RNA–Protein interactions for RNA: ENST00000479320.5

HLA-A-206, Transcript of major histocompatibility complex, class I, A, humanhuman

Gene HLA-A, Length 1,334 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-206ENST00000479320 PIP4K2BP78356 416 aa26.84■■□□□ 1.89
HLA-A-206ENST00000479320 BCANQ96GW7 911 aa26.84■■□□□ 1.89
HLA-A-206ENST00000479320 SPHKAPQ2M3C7 1700 aa26.84■■□□□ 1.89
HLA-A-206ENST00000479320 SENP3Q9H4L4 574 aaPredicted RBP26.83■■□□□ 1.89
HLA-A-206ENST00000479320 SCAF1Q9H7N4 1312 aaKnown RBP26.82■■□□□ 1.88
HLA-A-206ENST00000479320 PPP1R15AO75807 674 aaPredicted RBP26.82■■□□□ 1.88
HLA-A-206ENST00000479320 PLEKHG1Q9ULL1 1385 aa26.81■■□□□ 1.88
HLA-A-206ENST00000479320 KCNA6P17658 529 aa26.81■■□□□ 1.88
HLA-A-206ENST00000479320 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.81■■□□□ 1.88
HLA-A-206ENST00000479320 ALKQ9UM73 1620 aa26.8■■□□□ 1.88
HLA-A-206ENST00000479320 TRIM52Q96A61 297 aa26.8■■□□□ 1.88
HLA-A-206ENST00000479320 XIRP1Q702N8 1843 aaKnown RBP26.8■■□□□ 1.88
HLA-A-206ENST00000479320 NUTM2DQ5VT03 806 aaPredicted RBP26.78■■□□□ 1.88
HLA-A-206ENST00000479320 HSPA1LP34931 641 aa26.72■■□□□ 1.87
HLA-A-206ENST00000479320 PROSER2Q86WR7 435 aaPredicted RBP26.72■■□□□ 1.87
HLA-A-206ENST00000479320 TBX22Q9Y458 520 aa26.72■■□□□ 1.87
HLA-A-206ENST00000479320 NWD1Q149M9 1564 aa26.72■■□□□ 1.87
HLA-A-206ENST00000479320 CHD2O14647 1828 aaKnown RBP26.72■■□□□ 1.87
HLA-A-206ENST00000479320 TMEM94Q12767 1356 aa26.71■■□□□ 1.87
HLA-A-206ENST00000479320 CLTCL1P53675 1640 aa26.7■■□□□ 1.87
HLA-A-206ENST00000479320 SLC4A1APQ9BWU0 796 aaKnown RBP26.7■■□□□ 1.87
HLA-A-206ENST00000479320 TRPM2O94759 1503 aa26.7■■□□□ 1.87
HLA-A-206ENST00000479320 ADAMTS13Q76LX8 1427 aa26.69■■□□□ 1.86
HLA-A-206ENST00000479320 RBM33Q96EV2 1170 aaKnown RBP26.68■■□□□ 1.86
HLA-A-206ENST00000479320 NKTRP30414 1462 aaKnown RBP26.68■■□□□ 1.86
HLA-A-206ENST00000479320 ZNF326Q5BKZ1 582 aaKnown RBP26.67■■□□□ 1.86
HLA-A-206ENST00000479320 DISP3Q9P2K9 1392 aa26.66■■□□□ 1.86
HLA-A-206ENST00000479320 KIF1BO60333 1816 aa26.66■■□□□ 1.86
HLA-A-206ENST00000479320 DIP2AQ14689 1571 aa26.64■■□□□ 1.86
HLA-A-206ENST00000479320 PIK3R4Q99570 1358 aa26.6■■□□□ 1.85
HLA-A-206ENST00000479320 FOXD1Q16676 465 aa26.59■■□□□ 1.85
HLA-A-206ENST00000479320 NRXN3Q9Y4C0 1643 aa26.58■■□□□ 1.85
HLA-A-206ENST00000479320 NEXMIFQ5QGS0 1516 aa26.58■■□□□ 1.85
HLA-A-206ENST00000479320 SETBP1Q9Y6X0 1596 aa26.57■■□□□ 1.84
HLA-A-206ENST00000479320 MPHOSPH9Q99550 1183 aa26.56■■□□□ 1.84
HLA-A-206ENST00000479320 AMOTL2Q9Y2J4 779 aa26.55■■□□□ 1.84
HLA-A-206ENST00000479320 MSH6P52701 1360 aa26.55■■□□□ 1.84
HLA-A-206ENST00000479320 PTPRUQ92729 1446 aa26.54■■□□□ 1.84
HLA-A-206ENST00000479320 FAM135BQ49AJ0 1406 aa26.54■■□□□ 1.84
HLA-A-206ENST00000479320 SETD5Q9C0A6 1442 aa26.54■■□□□ 1.84
HLA-A-206ENST00000479320 NCOA3Q9Y6Q9 1424 aa26.52■■□□□ 1.84
HLA-A-206ENST00000479320 ACIN1Q9UKV3 1341 aaKnown RBP26.5■■□□□ 1.83
HLA-A-206ENST00000479320 METP08581 1390 aa26.49■■□□□ 1.83
HLA-A-206ENST00000479320 RPGRIP1LQ68CZ1 1315 aa26.49■■□□□ 1.83
HLA-A-206ENST00000479320 VGFO15240 615 aaPredicted RBP26.49■■□□□ 1.83
HLA-A-206ENST00000479320 ILDR2Q71H61 639 aa26.48■■□□□ 1.83
HLA-A-206ENST00000479320 SLAIN2Q9P270 581 aa26.48■■□□□ 1.83
HLA-A-206ENST00000479320 C14orf37Q86TY3 774 aa26.47■■□□□ 1.83
HLA-A-206ENST00000479320 ROBO1Q9Y6N7 1651 aa26.47■■□□□ 1.83
HLA-A-206ENST00000479320 XRN1Q8IZH2 1706 aaKnown RBP26.46■■□□□ 1.83
HLA-A-206ENST00000479320 CCDC144AA2RUR9 1427 aa26.45■■□□□ 1.82
HLA-A-206ENST00000479320 PPLO60437 1756 aa26.45■■□□□ 1.82
HLA-A-206ENST00000479320 C19orf44Q9H6X5 657 aa26.44■■□□□ 1.82
HLA-A-206ENST00000479320 MED1Q15648 1581 aaPredicted RBP26.44■■□□□ 1.82
HLA-A-206ENST00000479320 RAB3GAP2Q9H2M9 1393 aa26.44■■□□□ 1.82
HLA-A-206ENST00000479320 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.44■■□□□ 1.82
HLA-A-206ENST00000479320 SOCS7O14512 581 aa26.43■■□□□ 1.82
HLA-A-206ENST00000479320 RGL3Q3MIN7 710 aa26.39■■□□□ 1.82
HLA-A-206ENST00000479320 SPATA31E1Q6ZUB1 1445 aa26.39■■□□□ 1.81
HLA-A-206ENST00000479320 SETD1AO15047 1707 aaKnown RBP26.39■■□□□ 1.81
HLA-A-206ENST00000479320 ATF3P18847 181 aa26.39■■□□□ 1.81
HLA-A-206ENST00000479320 CADPS2Q86UW7 1296 aa26.39■■□□□ 1.81
HLA-A-206ENST00000479320 ADGRF5Q8IZF2 1346 aa26.33■■□□□ 1.81
HLA-A-206ENST00000479320 IFT172Q9UG01 1749 aa26.32■■□□□ 1.8
HLA-A-206ENST00000479320 PHLPP1O60346 1717 aa26.32■■□□□ 1.8
HLA-A-206ENST00000479320 DCCP43146 1447 aa26.31■■□□□ 1.8
HLA-A-206ENST00000479320 ANKRD30BQ9BXX2 1392 aa26.3■■□□□ 1.8
HLA-A-206ENST00000479320 HRCP23327 699 aa26.29■■□□□ 1.8
HLA-A-206ENST00000479320 ADGRL3Q9HAR2 1447 aa26.28■■□□□ 1.8
HLA-A-206ENST00000479320 PHF23Q9BUL5 403 aaPredicted RBP26.27■■□□□ 1.8
HLA-A-206ENST00000479320 ROBO2Q9HCK4 1378 aa26.27■■□□□ 1.8
HLA-A-206ENST00000479320 NALCNQ8IZF0 1738 aa26.27■■□□□ 1.8
HLA-A-206ENST00000479320 PTCH1Q13635 1447 aa26.26■■□□□ 1.79
HLA-A-206ENST00000479320 MST1RQ04912 1400 aa26.24■■□□□ 1.79
HLA-A-206ENST00000479320 PRAG1Q86YV5 1406 aa26.24■■□□□ 1.79
HLA-A-206ENST00000479320 BRINP3Q76B58 766 aa26.24■■□□□ 1.79
HLA-A-206ENST00000479320 COL16A1Q07092 1604 aaPredicted RBP26.23■■□□□ 1.79
HLA-A-206ENST00000479320 AHDC1Q5TGY3 1603 aaPredicted RBP26.21■■□□□ 1.79
HLA-A-206ENST00000479320 PIK3C2GO75747 1445 aa26.21■■□□□ 1.79
HLA-A-206ENST00000479320 JCADQ9P266 1359 aa26.2■■□□□ 1.78
HLA-A-206ENST00000479320 TMEM132EQ6IEE7 984 aa26.17■■□□□ 1.78
HLA-A-206ENST00000479320 ASXL1Q8IXJ9 1541 aa26.17■■□□□ 1.78
HLA-A-206ENST00000479320 STK26Q9P289 416 aa26.16■■□□□ 1.78
HLA-A-206ENST00000479320 RGS17Q9UGC6 210 aaPredicted RBP26.15■■□□□ 1.78
HLA-A-206ENST00000479320 LRPPRCP42704 1394 aaKnown RBP26.14■■□□□ 1.78
HLA-A-206ENST00000479320 C14orf93Q9H972 538 aaKnown RBP26.14■■□□□ 1.77
HLA-A-206ENST00000479320 MYOM2P54296 1465 aa26.13■■□□□ 1.77
HLA-A-206ENST00000479320 NRXN1Q9ULB1 1477 aa26.13■■□□□ 1.77
HLA-A-206ENST00000479320 C1orf167Q5SNV9 1468 aa26.13■■□□□ 1.77
HLA-A-206ENST00000479320 ABCC11Q96J66 1382 aa26.13■■□□□ 1.77
HLA-A-206ENST00000479320 TECPR2O15040 1411 aa26.12■■□□□ 1.77
HLA-A-206ENST00000479320 NHSL1Q5SYE7 1610 aa26.12■■□□□ 1.77
HLA-A-206ENST00000479320 CFAP70Q5T0N1 1121 aa26.11■■□□□ 1.77
HLA-A-206ENST00000479320 WAPLQ7Z5K2 1190 aa26.11■■□□□ 1.77
HLA-A-206ENST00000479320 YTHDC2Q9H6S0 1430 aaKnown RBP26.1■■□□□ 1.77
HLA-A-206ENST00000479320 KNDC1Q76NI1 1749 aa26.1■■□□□ 1.77
HLA-A-206ENST00000479320 DDX17Q92841 729 aaKnown RBP26.09■■□□□ 1.77
HLA-A-206ENST00000479320 SPATA31A6Q5VVP1 1343 aa26.08■■□□□ 1.77
HLA-A-206ENST00000479320 SHPRHQ149N8 1683 aa26.08■■□□□ 1.77
HLA-A-206ENST00000479320 ORAI2Q96SN7 254 aa26.08■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms