RNA–Protein interactions for RNA: ENST00000478842.5

SSR3-207, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 3

Gene SSR3, Length 612 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-207ENST00000478842 KIAA1468Q9P260 1216 aa11.24□□□□□ -0.61
SSR3-207ENST00000478842 RABGEF1Q9UJ41 708 aa11.24□□□□□ -0.61
SSR3-207ENST00000478842 PSEN2P49810 448 aa11.22□□□□□ -0.61
SSR3-207ENST00000478842 ZCCHC6Q5VYS8 1495 aaKnown RBP11.22□□□□□ -0.61
SSR3-207ENST00000478842 C3orf80F5H4A9 247 aa11.21□□□□□ -0.61
SSR3-207ENST00000478842 RSPH4AQ5TD94 716 aa11.21□□□□□ -0.61
SSR3-207ENST00000478842 ZNF687Q8N1G0 1237 aa11.21□□□□□ -0.61
SSR3-207ENST00000478842 SCRIBQ14160 1630 aa11.2□□□□□ -0.62
SSR3-207ENST00000478842 CD46P15529 392 aa11.2□□□□□ -0.62
SSR3-207ENST00000478842 SMAPO00193 183 aa11.19□□□□□ -0.62
SSR3-207ENST00000478842 HDGFP51858 240 aaKnown RBP11.19□□□□□ -0.62
SSR3-207ENST00000478842 FLIIQ13045 1269 aa11.19□□□□□ -0.62
SSR3-207ENST00000478842 MARVELD3Q96A59 401 aa11.19□□□□□ -0.62
SSR3-207ENST00000478842 DDX11L8A8MPP1 907 aa11.18□□□□□ -0.62
SSR3-207ENST00000478842 MYSM1Q5VVJ2 828 aa11.18□□□□□ -0.62
SSR3-207ENST00000478842 TBC1D2Q9BYX2 928 aa11.18□□□□□ -0.62
SSR3-207ENST00000478842 ATP1B4Q9UN42 357 aaPredicted RBP11.18□□□□□ -0.62
SSR3-207ENST00000478842 FAM205CA6NFA0 338 aa11.17□□□□□ -0.62
SSR3-207ENST00000478842 SLC4A3P48751 1232 aa11.17□□□□□ -0.62
SSR3-207ENST00000478842 POTEEQ6S8J3 1075 aa11.17□□□□□ -0.62
SSR3-207ENST00000478842 DMRTA1Q5VZB9 504 aa11.16□□□□□ -0.62
SSR3-207ENST00000478842 NUTM1Q86Y26 1132 aa11.16□□□□□ -0.62
SSR3-207ENST00000478842 FAM163AQ96GL9 167 aaPredicted RBP11.16□□□□□ -0.62
SSR3-207ENST00000478842 NBPF3Q9H094 633 aa11.16□□□□□ -0.62
SSR3-207ENST00000478842 VPS9D1Q9Y2B5 631 aa11.16□□□□□ -0.62
SSR3-207ENST00000478842 AXIN2Q9Y2T1 843 aa11.16□□□□□ -0.62
SSR3-207ENST00000478842 CLK2P49760 499 aaKnown RBP11.15□□□□□ -0.62
SSR3-207ENST00000478842 FAM98CQ17RN3 349 aaKnown RBP11.15□□□□□ -0.62
SSR3-207ENST00000478842 LAPTM4BQ86VI4 370 aa11.15□□□□□ -0.62
SSR3-207ENST00000478842 SPIRE2Q8WWL2 714 aa11.15□□□□□ -0.62
SSR3-207ENST00000478842 POLR3EQ9NVU0 708 aa11.15□□□□□ -0.62
SSR3-207ENST00000478842 RDH13Q8NBN7 331 aa11.14□□□□□ -0.63
SSR3-207ENST00000478842 TK2O00142 265 aa11.13□□□□□ -0.63
SSR3-207ENST00000478842 GJA5P36382 358 aa11.12□□□□□ -0.63
SSR3-207ENST00000478842 HS3ST6Q96QI5 342 aa11.12□□□□□ -0.63
SSR3-207ENST00000478842 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.12□□□□□ -0.63
SSR3-207ENST00000478842 SEPT9Q9UHD8 586 aaPredicted RBP11.12□□□□□ -0.63
SSR3-207ENST00000478842 TUSC1Q2TAM9 212 aa11.11□□□□□ -0.63
SSR3-207ENST00000478842 SWT1Q5T5J6 900 aaKnown RBP11.11□□□□□ -0.63
SSR3-207ENST00000478842 PROCA1Q8NCQ7 364 aaPredicted RBP11.11□□□□□ -0.63
SSR3-207ENST00000478842 USP46P62068 366 aa11.1□□□□□ -0.63
SSR3-207ENST00000478842 RIC3Q7Z5B4 369 aa11.1□□□□□ -0.63
SSR3-207ENST00000478842 KDM4AO75164 1064 aa11.09□□□□□ -0.63
SSR3-207ENST00000478842 SLF2Q8IX21 1173 aa11.09□□□□□ -0.63
SSR3-207ENST00000478842 ZMYND15Q9H091 742 aa11.09□□□□□ -0.63
SSR3-207ENST00000478842 SPTLC1O15269 473 aa11.08□□□□□ -0.64
SSR3-207ENST00000478842 GCGRP47871 477 aa11.08□□□□□ -0.64
SSR3-207ENST00000478842 BHMG1C9JSJ3 638 aaPredicted RBP11.07□□□□□ -0.64
SSR3-207ENST00000478842 RSBN1LQ6PCB5 846 aaPredicted RBP11.07□□□□□ -0.64
SSR3-207ENST00000478842 NECTIN2Q92692 538 aa11.07□□□□□ -0.64
SSR3-207ENST00000478842 CUX2O14529 1486 aa11.06□□□□□ -0.64
SSR3-207ENST00000478842 LSM11P83369 360 aaKnown RBP eCLIP11.06□□□□□ -0.64
SSR3-207ENST00000478842 MRPL50Q8N5N7 158 aaKnown RBP11.06□□□□□ -0.64
SSR3-207ENST00000478842 LIMD1Q9UGP4 676 aa11.05□□□□□ -0.64
SSR3-207ENST00000478842 MOXD2PA6NHM9 499 aa11.04□□□□□ -0.64
SSR3-207ENST00000478842 PPP2R2DQ66LE6 453 aa11.04□□□□□ -0.64
SSR3-207ENST00000478842 ADGRD1Q6QNK2 874 aa11.04□□□□□ -0.64
SSR3-207ENST00000478842 SAMD7Q7Z3H4 446 aa11.04□□□□□ -0.64
SSR3-207ENST00000478842 SLC10A3P09131 477 aa11.03□□□□□ -0.64
SSR3-207ENST00000478842 GRIPAP1Q4V328 841 aa11.03□□□□□ -0.64
SSR3-207ENST00000478842 TMEM259Q4ZIN3 620 aa11.03□□□□□ -0.64
SSR3-207ENST00000478842 BANK1Q8NDB2 785 aa11.03□□□□□ -0.64
SSR3-207ENST00000478842 ZFRQ96KR1 1074 aaKnown RBP11.03□□□□□ -0.64
SSR3-207ENST00000478842 POTEB3A0JP26 581 aa11.02□□□□□ -0.65
SSR3-207ENST00000478842 RFC5P40937 340 aa11.02□□□□□ -0.65
SSR3-207ENST00000478842 POTEBQ6S5H4 581 aa11.02□□□□□ -0.65
SSR3-207ENST00000478842 STAC3Q96MF2 364 aa11.02□□□□□ -0.65
SSR3-207ENST00000478842 HOXA2O43364 376 aa11.01□□□□□ -0.65
SSR3-207ENST00000478842 MCM6Q14566 821 aa11.01□□□□□ -0.65
SSR3-207ENST00000478842 PRPF38BQ5VTL8 546 aaKnown RBP11.01□□□□□ -0.65
SSR3-207ENST00000478842 SPDYE5A6NIY4 337 aa10.99□□□□□ -0.65
SSR3-207ENST00000478842 UBTFP17480 764 aaKnown RBP10.99□□□□□ -0.65
SSR3-207ENST00000478842 NDUFV2P19404 249 aa10.99□□□□□ -0.65
SSR3-207ENST00000478842 LCE2DQ5TA82 110 aaPredicted RBP10.99□□□□□ -0.65
SSR3-207ENST00000478842 LRCH3Q96II8 777 aa10.99□□□□□ -0.65
SSR3-207ENST00000478842 HRO43593 1189 aa10.98□□□□□ -0.65
SSR3-207ENST00000478842 LILRB3O75022 631 aa10.98□□□□□ -0.65
SSR3-207ENST00000478842 RNF40O75150 1001 aa10.98□□□□□ -0.65
SSR3-207ENST00000478842 CFHP08603 1231 aa10.98□□□□□ -0.65
SSR3-207ENST00000478842 FDX1P10109 184 aa10.98□□□□□ -0.65
SSR3-207ENST00000478842 KMT5BQ4FZB7 885 aa10.98□□□□□ -0.65
SSR3-207ENST00000478842 NUTM2BA6NNL0 878 aaPredicted RBP10.97□□□□□ -0.65
SSR3-207ENST00000478842 NUTM2EB1AL46 878 aaPredicted RBP10.97□□□□□ -0.65
SSR3-207ENST00000478842 CSPP1Q1MSJ5 1256 aa10.97□□□□□ -0.65
SSR3-207ENST00000478842 NUTM2DQ5VT03 806 aaPredicted RBP10.97□□□□□ -0.65
SSR3-207ENST00000478842 NUTM2AQ8IVF1 878 aaPredicted RBP10.97□□□□□ -0.65
SSR3-207ENST00000478842 PRR14Q9BWN1 585 aa10.97□□□□□ -0.65
SSR3-207ENST00000478842 ZBTB3Q9H5J0 574 aa10.97□□□□□ -0.65
SSR3-207ENST00000478842 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.97□□□□□ -0.65
SSR3-207ENST00000478842 GOLGA8CPA6NN73 597 aa10.96□□□□□ -0.65
SSR3-207ENST00000478842 A6NJR5 290 aa10.95□□□□□ -0.66
SSR3-207ENST00000478842 SUPT5HO00267 1087 aaKnown RBP10.95□□□□□ -0.66
SSR3-207ENST00000478842 ANKRD13DQ6ZTN6 518 aa10.95□□□□□ -0.66
SSR3-207ENST00000478842 ANKK1Q8NFD2 765 aa10.95□□□□□ -0.66
SSR3-207ENST00000478842 PCDHB15Q9Y5E8 787 aa10.95□□□□□ -0.66
SSR3-207ENST00000478842 APBB1O00213 710 aa10.94□□□□□ -0.66
SSR3-207ENST00000478842 ATP6V1AP38606 617 aa10.94□□□□□ -0.66
SSR3-207ENST00000478842 QPCTQ16769 361 aa10.94□□□□□ -0.66
SSR3-207ENST00000478842 SOCS7O14512 581 aa10.93□□□□□ -0.66
SSR3-207ENST00000478842 RAD21O60216 631 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms