RNA–Protein interactions for RNA: ENST00000478288.5

ABCF3-212, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 3

Gene ABCF3, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-212ENST00000478288 IQGAP3Q86VI3 1631 aa20.05■□□□□ 0.8
ABCF3-212ENST00000478288 FAM135BQ49AJ0 1406 aa20.04■□□□□ 0.8
ABCF3-212ENST00000478288 TMEM94Q12767 1356 aa20.04■□□□□ 0.8
ABCF3-212ENST00000478288 E9PCH4 1651 aa20.03■□□□□ 0.8
ABCF3-212ENST00000478288 PLEKHG1Q9ULL1 1385 aa20.03■□□□□ 0.8
ABCF3-212ENST00000478288 CHD2O14647 1828 aaKnown RBP20.02■□□□□ 0.79
ABCF3-212ENST00000478288 SLC26A8Q96RN1 970 aa20.01■□□□□ 0.79
ABCF3-212ENST00000478288 HDGFP51858 240 aaKnown RBP20■□□□□ 0.79
ABCF3-212ENST00000478288 RIMS2Q9UQ26 1411 aa20■□□□□ 0.79
ABCF3-212ENST00000478288 DIP2AQ14689 1571 aa19.97■□□□□ 0.79
ABCF3-212ENST00000478288 ROBO1Q9Y6N7 1651 aa19.97■□□□□ 0.79
ABCF3-212ENST00000478288 PHF23Q9BUL5 403 aaPredicted RBP19.96■□□□□ 0.79
ABCF3-212ENST00000478288 PROSER2Q86WR7 435 aaPredicted RBP19.95■□□□□ 0.78
ABCF3-212ENST00000478288 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.95■□□□□ 0.78
ABCF3-212ENST00000478288 NCOA3Q9Y6Q9 1424 aa19.94■□□□□ 0.78
ABCF3-212ENST00000478288 MSH6P52701 1360 aa19.94■□□□□ 0.78
ABCF3-212ENST00000478288 PPP1R15AO75807 674 aaPredicted RBP19.93■□□□□ 0.78
ABCF3-212ENST00000478288 TBX22Q9Y458 520 aa19.93■□□□□ 0.78
ABCF3-212ENST00000478288 BCANQ96GW7 911 aa19.92■□□□□ 0.78
ABCF3-212ENST00000478288 NUP155O75694 1391 aa19.92■□□□□ 0.78
ABCF3-212ENST00000478288 PIK3R4Q99570 1358 aa19.92■□□□□ 0.78
ABCF3-212ENST00000478288 ADAMTS13Q76LX8 1427 aa19.91■□□□□ 0.78
ABCF3-212ENST00000478288 SPHKAPQ2M3C7 1700 aa19.9■□□□□ 0.78
ABCF3-212ENST00000478288 SENP3Q9H4L4 574 aaPredicted RBP19.89■□□□□ 0.77
ABCF3-212ENST00000478288 TRPM2O94759 1503 aa19.86■□□□□ 0.77
ABCF3-212ENST00000478288 RBM33Q96EV2 1170 aaKnown RBP19.86■□□□□ 0.77
ABCF3-212ENST00000478288 CHGAP10645 457 aaKnown RBP19.85■□□□□ 0.77
ABCF3-212ENST00000478288 SLAIN2Q9P270 581 aa19.85■□□□□ 0.77
ABCF3-212ENST00000478288 PHLPP1O60346 1717 aa19.85■□□□□ 0.77
ABCF3-212ENST00000478288 RRBP1Q9P2E9 1410 aaKnown RBP19.84■□□□□ 0.77
ABCF3-212ENST00000478288 SETBP1Q9Y6X0 1596 aa19.83■□□□□ 0.77
ABCF3-212ENST00000478288 RGS17Q9UGC6 210 aaPredicted RBP19.83■□□□□ 0.77
ABCF3-212ENST00000478288 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.82■□□□□ 0.76
ABCF3-212ENST00000478288 NRXN3Q9Y4C0 1643 aa19.82■□□□□ 0.76
ABCF3-212ENST00000478288 ITGAEP38570 1179 aa19.81■□□□□ 0.76
ABCF3-212ENST00000478288 COL16A1Q07092 1604 aaPredicted RBP19.8■□□□□ 0.76
ABCF3-212ENST00000478288 XRN1Q8IZH2 1706 aaKnown RBP19.8■□□□□ 0.76
ABCF3-212ENST00000478288 CADPS2Q86UW7 1296 aa19.79■□□□□ 0.76
ABCF3-212ENST00000478288 JCADQ9P266 1359 aa19.79■□□□□ 0.76
ABCF3-212ENST00000478288 DCCP43146 1447 aa19.78■□□□□ 0.76
ABCF3-212ENST00000478288 AHDC1Q5TGY3 1603 aaPredicted RBP19.78■□□□□ 0.76
ABCF3-212ENST00000478288 C19orf44Q9H6X5 657 aa19.78■□□□□ 0.76
ABCF3-212ENST00000478288 NUTM2DQ5VT03 806 aaPredicted RBP19.77■□□□□ 0.76
ABCF3-212ENST00000478288 NAIPQ13075 1403 aa19.76■□□□□ 0.75
ABCF3-212ENST00000478288 PTPRUQ92729 1446 aa19.76■□□□□ 0.75
ABCF3-212ENST00000478288 KIF1BO60333 1816 aa19.76■□□□□ 0.75
ABCF3-212ENST00000478288 CLTCL1P53675 1640 aa19.76■□□□□ 0.75
ABCF3-212ENST00000478288 NEXMIFQ5QGS0 1516 aa19.75■□□□□ 0.75
ABCF3-212ENST00000478288 C14orf37Q86TY3 774 aa19.74■□□□□ 0.75
ABCF3-212ENST00000478288 AMOTL2Q9Y2J4 779 aa19.74■□□□□ 0.75
ABCF3-212ENST00000478288 SHPRHQ149N8 1683 aa19.73■□□□□ 0.75
ABCF3-212ENST00000478288 ATF3P18847 181 aa19.73■□□□□ 0.75
ABCF3-212ENST00000478288 PPARGC1BQ86YN6 1023 aaKnown RBP19.73■□□□□ 0.75
ABCF3-212ENST00000478288 HFM1A2PYH4 1435 aa19.71■□□□□ 0.75
ABCF3-212ENST00000478288 SPATA31A6Q5VVP1 1343 aa19.7■□□□□ 0.74
ABCF3-212ENST00000478288 ZNF326Q5BKZ1 582 aaKnown RBP19.69■□□□□ 0.74
ABCF3-212ENST00000478288 POTEAQ6S8J7 498 aa19.68■□□□□ 0.74
ABCF3-212ENST00000478288 METP08581 1390 aa19.68■□□□□ 0.74
ABCF3-212ENST00000478288 ASXL1Q8IXJ9 1541 aa19.66■□□□□ 0.74
ABCF3-212ENST00000478288 NHSL1Q5SYE7 1610 aa19.66■□□□□ 0.74
ABCF3-212ENST00000478288 SETD1AO15047 1707 aaKnown RBP19.66■□□□□ 0.74
ABCF3-212ENST00000478288 PRAG1Q86YV5 1406 aa19.66■□□□□ 0.74
ABCF3-212ENST00000478288 ADGRL3Q9HAR2 1447 aa19.66■□□□□ 0.74
ABCF3-212ENST00000478288 LRP6O75581 1613 aa19.65■□□□□ 0.74
ABCF3-212ENST00000478288 BRINP3Q76B58 766 aa19.65■□□□□ 0.74
ABCF3-212ENST00000478288 MST1RQ04912 1400 aa19.65■□□□□ 0.74
ABCF3-212ENST00000478288 PTCH1Q13635 1447 aa19.64■□□□□ 0.73
ABCF3-212ENST00000478288 NALCNQ8IZF0 1738 aa19.64■□□□□ 0.73
ABCF3-212ENST00000478288 SETD5Q9C0A6 1442 aa19.62■□□□□ 0.73
ABCF3-212ENST00000478288 PPLO60437 1756 aa19.62■□□□□ 0.73
ABCF3-212ENST00000478288 RPGRIP1LQ68CZ1 1315 aa19.61■□□□□ 0.73
ABCF3-212ENST00000478288 VGFO15240 615 aaPredicted RBP19.59■□□□□ 0.73
ABCF3-212ENST00000478288 LAMC1P11047 1609 aa19.58■□□□□ 0.73
ABCF3-212ENST00000478288 ZNF772Q68DY9 489 aaPredicted RBP19.58■□□□□ 0.72
ABCF3-212ENST00000478288 SLC4A1APQ9BWU0 796 aaKnown RBP19.57■□□□□ 0.72
ABCF3-212ENST00000478288 TRIM52Q96A61 297 aa19.56■□□□□ 0.72
ABCF3-212ENST00000478288 MEX3CQ5U5Q3 659 aaKnown RBP19.55■□□□□ 0.72
ABCF3-212ENST00000478288 C1orf167Q5SNV9 1468 aa19.54■□□□□ 0.72
ABCF3-212ENST00000478288 LRRC59Q96AG4 307 aaKnown RBP19.53■□□□□ 0.72
ABCF3-212ENST00000478288 ROBO2Q9HCK4 1378 aa19.52■□□□□ 0.72
ABCF3-212ENST00000478288 IFT172Q9UG01 1749 aa19.51■□□□□ 0.71
ABCF3-212ENST00000478288 CDK12Q9NYV4 1490 aaPredicted RBP19.5■□□□□ 0.71
ABCF3-212ENST00000478288 CCDC144AA2RUR9 1427 aa19.5■□□□□ 0.71
ABCF3-212ENST00000478288 PNPLA6Q8IY17 1366 aa19.49■□□□□ 0.71
ABCF3-212ENST00000478288 CDC42BPGQ6DT37 1551 aa19.49■□□□□ 0.71
ABCF3-212ENST00000478288 SPATA31E1Q6ZUB1 1445 aa19.48■□□□□ 0.71
ABCF3-212ENST00000478288 ACIN1Q9UKV3 1341 aaKnown RBP19.48■□□□□ 0.71
ABCF3-212ENST00000478288 TECPR2O15040 1411 aa19.47■□□□□ 0.71
ABCF3-212ENST00000478288 ANKRD30BQ9BXX2 1392 aa19.46■□□□□ 0.71
ABCF3-212ENST00000478288 KNDC1Q76NI1 1749 aa19.45■□□□□ 0.7
ABCF3-212ENST00000478288 SOS2Q07890 1332 aaPredicted RBP19.45■□□□□ 0.7
ABCF3-212ENST00000478288 NUTM2BA6NNL0 878 aaPredicted RBP19.44■□□□□ 0.7
ABCF3-212ENST00000478288 NUTM2EB1AL46 878 aaPredicted RBP19.44■□□□□ 0.7
ABCF3-212ENST00000478288 RXRBP28702 533 aa19.44■□□□□ 0.7
ABCF3-212ENST00000478288 NUTM2AQ8IVF1 878 aaPredicted RBP19.44■□□□□ 0.7
ABCF3-212ENST00000478288 AFF2P51816 1311 aa19.43■□□□□ 0.7
ABCF3-212ENST00000478288 COL22A1Q8NFW1 1626 aaPredicted RBP19.43■□□□□ 0.7
ABCF3-212ENST00000478288 DDX17Q92841 729 aaKnown RBP19.42■□□□□ 0.7
ABCF3-212ENST00000478288 PIK3C2GO75747 1445 aa19.42■□□□□ 0.7
ABCF3-212ENST00000478288 FOXD1Q16676 465 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms