RNA–Protein interactions for RNA: ENST00000479897.5

TRAPPC12-218, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 454 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-218ENST00000479897 POLR1AO95602 1720 aaPredicted RBP18.14■□□□□ 0.49
TRAPPC12-218ENST00000479897 STAG3Q9UJ98 1225 aa18.13■□□□□ 0.49
TRAPPC12-218ENST00000479897 RIMS2Q9UQ26 1411 aa18.13■□□□□ 0.49
TRAPPC12-218ENST00000479897 CHGAP10645 457 aaKnown RBP18.12■□□□□ 0.49
TRAPPC12-218ENST00000479897 THEMISQ8N1K5 641 aaPredicted RBP18.12■□□□□ 0.49
TRAPPC12-218ENST00000479897 L3MBTL2Q969R5 705 aa18.11■□□□□ 0.49
TRAPPC12-218ENST00000479897 KIAA1210Q9ULL0 1709 aa18.09■□□□□ 0.49
TRAPPC12-218ENST00000479897 LAMC1P11047 1609 aa18.09■□□□□ 0.49
TRAPPC12-218ENST00000479897 RGL3Q3MIN7 710 aa18.09■□□□□ 0.49
TRAPPC12-218ENST00000479897 SETBP1Q9Y6X0 1596 aa18.08■□□□□ 0.49
TRAPPC12-218ENST00000479897 SCAF11Q99590 1463 aaKnown RBP18.08■□□□□ 0.49
TRAPPC12-218ENST00000479897 PIK3C2GO75747 1445 aa18.08■□□□□ 0.49
TRAPPC12-218ENST00000479897 PRAG1Q86YV5 1406 aa18.08■□□□□ 0.49
TRAPPC12-218ENST00000479897 ZEB1P37275 1124 aaPredicted RBP18.08■□□□□ 0.48
TRAPPC12-218ENST00000479897 ZNF326Q5BKZ1 582 aaKnown RBP18.08■□□□□ 0.48
TRAPPC12-218ENST00000479897 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.07■□□□□ 0.48
TRAPPC12-218ENST00000479897 NRXN3Q9Y4C0 1643 aa18.07■□□□□ 0.48
TRAPPC12-218ENST00000479897 TRPM1Q7Z4N2 1603 aa18.06■□□□□ 0.48
TRAPPC12-218ENST00000479897 MED14O60244 1454 aa18.06■□□□□ 0.48
TRAPPC12-218ENST00000479897 SETD1AO15047 1707 aaKnown RBP18.06■□□□□ 0.48
TRAPPC12-218ENST00000479897 IQGAP1P46940 1657 aa18.06■□□□□ 0.48
TRAPPC12-218ENST00000479897 VGFO15240 615 aaPredicted RBP18.05■□□□□ 0.48
TRAPPC12-218ENST00000479897 HDGFP51858 240 aaKnown RBP18.05■□□□□ 0.48
TRAPPC12-218ENST00000479897 DCAF11Q8TEB1 546 aa18.05■□□□□ 0.48
TRAPPC12-218ENST00000479897 PLEKHG1Q9ULL1 1385 aa18.04■□□□□ 0.48
TRAPPC12-218ENST00000479897 DIP2AQ14689 1571 aa18.04■□□□□ 0.48
TRAPPC12-218ENST00000479897 PPP1R15AO75807 674 aaPredicted RBP18.03■□□□□ 0.48
TRAPPC12-218ENST00000479897 RALGAPBQ86X10 1494 aa18.02■□□□□ 0.48
TRAPPC12-218ENST00000479897 STRCQ7RTU9 1775 aa18.02■□□□□ 0.48
TRAPPC12-218ENST00000479897 ADGRF5Q8IZF2 1346 aa18.01■□□□□ 0.47
TRAPPC12-218ENST00000479897 EID1Q9Y6B2 187 aa18.01■□□□□ 0.47
TRAPPC12-218ENST00000479897 LTKP29376 864 aa18■□□□□ 0.47
TRAPPC12-218ENST00000479897 ALKQ9UM73 1620 aa17.99■□□□□ 0.47
TRAPPC12-218ENST00000479897 TXNDC2Q86VQ3 553 aa17.99■□□□□ 0.47
TRAPPC12-218ENST00000479897 ANKLE2Q86XL3 938 aa17.99■□□□□ 0.47
TRAPPC12-218ENST00000479897 KDM2AQ9Y2K7 1162 aa17.98■□□□□ 0.47
TRAPPC12-218ENST00000479897 ADAMTS13Q76LX8 1427 aa17.98■□□□□ 0.47
TRAPPC12-218ENST00000479897 ADGRB1O14514 1584 aa17.97■□□□□ 0.47
TRAPPC12-218ENST00000479897 ASXL1Q8IXJ9 1541 aa17.97■□□□□ 0.47
TRAPPC12-218ENST00000479897 NPHP4O75161 1426 aaPredicted RBP17.97■□□□□ 0.47
TRAPPC12-218ENST00000479897 GPRASP1Q5JY77 1395 aa17.96■□□□□ 0.47
TRAPPC12-218ENST00000479897 NBPF8Q3BBV2 869 aa17.96■□□□□ 0.47
TRAPPC12-218ENST00000479897 NUTM2DQ5VT03 806 aaPredicted RBP17.95■□□□□ 0.46
TRAPPC12-218ENST00000479897 HSPA2P54652 639 aa17.94■□□□□ 0.46
TRAPPC12-218ENST00000479897 KNDC1Q76NI1 1749 aa17.93■□□□□ 0.46
TRAPPC12-218ENST00000479897 C14orf93Q9H972 538 aaKnown RBP17.93■□□□□ 0.46
TRAPPC12-218ENST00000479897 PIK3R4Q99570 1358 aa17.91■□□□□ 0.46
TRAPPC12-218ENST00000479897 XRN1Q8IZH2 1706 aaKnown RBP17.9■□□□□ 0.46
TRAPPC12-218ENST00000479897 CHD2O14647 1828 aaKnown RBP17.9■□□□□ 0.46
TRAPPC12-218ENST00000479897 NWD1Q149M9 1564 aa17.9■□□□□ 0.46
TRAPPC12-218ENST00000479897 CFAP70Q5T0N1 1121 aa17.89■□□□□ 0.45
TRAPPC12-218ENST00000479897 AEBP2Q6ZN18 517 aaPredicted RBP17.89■□□□□ 0.45
TRAPPC12-218ENST00000479897 TBX22Q9Y458 520 aa17.89■□□□□ 0.45
TRAPPC12-218ENST00000479897 NCKAP5LQ9HCH0 1330 aa17.89■□□□□ 0.45
TRAPPC12-218ENST00000479897 ROCK2O75116 1388 aaKnown RBP17.89■□□□□ 0.45
TRAPPC12-218ENST00000479897 CPS1P31327 1500 aa17.88■□□□□ 0.45
TRAPPC12-218ENST00000479897 ARHGEF28Q8N1W1 1705 aaKnown RBP17.87■□□□□ 0.45
TRAPPC12-218ENST00000479897 TECPR2O15040 1411 aa17.87■□□□□ 0.45
TRAPPC12-218ENST00000479897 DLC1Q96QB1 1528 aa17.87■□□□□ 0.45
TRAPPC12-218ENST00000479897 METP08581 1390 aa17.85■□□□□ 0.45
TRAPPC12-218ENST00000479897 YTHDC2Q9H6S0 1430 aaKnown RBP17.85■□□□□ 0.45
TRAPPC12-218ENST00000479897 LRPPRCP42704 1394 aaKnown RBP17.84■□□□□ 0.45
TRAPPC12-218ENST00000479897 NBPF1Q3BBV0 1214 aa17.84■□□□□ 0.45
TRAPPC12-218ENST00000479897 PTCH1Q13635 1447 aa17.83■□□□□ 0.45
TRAPPC12-218ENST00000479897 PTPRUQ92729 1446 aa17.82■□□□□ 0.44
TRAPPC12-218ENST00000479897 ABCC11Q96J66 1382 aa17.82■□□□□ 0.44
TRAPPC12-218ENST00000479897 BCANQ96GW7 911 aa17.82■□□□□ 0.44
TRAPPC12-218ENST00000479897 SLC26A8Q96RN1 970 aa17.82■□□□□ 0.44
TRAPPC12-218ENST00000479897 DMRT2Q9Y5R5 561 aa17.82■□□□□ 0.44
TRAPPC12-218ENST00000479897 NKTRP30414 1462 aaKnown RBP17.82■□□□□ 0.44
TRAPPC12-218ENST00000479897 CARD11Q9BXL7 1154 aa17.81■□□□□ 0.44
TRAPPC12-218ENST00000479897 STRCP1A6NGW2 1772 aa17.8■□□□□ 0.44
TRAPPC12-218ENST00000479897 EIF3AQ14152 1382 aaKnown RBP17.79■□□□□ 0.44
TRAPPC12-218ENST00000479897 FAM135BQ49AJ0 1406 aa17.79■□□□□ 0.44
TRAPPC12-218ENST00000479897 USP47Q96K76 1375 aa17.79■□□□□ 0.44
TRAPPC12-218ENST00000479897 TMEM132EQ6IEE7 984 aa17.78■□□□□ 0.44
TRAPPC12-218ENST00000479897 QRICH2Q9H0J4 1663 aa17.77■□□□□ 0.44
TRAPPC12-218ENST00000479897 SENP3Q9H4L4 574 aaPredicted RBP17.77■□□□□ 0.44
TRAPPC12-218ENST00000479897 SIRT1Q96EB6 747 aa17.75■□□□□ 0.43
TRAPPC12-218ENST00000479897 SBNO2Q9Y2G9 1366 aa17.75■□□□□ 0.43
TRAPPC12-218ENST00000479897 KCNA6P17658 529 aa17.74■□□□□ 0.43
TRAPPC12-218ENST00000479897 ADGRB2O60241 1585 aa17.74■□□□□ 0.43
TRAPPC12-218ENST00000479897 AMOTL2Q9Y2J4 779 aa17.73■□□□□ 0.43
TRAPPC12-218ENST00000479897 ROBO2Q9HCK4 1378 aa17.73■□□□□ 0.43
TRAPPC12-218ENST00000479897 EIF4G2P78344 907 aaKnown RBP eCLIP17.72■□□□□ 0.432e-9■■■□□ 17.1
TRAPPC12-218ENST00000479897 TRAK1Q9UPV9 953 aa17.7■□□□□ 0.42
TRAPPC12-218ENST00000479897 CENPJQ9HC77 1338 aaPredicted RBP17.7■□□□□ 0.42
TRAPPC12-218ENST00000479897 NALCNQ8IZF0 1738 aa17.69■□□□□ 0.42
TRAPPC12-218ENST00000479897 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.69■□□□□ 0.42
TRAPPC12-218ENST00000479897 LTBP4Q8N2S1 1624 aa17.69■□□□□ 0.42
TRAPPC12-218ENST00000479897 STK26Q9P289 416 aa17.69■□□□□ 0.42
TRAPPC12-218ENST00000479897 XIRP1Q702N8 1843 aaKnown RBP17.69■□□□□ 0.42
TRAPPC12-218ENST00000479897 NCOA3Q9Y6Q9 1424 aa17.69■□□□□ 0.42
TRAPPC12-218ENST00000479897 HSPA5P11021 654 aaKnown RBP17.68■□□□□ 0.42
TRAPPC12-218ENST00000479897 CDC42BPGQ6DT37 1551 aa17.67■□□□□ 0.42
TRAPPC12-218ENST00000479897 ZNF335Q9H4Z2 1342 aaPredicted RBP17.67■□□□□ 0.42
TRAPPC12-218ENST00000479897 PLEKHH1Q9ULM0 1364 aa17.66■□□□□ 0.42
TRAPPC12-218ENST00000479897 ST20-MTHFSA0A0A6YYL1 179 aa17.66■□□□□ 0.42
TRAPPC12-218ENST00000479897 PRAM1Q96QH2 718 aa17.66■□□□□ 0.42
TRAPPC12-218ENST00000479897 LRRC7Q96NW7 1537 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms