RNA–Protein interactions for RNA: ENST00000478336.5

ARF1-208, Transcript of ADP ribosylation factor 1, humanhuman

TSL 2

Gene ARF1, Length 930 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARF1-208ENST00000478336 KIF1BO60333 1816 aa35.56■■■■□ 3.28
ARF1-208ENST00000478336 HDGFP51858 240 aaKnown RBP35.49■■■■□ 3.27
ARF1-208ENST00000478336 CERKQ8TCT0 537 aa35.48■■■■□ 3.27
ARF1-208ENST00000478336 PLEKHG1Q9ULL1 1385 aa35.48■■■■□ 3.27
ARF1-208ENST00000478336 CCDC144AA2RUR9 1427 aa35.48■■■■□ 3.27
ARF1-208ENST00000478336 ABCF1Q8NE71 845 aaKnown RBP eCLIP35.47■■■■□ 3.27
ARF1-208ENST00000478336 NEXMIFQ5QGS0 1516 aa35.44■■■■□ 3.26
ARF1-208ENST00000478336 PPP1R15AO75807 674 aaPredicted RBP35.44■■■■□ 3.26
ARF1-208ENST00000478336 TRIM26Q12899 539 aaPredicted RBP35.41■■■■□ 3.26
ARF1-208ENST00000478336 ZNF326Q5BKZ1 582 aaKnown RBP35.41■■■■□ 3.26
ARF1-208ENST00000478336 CPS1P31327 1500 aa35.41■■■■□ 3.26
ARF1-208ENST00000478336 NUTM2DQ5VT03 806 aaPredicted RBP35.4■■■■□ 3.26
ARF1-208ENST00000478336 STRCP1A6NGW2 1772 aa35.4■■■■□ 3.26
ARF1-208ENST00000478336 IQSEC2Q5JU85 1478 aa35.38■■■■□ 3.25
ARF1-208ENST00000478336 SPATA31E1Q6ZUB1 1445 aa35.37■■■■□ 3.25
ARF1-208ENST00000478336 SLC26A8Q96RN1 970 aa35.36■■■■□ 3.25
ARF1-208ENST00000478336 ANKRD30BQ9BXX2 1392 aa35.35■■■■□ 3.25
ARF1-208ENST00000478336 ADAMTS13Q76LX8 1427 aa35.34■■■■□ 3.25
ARF1-208ENST00000478336 BCANQ96GW7 911 aa35.32■■■■□ 3.24
ARF1-208ENST00000478336 DIP2AQ14689 1571 aa35.32■■■■□ 3.24
ARF1-208ENST00000478336 NRXN3Q9Y4C0 1643 aa35.32■■■■□ 3.24
ARF1-208ENST00000478336 PPLO60437 1756 aa35.31■■■■□ 3.24
ARF1-208ENST00000478336 SETBP1Q9Y6X0 1596 aa35.31■■■■□ 3.24
ARF1-208ENST00000478336 RPGRIP1LQ68CZ1 1315 aa35.31■■■■□ 3.24
ARF1-208ENST00000478336 SENP3Q9H4L4 574 aaPredicted RBP35.3■■■■□ 3.24
ARF1-208ENST00000478336 NWD1Q149M9 1564 aa35.28■■■■□ 3.24
ARF1-208ENST00000478336 TBX22Q9Y458 520 aa35.27■■■■□ 3.24
ARF1-208ENST00000478336 FBXO41Q8TF61 875 aa35.26■■■■□ 3.24
ARF1-208ENST00000478336 IFT172Q9UG01 1749 aa35.25■■■■□ 3.23
ARF1-208ENST00000478336 LRRC7Q96NW7 1537 aa35.24■■■■□ 3.23
ARF1-208ENST00000478336 KCNA6P17658 529 aa35.23■■■■□ 3.23
ARF1-208ENST00000478336 CHD2O14647 1828 aaKnown RBP35.22■■■■□ 3.23
ARF1-208ENST00000478336 VGFO15240 615 aaPredicted RBP35.2■■■■□ 3.23
ARF1-208ENST00000478336 RGL3Q3MIN7 710 aa35.2■■■■□ 3.23
ARF1-208ENST00000478336 ILDR1Q86SU0 546 aaPredicted RBP35.19■■■■□ 3.22
ARF1-208ENST00000478336 PIK3R4Q99570 1358 aa35.19■■■■□ 3.22
ARF1-208ENST00000478336 NKTRP30414 1462 aaKnown RBP35.18■■■■□ 3.22
ARF1-208ENST00000478336 SETD1AO15047 1707 aaKnown RBP35.14■■■■□ 3.22
ARF1-208ENST00000478336 XIRP1Q702N8 1843 aaKnown RBP35.13■■■■□ 3.21
ARF1-208ENST00000478336 ADGRF5Q8IZF2 1346 aa35.09■■■■□ 3.21
ARF1-208ENST00000478336 PTPRUQ92729 1446 aa35.09■■■■□ 3.21
ARF1-208ENST00000478336 METP08581 1390 aa35.09■■■■□ 3.21
ARF1-208ENST00000478336 ALKQ9UM73 1620 aa35.09■■■■□ 3.21
ARF1-208ENST00000478336 XRN1Q8IZH2 1706 aaKnown RBP35.07■■■■□ 3.2
ARF1-208ENST00000478336 MYOM2P54296 1465 aa35.07■■■■□ 3.2
ARF1-208ENST00000478336 TMEM94Q12767 1356 aa35.06■■■■□ 3.2
ARF1-208ENST00000478336 DHX57Q6P158 1386 aaKnown RBP35.05■■■■□ 3.2
ARF1-208ENST00000478336 NRXN1Q9ULB1 1477 aa35.04■■■■□ 3.2
ARF1-208ENST00000478336 PIK3C2GO75747 1445 aa35.04■■■■□ 3.2
ARF1-208ENST00000478336 PROSER2Q86WR7 435 aaPredicted RBP35.03■■■■□ 3.2
ARF1-208ENST00000478336 UBAP1LF5GYI3 381 aa35.01■■■■□ 3.2
ARF1-208ENST00000478336 AMOTL2Q9Y2J4 779 aa35.01■■■■□ 3.2
ARF1-208ENST00000478336 RBM33Q96EV2 1170 aaKnown RBP34.95■■■■□ 3.19
ARF1-208ENST00000478336 NCOA3Q9Y6Q9 1424 aa34.94■■■■□ 3.18
ARF1-208ENST00000478336 PRAG1Q86YV5 1406 aa34.93■■■■□ 3.18
ARF1-208ENST00000478336 TOM1O60784 492 aa34.93■■■■□ 3.18
ARF1-208ENST00000478336 ASXL1Q8IXJ9 1541 aa34.92■■■■□ 3.18
ARF1-208ENST00000478336 LAMC1P11047 1609 aa34.91■■■■□ 3.18
ARF1-208ENST00000478336 PTCH1Q13635 1447 aa34.89■■■■□ 3.18
ARF1-208ENST00000478336 DCAF11Q8TEB1 546 aa34.88■■■■□ 3.17
ARF1-208ENST00000478336 STAC3Q96MF2 364 aa34.88■■■■□ 3.17
ARF1-208ENST00000478336 C14orf93Q9H972 538 aaKnown RBP34.87■■■■□ 3.17
ARF1-208ENST00000478336 MSH6P52701 1360 aa34.86■■■■□ 3.17
ARF1-208ENST00000478336 PCGF6Q9BYE7 350 aa34.85■■■■□ 3.17
ARF1-208ENST00000478336 SIN3AQ96ST3 1273 aa34.83■■■■□ 3.17
ARF1-208ENST00000478336 KDM2AQ9Y2K7 1162 aa34.83■■■■□ 3.17
ARF1-208ENST00000478336 CFAP70Q5T0N1 1121 aa34.81■■■■□ 3.16
ARF1-208ENST00000478336 ROBO2Q9HCK4 1378 aa34.81■■■■□ 3.16
ARF1-208ENST00000478336 TECPR2O15040 1411 aa34.81■■■■□ 3.16
ARF1-208ENST00000478336 LRPPRCP42704 1394 aaKnown RBP34.8■■■■□ 3.16
ARF1-208ENST00000478336 KNDC1Q76NI1 1749 aa34.8■■■■□ 3.16
ARF1-208ENST00000478336 SIPA1L2Q9P2F8 1722 aaPredicted RBP34.79■■■■□ 3.16
ARF1-208ENST00000478336 PIP4K2BP78356 416 aa34.78■■■■□ 3.16
ARF1-208ENST00000478336 TMEM132EQ6IEE7 984 aa34.78■■■■□ 3.16
ARF1-208ENST00000478336 C14orf37Q86TY3 774 aa34.77■■■■□ 3.16
ARF1-208ENST00000478336 YTHDC2Q9H6S0 1430 aaKnown RBP34.77■■■■□ 3.16
ARF1-208ENST00000478336 ABCC11Q96J66 1382 aa34.75■■■■□ 3.15
ARF1-208ENST00000478336 NALCNQ8IZF0 1738 aa34.75■■■■□ 3.15
ARF1-208ENST00000478336 ADGRB1O14514 1584 aa34.75■■■■□ 3.15
ARF1-208ENST00000478336 ADGRL3Q9HAR2 1447 aa34.75■■■■□ 3.15
ARF1-208ENST00000478336 C19orf44Q9H6X5 657 aa34.75■■■■□ 3.15
ARF1-208ENST00000478336 SCAF1Q9H7N4 1312 aaKnown RBP34.75■■■■□ 3.15
ARF1-208ENST00000478336 DCCP43146 1447 aa34.73■■■■□ 3.15
ARF1-208ENST00000478336 NEUROD1Q13562 356 aa34.72■■■■□ 3.15
ARF1-208ENST00000478336 L3MBTL2Q969R5 705 aa34.7■■■■□ 3.15
ARF1-208ENST00000478336 STK26Q9P289 416 aa34.7■■■■□ 3.15
ARF1-208ENST00000478336 KIAA1210Q9ULL0 1709 aa34.67■■■■□ 3.14
ARF1-208ENST00000478336 FAM135BQ49AJ0 1406 aa34.67■■■■□ 3.14
ARF1-208ENST00000478336 CADPS2Q86UW7 1296 aa34.67■■■■□ 3.14
ARF1-208ENST00000478336 ROBO1Q9Y6N7 1651 aa34.65■■■■□ 3.14
ARF1-208ENST00000478336 ATF3P18847 181 aa34.64■■■■□ 3.14
ARF1-208ENST00000478336 SLAIN2Q9P270 581 aa34.64■■■■□ 3.14
ARF1-208ENST00000478336 DLC1Q96QB1 1528 aa34.63■■■■□ 3.13
ARF1-208ENST00000478336 SIRT1Q96EB6 747 aa34.62■■■■□ 3.13
ARF1-208ENST00000478336 PLEKHH1Q9ULM0 1364 aa34.62■■■■□ 3.13
ARF1-208ENST00000478336 WAPLQ7Z5K2 1190 aa34.6■■■■□ 3.13
ARF1-208ENST00000478336 MST1RQ04912 1400 aa34.59■■■■□ 3.13
ARF1-208ENST00000478336 HSPA1LP34931 641 aa34.59■■■■□ 3.13
ARF1-208ENST00000478336 CDC42BPGQ6DT37 1551 aa34.57■■■■□ 3.13
ARF1-208ENST00000478336 TONSLQ96HA7 1378 aa34.52■■■■□ 3.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms