6P5Q4 547 aa13.41□□□□□ -0.26
COMMD4-203ENST00000480484 DHX29Q7Z478 1369 aaKnown RBP13.41□□□□□ -0.26
COMMD4-203ENST00000480484 TSPY4P0CV99 314 aa13.41□□□□□ -0.26
COMMD4-203ENST00000480484 TSPY10P0CW01 314 aa13.41□□□□□ -0.26
COMMD4-203ENST00000480484 CDCA7LQ96GN5 454 aa13.41□□□□□ -0.26
COMMD4-203ENST00000480484 MBD5Q9P267 1494 aa13.4□□□□□ -0.26
COMMD4-203ENST00000480484 KIF15Q9NS87 1388 aa13.4□□□□□ -0.26
COMMD4-203ENST00000480484 PDE4AP27815 886 aa13.4□□□□□ -0.26
COMMD4-203ENST00000480484 ZC3H13Q5T200 1668 aaKnown RBP13.39□□□□□ -0.27
COMMD4-203ENST00000480484 RNF17Q9BXT8 1623 aaKnown RBP13.39□□□□□ -0.27
COMMD4-203ENST00000480484 SAMD9LQ8IVG5 1584 aa13.39□□□□□ -0.27
COMMD4-203ENST00000480484 USP35Q9P2H5 1018 aa13.39□□□□□ -0.27
COMMD4-203ENST00000480484 ATXN8OSP0DMR3 200 aa13.38□□□□□ -0.27
COMMD4-203ENST00000480484 SHANK2Q9UPX8 1470 aa13.38□□□□□ -0.27
COMMD4-203ENST00000480484 PPM1GO15355 546 aaPredicted RBP13.37□□□□□ -0.27
COMMD4-203ENST00000480484 ADAMTSL3P82987 1691 aa13.37□□□□□ -0.27
COMMD4-203ENST00000480484 AGLP35573 1532 aa13.37□□□□□ -0.27
COMMD4-203ENST00000480484 RNF123Q5XPI4 1314 aa13.37□□□□□ -0.27
COMMD4-203ENST00000480484 USP47Q96K76 1375 aa13.37□□□□□ -0.27
COMMD4-203ENST00000480484 KDM5AP29375 1690 aaKnown RBP13.36□□□□□ -0.27
COMMD4-203ENST00000480484 TMC1Q8TDI8 760 aa13.36□□□□□ -0.27
COMMD4-203ENST00000480484 TCERG1O14776 1098 aaKnown RBP13.35□□□□□ -0.27
COMMD4-203ENST00000480484 AEBP1Q8IUX7 1158 aa13.35□□□□□ -0.27
COMMD4-203ENST00000480484 PNISRQ8TF01 805 aaKnown RBP13.35□□□□□ -0.27
COMMD4-203ENST00000480484 KIDINS220Q9ULH0 1771 aa13.35□□□□□ -0.27
COMMD4-203ENST00000480484 SYCP2Q9BX26 1530 aa13.35□□□□□ -0.27
COMMD4-203ENST00000480484 ZNF692Q9BU19 519 aaPredicted RBP13.35□□□□□ -0.27
COMMD4-203ENST00000480484 HECW2Q9P2P5 1572 aa13.35□□□□□ -0.27
COMMD4-203ENST00000480484 SLC24A3Q9HC58 644 aa13.34□□□□□ -0.27
COMMD4-203ENST00000480484 ATF5Q9Y2D1 282 aaPredicted RBP13.34□□□□□ -0.27
COMMD4-203ENST00000480484 CCDC141Q6ZP82 1450 aa13.33□□□□□ -0.27
COMMD4-203ENST00000480484 SIGLEC1Q9BZZ2 1709 aa13.33□□□□□ -0.27
COMMD4-203ENST00000480484 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.33□□□□□ -0.28
COMMD4-203ENST00000480484 BACH2Q9BYV9 841 aa13.33□□□□□ -0.28
COMMD4-203ENST00000480484 WASHC2CQ9Y4E1 1318 aa13.33□□□□□ -0.28
COMMD4-203ENST00000480484 PLCH2O75038 1416 aa13.33□□□□□ -0.28
COMMD4-203ENST00000480484 ARHGAP5Q13017 1502 aa13.33□□□□□ -0.28
COMMD4-203ENST00000480484 ST20-MTHFSA0A0A6YYL1 179 aa13.33□□□□□ -0.28
COMMD4-203ENST00000480484 GSE1Q14687 1217 aa13.33□□□□□ -0.28
COMMD4-203ENST00000480484 PLEKHH2Q8IVE3 1493 aa13.32□□□□□ -0.28
COMMD4-203ENST00000480484 RRP1P56182 461 aaKnown RBP13.32□□□□□ -0.28
COMMD4-203ENST00000480484 DCAF11Q8TEB1 546 aa13.32□□□□□ -0.28
COMMD4-203ENST00000480484 POLR1AO95602 1720 aaPredicted RBP13.31□□□□□ -0.28
COMMD4-203ENST00000480484 C20orf194Q5TEA3 1177 aa13.31□□□□□ -0.28
COMMD4-203ENST00000480484 KDM5DQ9BY66 1539 aa13.31□□□□□ -0.28
COMMD4-203ENST00000480484 CARD11Q9BXL7 1154 aa13.3□□□□□ -0.28
COMMD4-203ENST00000480484 MLH3Q9UHC1 1453 aa13.29□□□□□ -0.28
COMMD4-203ENST00000480484 RGL3Q3MIN7 710 aa13.29□□□□□ -0.28
COMMD4-203ENST00000480484 NFKBIBQ15653 356 aa13.28□□□□□ -0.28
COMMD4-203ENST00000480484 CC2D1BQ5T0F9 858 aaKnown RBP13.28□□□□□ -0.28
COMMD4-203ENST00000480484 FRAT1Q92837 279 aaPredicted RBP13.28□□□□□ -0.28
COMMD4-203ENST00000480484 RCAN3Q9UKA8 241 aa13.28□□□□□ -0.28
COMMD4-203ENST00000480484 ARHGEF12Q9NZN5 1544 aa13.28□□□□□ -0.28
COMMD4-203ENST00000480484 ZNF142P52746 1687 aaPredicted RBP13.28□□□□□ -0.28
COMMD4-203ENST00000480484 ABCA6Q8N139 1617 aa13.28□□□□□ -0.28
COMMD4-203ENST00000480484 DIP2CQ9Y2E4 1556 aa13.28□□□□□ -0.28
COMMD4-203ENST00000480484 RALGAPBQ86X10 1494 aa13.27□□□□□ -0.28
COMMD4-203ENST00000480484 UHRF1BP1Q6BDS2 1440 aa13.27□□□□□ -0.28
COMMD4-203ENST00000480484 CCDC82Q8N4S0 544 aa13.27□□□□□ -0.28
COMMD4-203ENST00000480484 VWDEQ8N2E2 1590 aa13.27□□□□□ -0.29
COMMD4-203ENST00000480484 ZFYVE16Q7Z3T8 1539 aa13.27□□□□□ -0.29
COMMD4-203ENST00000480484 DDRGK1Q96HY6 314 aa13.26□□□□□ -0.29
COMMD4-203ENST00000480484 FAM177A1Q8N128 213 aaPredicted RBP13.26□□□□□ -0.29
COMMD4-203ENST00000480484 RTEL1-TNFRSF6BF6WH68 1400 aa13.25□□□□□ -0.29
COMMD4-203ENST00000480484 TSPOAP1O95153 1857 aa13.25□□□□□ -0.29
COMMD4-203ENST00000480484 MS4A1P11836 297 aa13.25□□□□□ -0.29
COMMD4-203ENST00000480484 NBPF1Q3BBV0 1214 aa13.25□□□□□ -0.29
COMMD4-203ENST00000480484 CWC22Q9HCG8 908 aaKnown RBP13.25□□□□□ -0.29
COMMD4-203ENST00000480484 PLA2R1Q13018 1463 aa13.25□□□□□ -0.29
COMMD4-203ENST00000480484 UNC13BO14795 1591 aa13.24□□□□□ -0.29
COMMD4-203ENST00000480484 POGZQ7Z3K3 1410 aa13.23□□□□□ -0.29
COMMD4-203ENST00000480484 ROCK2O75116 1388 aaKnown RBP13.23□□□□□ -0.29
COMMD4-203ENST00000480484 CRBNQ96SW2 442 aa13.22□□□□□ -0.29
COMMD4-203ENST00000480484 CCDC144AA2RUR9 1427 aa13.22□□□□□ -0.29
COMMD4-203ENST00000480484 RSPH4AQ5TD94 716 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms