RNA–Protein interactions for RNA: ENST00000478800.1

CDKN1A-207, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

TSL 2

Gene CDKN1A, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-207ENST00000478800 ZNF326Q5BKZ1 582 aaKnown RBP25.23■■□□□ 1.63
CDKN1A-207ENST00000478800 SLC26A8Q96RN1 970 aa25.23■■□□□ 1.63
CDKN1A-207ENST00000478800 SPHKAPQ2M3C7 1700 aa25.22■■□□□ 1.63
CDKN1A-207ENST00000478800 ZFYVE9O95405 1425 aa25.21■■□□□ 1.63
CDKN1A-207ENST00000478800 SENP3Q9H4L4 574 aaPredicted RBP25.21■■□□□ 1.63
CDKN1A-207ENST00000478800 UBAP1LF5GYI3 381 aa25.2■■□□□ 1.62
CDKN1A-207ENST00000478800 NUTM2DQ5VT03 806 aaPredicted RBP25.2■■□□□ 1.62
CDKN1A-207ENST00000478800 MPHOSPH9Q99550 1183 aa25.2■■□□□ 1.62
CDKN1A-207ENST00000478800 PLEKHG1Q9ULL1 1385 aa25.19■■□□□ 1.62
CDKN1A-207ENST00000478800 TRPM2O94759 1503 aa25.19■■□□□ 1.62
CDKN1A-207ENST00000478800 DISP3Q9P2K9 1392 aa25.18■■□□□ 1.62
CDKN1A-207ENST00000478800 MYO5BQ9ULV0 1848 aa25.15■■□□□ 1.62
CDKN1A-207ENST00000478800 FOXD1Q16676 465 aa25.15■■□□□ 1.62
CDKN1A-207ENST00000478800 RAB3GAP2Q9H2M9 1393 aa25.15■■□□□ 1.62
CDKN1A-207ENST00000478800 KCNA6P17658 529 aa25.14■■□□□ 1.62
CDKN1A-207ENST00000478800 TOM1O60784 492 aa25.13■■□□□ 1.61
CDKN1A-207ENST00000478800 CLTCL1P53675 1640 aa25.12■■□□□ 1.61
CDKN1A-207ENST00000478800 TBX22Q9Y458 520 aa25.1■■□□□ 1.61
CDKN1A-207ENST00000478800 LRRC7Q96NW7 1537 aa25.1■■□□□ 1.61
CDKN1A-207ENST00000478800 SCAF1Q9H7N4 1312 aaKnown RBP25.09■■□□□ 1.61
CDKN1A-207ENST00000478800 ILDR2Q71H61 639 aa25.08■■□□□ 1.61
CDKN1A-207ENST00000478800 CCDC144AA2RUR9 1427 aa25.08■■□□□ 1.61
CDKN1A-207ENST00000478800 PROSER2Q86WR7 435 aaPredicted RBP25.07■■□□□ 1.6
CDKN1A-207ENST00000478800 PIP4K2BP78356 416 aa25.05■■□□□ 1.6
CDKN1A-207ENST00000478800 STRCP1A6NGW2 1772 aa25.05■■□□□ 1.6
CDKN1A-207ENST00000478800 KIF1BO60333 1816 aa25.03■■□□□ 1.6
CDKN1A-207ENST00000478800 VGFO15240 615 aaPredicted RBP25.03■■□□□ 1.6
CDKN1A-207ENST00000478800 HRCP23327 699 aa25.03■■□□□ 1.6
CDKN1A-207ENST00000478800 RPGRIP1LQ68CZ1 1315 aa25.03■■□□□ 1.6
CDKN1A-207ENST00000478800 ADAMTS13Q76LX8 1427 aa25.02■■□□□ 1.6
CDKN1A-207ENST00000478800 TMEM94Q12767 1356 aa25.01■■□□□ 1.59
CDKN1A-207ENST00000478800 DIP2AQ14689 1571 aa25.01■■□□□ 1.59
CDKN1A-207ENST00000478800 PIK3R4Q99570 1358 aa25■■□□□ 1.59
CDKN1A-207ENST00000478800 NKTRP30414 1462 aaKnown RBP25■■□□□ 1.59
CDKN1A-207ENST00000478800 NEXMIFQ5QGS0 1516 aa24.98■■□□□ 1.59
CDKN1A-207ENST00000478800 RGL3Q3MIN7 710 aa24.98■■□□□ 1.59
CDKN1A-207ENST00000478800 RBM33Q96EV2 1170 aaKnown RBP24.97■■□□□ 1.59
CDKN1A-207ENST00000478800 NWD1Q149M9 1564 aa24.97■■□□□ 1.59
CDKN1A-207ENST00000478800 AMOTL2Q9Y2J4 779 aa24.95■■□□□ 1.58
CDKN1A-207ENST00000478800 SETBP1Q9Y6X0 1596 aa24.94■■□□□ 1.58
CDKN1A-207ENST00000478800 C14orf37Q86TY3 774 aa24.94■■□□□ 1.58
CDKN1A-207ENST00000478800 SOCS7O14512 581 aa24.92■■□□□ 1.58
CDKN1A-207ENST00000478800 MSH6P52701 1360 aa24.92■■□□□ 1.58
CDKN1A-207ENST00000478800 CHD2O14647 1828 aaKnown RBP24.89■■□□□ 1.58
CDKN1A-207ENST00000478800 ANKRD30BQ9BXX2 1392 aa24.89■■□□□ 1.57
CDKN1A-207ENST00000478800 SPATA31E1Q6ZUB1 1445 aa24.88■■□□□ 1.57
CDKN1A-207ENST00000478800 METP08581 1390 aa24.88■■□□□ 1.57
CDKN1A-207ENST00000478800 NCOA3Q9Y6Q9 1424 aa24.86■■□□□ 1.57
CDKN1A-207ENST00000478800 NRXN3Q9Y4C0 1643 aa24.86■■□□□ 1.57
CDKN1A-207ENST00000478800 PTPRUQ92729 1446 aa24.86■■□□□ 1.57
CDKN1A-207ENST00000478800 HSPA1LP34931 641 aa24.85■■□□□ 1.57
CDKN1A-207ENST00000478800 ADGRF5Q8IZF2 1346 aa24.84■■□□□ 1.57
CDKN1A-207ENST00000478800 ALKQ9UM73 1620 aa24.83■■□□□ 1.57
CDKN1A-207ENST00000478800 XIRP1Q702N8 1843 aaKnown RBP24.83■■□□□ 1.57
CDKN1A-207ENST00000478800 PPLO60437 1756 aa24.82■■□□□ 1.56
CDKN1A-207ENST00000478800 C19orf44Q9H6X5 657 aa24.81■■□□□ 1.56
CDKN1A-207ENST00000478800 ATF3P18847 181 aa24.8■■□□□ 1.56
CDKN1A-207ENST00000478800 CADPS2Q86UW7 1296 aa24.79■■□□□ 1.56
CDKN1A-207ENST00000478800 SLAIN2Q9P270 581 aa24.79■■□□□ 1.56
CDKN1A-207ENST00000478800 FAM135BQ49AJ0 1406 aa24.76■■□□□ 1.55
CDKN1A-207ENST00000478800 XRN1Q8IZH2 1706 aaKnown RBP24.75■■□□□ 1.55
CDKN1A-207ENST00000478800 MED1Q15648 1581 aaPredicted RBP24.74■■□□□ 1.55
CDKN1A-207ENST00000478800 TRIM26Q12899 539 aaPredicted RBP24.72■■□□□ 1.55
CDKN1A-207ENST00000478800 PIK3C2GO75747 1445 aa24.71■■□□□ 1.55
CDKN1A-207ENST00000478800 STK26Q9P289 416 aa24.71■■□□□ 1.55
CDKN1A-207ENST00000478800 PTCH1Q13635 1447 aa24.7■■□□□ 1.55
CDKN1A-207ENST00000478800 DCAF11Q8TEB1 546 aa24.7■■□□□ 1.54
CDKN1A-207ENST00000478800 KDM2AQ9Y2K7 1162 aa24.7■■□□□ 1.54
CDKN1A-207ENST00000478800 MYOM2P54296 1465 aa24.7■■□□□ 1.54
CDKN1A-207ENST00000478800 IFT172Q9UG01 1749 aa24.69■■□□□ 1.54
CDKN1A-207ENST00000478800 DCCP43146 1447 aa24.69■■□□□ 1.54
CDKN1A-207ENST00000478800 TMEM132EQ6IEE7 984 aa24.68■■□□□ 1.54
CDKN1A-207ENST00000478800 STAC3Q96MF2 364 aa24.68■■□□□ 1.54
CDKN1A-207ENST00000478800 ROBO2Q9HCK4 1378 aa24.67■■□□□ 1.54
CDKN1A-207ENST00000478800 SETD1AO15047 1707 aaKnown RBP24.67■■□□□ 1.54
CDKN1A-207ENST00000478800 C14orf93Q9H972 538 aaKnown RBP24.67■■□□□ 1.54
CDKN1A-207ENST00000478800 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.66■■□□□ 1.54
CDKN1A-207ENST00000478800 ADGRL3Q9HAR2 1447 aa24.66■■□□□ 1.54
CDKN1A-207ENST00000478800 CFAP70Q5T0N1 1121 aa24.65■■□□□ 1.54
CDKN1A-207ENST00000478800 ROBO1Q9Y6N7 1651 aa24.65■■□□□ 1.54
CDKN1A-207ENST00000478800 LRPPRCP42704 1394 aaKnown RBP24.65■■□□□ 1.54
CDKN1A-207ENST00000478800 PRAG1Q86YV5 1406 aa24.64■■□□□ 1.54
CDKN1A-207ENST00000478800 NRXN1Q9ULB1 1477 aa24.64■■□□□ 1.53
CDKN1A-207ENST00000478800 DHX57Q6P158 1386 aaKnown RBP24.63■■□□□ 1.53
CDKN1A-207ENST00000478800 ABCC11Q96J66 1382 aa24.61■■□□□ 1.53
CDKN1A-207ENST00000478800 YTHDC2Q9H6S0 1430 aaKnown RBP24.6■■□□□ 1.53
CDKN1A-207ENST00000478800 WAPLQ7Z5K2 1190 aa24.58■■□□□ 1.53
CDKN1A-207ENST00000478800 TECPR2O15040 1411 aa24.58■■□□□ 1.53
CDKN1A-207ENST00000478800 LAMC1P11047 1609 aa24.57■■□□□ 1.52
CDKN1A-207ENST00000478800 BRINP3Q76B58 766 aa24.57■■□□□ 1.52
CDKN1A-207ENST00000478800 MST1RQ04912 1400 aa24.57■■□□□ 1.52
CDKN1A-207ENST00000478800 ASXL1Q8IXJ9 1541 aa24.56■■□□□ 1.52
CDKN1A-207ENST00000478800 NALCNQ8IZF0 1738 aa24.55■■□□□ 1.52
CDKN1A-207ENST00000478800 SIRT1Q96EB6 747 aa24.54■■□□□ 1.52
CDKN1A-207ENST00000478800 PHF23Q9BUL5 403 aaPredicted RBP24.53■■□□□ 1.52
CDKN1A-207ENST00000478800 POGKQ9P215 609 aa24.52■■□□□ 1.52
CDKN1A-207ENST00000478800 NEUROD1Q13562 356 aa24.51■■□□□ 1.51
CDKN1A-207ENST00000478800 PHLPP1O60346 1717 aa24.5■■□□□ 1.51
CDKN1A-207ENST00000478800 PLEKHH1Q9ULM0 1364 aa24.5■■□□□ 1.51
CDKN1A-207ENST00000478800 C1orf167Q5SNV9 1468 aa24.5■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms