RNA–Protein interactions for RNA: ENST00000479904.1

BARD1-208, Transcript of BRCA1 associated RING domain 1, humanhuman

TSL 4

Gene BARD1, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BARD1-208ENST00000479904 ZFYVE9O95405 1425 aa27.92■■■□□ 2.06
BARD1-208ENST00000479904 MED1Q15648 1581 aaPredicted RBP27.91■■■□□ 2.06
BARD1-208ENST00000479904 BCANQ96GW7 911 aa27.91■■■□□ 2.06
BARD1-208ENST00000479904 NUP155O75694 1391 aa27.9■■■□□ 2.06
BARD1-208ENST00000479904 KCNA6P17658 529 aa27.9■■■□□ 2.06
BARD1-208ENST00000479904 RIMS2Q9UQ26 1411 aa27.89■■■□□ 2.06
BARD1-208ENST00000479904 TMEM94Q12767 1356 aa27.88■■■□□ 2.05
BARD1-208ENST00000479904 SOCS7O14512 581 aa27.88■■■□□ 2.05
BARD1-208ENST00000479904 CHGAP10645 457 aaKnown RBP27.88■■■□□ 2.05
BARD1-208ENST00000479904 NWD1Q149M9 1564 aa27.86■■■□□ 2.05
BARD1-208ENST00000479904 PPP1R15AO75807 674 aaPredicted RBP27.85■■■□□ 2.05
BARD1-208ENST00000479904 RBM33Q96EV2 1170 aaKnown RBP27.85■■■□□ 2.05
BARD1-208ENST00000479904 PLEKHG1Q9ULL1 1385 aa27.85■■■□□ 2.05
BARD1-208ENST00000479904 PROSER2Q86WR7 435 aaPredicted RBP27.84■■■□□ 2.05
BARD1-208ENST00000479904 NKTRP30414 1462 aaKnown RBP27.83■■■□□ 2.04
BARD1-208ENST00000479904 HDGFP51858 240 aaKnown RBP27.82■■■□□ 2.04
BARD1-208ENST00000479904 CHD2O14647 1828 aaKnown RBP27.8■■■□□ 2.04
BARD1-208ENST00000479904 RRBP1Q9P2E9 1410 aaKnown RBP27.79■■■□□ 2.04
BARD1-208ENST00000479904 NUTM2DQ5VT03 806 aaPredicted RBP27.79■■■□□ 2.04
BARD1-208ENST00000479904 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.77■■■□□ 2.04
BARD1-208ENST00000479904 SPHKAPQ2M3C7 1700 aa27.77■■■□□ 2.04
BARD1-208ENST00000479904 FAM135BQ49AJ0 1406 aa27.74■■■□□ 2.03
BARD1-208ENST00000479904 TBX22Q9Y458 520 aa27.73■■■□□ 2.03
BARD1-208ENST00000479904 ADAMTS13Q76LX8 1427 aa27.73■■■□□ 2.03
BARD1-208ENST00000479904 ROBO1Q9Y6N7 1651 aa27.72■■■□□ 2.03
BARD1-208ENST00000479904 NAIPQ13075 1403 aa27.7■■■□□ 2.03
BARD1-208ENST00000479904 MSH6P52701 1360 aa27.7■■■□□ 2.02
BARD1-208ENST00000479904 DIP2AQ14689 1571 aa27.69■■■□□ 2.02
BARD1-208ENST00000479904 PHF23Q9BUL5 403 aaPredicted RBP27.69■■■□□ 2.02
BARD1-208ENST00000479904 CLTCL1P53675 1640 aa27.63■■■□□ 2.01
BARD1-208ENST00000479904 TRPM2O94759 1503 aa27.62■■■□□ 2.01
BARD1-208ENST00000479904 PIK3R4Q99570 1358 aa27.61■■■□□ 2.01
BARD1-208ENST00000479904 NRXN3Q9Y4C0 1643 aa27.61■■■□□ 2.01
BARD1-208ENST00000479904 SLAIN2Q9P270 581 aa27.61■■■□□ 2.01
BARD1-208ENST00000479904 ZNF326Q5BKZ1 582 aaKnown RBP27.6■■■□□ 2.01
BARD1-208ENST00000479904 C14orf37Q86TY3 774 aa27.6■■■□□ 2.01
BARD1-208ENST00000479904 PTPRUQ92729 1446 aa27.58■■■□□ 2.01
BARD1-208ENST00000479904 HFM1A2PYH4 1435 aa27.58■■■□□ 2
BARD1-208ENST00000479904 NCOA3Q9Y6Q9 1424 aa27.58■■■□□ 2
BARD1-208ENST00000479904 SETBP1Q9Y6X0 1596 aa27.57■■■□□ 2
BARD1-208ENST00000479904 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.56■■■□□ 2
BARD1-208ENST00000479904 KIF1BO60333 1816 aa27.56■■■□□ 2
BARD1-208ENST00000479904 TRIM52Q96A61 297 aa27.56■■■□□ 2
BARD1-208ENST00000479904 AMOTL2Q9Y2J4 779 aa27.56■■■□□ 2
BARD1-208ENST00000479904 PHLPP1O60346 1717 aa27.55■■■□□ 2
BARD1-208ENST00000479904 NEXMIFQ5QGS0 1516 aa27.54■■■□□ 2
BARD1-208ENST00000479904 XRN1Q8IZH2 1706 aaKnown RBP27.53■■■□□ 2
BARD1-208ENST00000479904 C19orf44Q9H6X5 657 aa27.5■■□□□ 1.99
BARD1-208ENST00000479904 RGS17Q9UGC6 210 aaPredicted RBP27.49■■□□□ 1.99
BARD1-208ENST00000479904 METP08581 1390 aa27.48■■□□□ 1.99
BARD1-208ENST00000479904 ATF3P18847 181 aa27.48■■□□□ 1.99
BARD1-208ENST00000479904 CADPS2Q86UW7 1296 aa27.48■■□□□ 1.99
BARD1-208ENST00000479904 SLC4A1APQ9BWU0 796 aaKnown RBP27.47■■□□□ 1.99
BARD1-208ENST00000479904 COL16A1Q07092 1604 aaPredicted RBP27.46■■□□□ 1.99
BARD1-208ENST00000479904 JCADQ9P266 1359 aa27.42■■□□□ 1.98
BARD1-208ENST00000479904 AHDC1Q5TGY3 1603 aaPredicted RBP27.39■■□□□ 1.98
BARD1-208ENST00000479904 DCCP43146 1447 aa27.39■■□□□ 1.97
BARD1-208ENST00000479904 FOXD1Q16676 465 aa27.38■■□□□ 1.97
BARD1-208ENST00000479904 SETD1AO15047 1707 aaKnown RBP27.37■■□□□ 1.97
BARD1-208ENST00000479904 PPLO60437 1756 aa27.36■■□□□ 1.97
BARD1-208ENST00000479904 BRINP3Q76B58 766 aa27.36■■□□□ 1.97
BARD1-208ENST00000479904 NALCNQ8IZF0 1738 aa27.36■■□□□ 1.97
BARD1-208ENST00000479904 VGFO15240 615 aaPredicted RBP27.35■■□□□ 1.97
BARD1-208ENST00000479904 POTEAQ6S8J7 498 aa27.34■■□□□ 1.97
BARD1-208ENST00000479904 MST1RQ04912 1400 aa27.33■■□□□ 1.97
BARD1-208ENST00000479904 ADGRL3Q9HAR2 1447 aa27.33■■□□□ 1.97
BARD1-208ENST00000479904 RPGRIP1LQ68CZ1 1315 aa27.32■■□□□ 1.96
BARD1-208ENST00000479904 ASXL1Q8IXJ9 1541 aa27.31■■□□□ 1.96
BARD1-208ENST00000479904 SHPRHQ149N8 1683 aa27.3■■□□□ 1.96
BARD1-208ENST00000479904 LRP6O75581 1613 aa27.3■■□□□ 1.96
BARD1-208ENST00000479904 SPATA31A6Q5VVP1 1343 aa27.27■■□□□ 1.96
BARD1-208ENST00000479904 MPHOSPH9Q99550 1183 aa27.27■■□□□ 1.96
BARD1-208ENST00000479904 NHSL1Q5SYE7 1610 aa27.27■■□□□ 1.96
BARD1-208ENST00000479904 CCDC144AA2RUR9 1427 aa27.26■■□□□ 1.95
BARD1-208ENST00000479904 PTCH1Q13635 1447 aa27.26■■□□□ 1.95
BARD1-208ENST00000479904 ROBO2Q9HCK4 1378 aa27.26■■□□□ 1.95
BARD1-208ENST00000479904 RGL3Q3MIN7 710 aa27.22■■□□□ 1.95
BARD1-208ENST00000479904 MEX3CQ5U5Q3 659 aaKnown RBP27.22■■□□□ 1.95
BARD1-208ENST00000479904 SPATA31E1Q6ZUB1 1445 aa27.21■■□□□ 1.95
BARD1-208ENST00000479904 PRAG1Q86YV5 1406 aa27.21■■□□□ 1.95
BARD1-208ENST00000479904 IFT172Q9UG01 1749 aa27.21■■□□□ 1.95
BARD1-208ENST00000479904 DDX17Q92841 729 aaKnown RBP27.2■■□□□ 1.94
BARD1-208ENST00000479904 ADGRF5Q8IZF2 1346 aa27.19■■□□□ 1.94
BARD1-208ENST00000479904 SETD5Q9C0A6 1442 aa27.19■■□□□ 1.94
BARD1-208ENST00000479904 NUTM2BA6NNL0 878 aaPredicted RBP27.18■■□□□ 1.94
BARD1-208ENST00000479904 NUTM2EB1AL46 878 aaPredicted RBP27.18■■□□□ 1.94
BARD1-208ENST00000479904 NUTM2AQ8IVF1 878 aaPredicted RBP27.18■■□□□ 1.94
BARD1-208ENST00000479904 C1orf167Q5SNV9 1468 aa27.18■■□□□ 1.94
BARD1-208ENST00000479904 ANKRD30BQ9BXX2 1392 aa27.14■■□□□ 1.94
BARD1-208ENST00000479904 LRRC59Q96AG4 307 aaKnown RBP27.13■■□□□ 1.93
BARD1-208ENST00000479904 ORAI2Q96SN7 254 aa27.11■■□□□ 1.93
BARD1-208ENST00000479904 LAMC1P11047 1609 aa27.1■■□□□ 1.93
BARD1-208ENST00000479904 ZNF772Q68DY9 489 aaPredicted RBP27.1■■□□□ 1.93
BARD1-208ENST00000479904 STK26Q9P289 416 aa27.1■■□□□ 1.93
BARD1-208ENST00000479904 PNPLA6Q8IY17 1366 aa27.09■■□□□ 1.93
BARD1-208ENST00000479904 PIK3C2GO75747 1445 aa27.07■■□□□ 1.92
BARD1-208ENST00000479904 CDC42BPGQ6DT37 1551 aa27.07■■□□□ 1.92
BARD1-208ENST00000479904 ACIN1Q9UKV3 1341 aaKnown RBP27.07■■□□□ 1.92
BARD1-208ENST00000479904 RAB3GAP2Q9H2M9 1393 aa27.07■■□□□ 1.92
BARD1-208ENST00000479904 TMEM132EQ6IEE7 984 aa27.06■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms