RNA–Protein interactions for RNA: ENST00000478169.5

CCM2-210, Transcript of CCM2 scaffold protein, humanhuman

TSL 4

Gene CCM2, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-210ENST00000478169 NWD1Q149M9 1564 aa15.03■□□□□ -0
CCM2-210ENST00000478169 CHD2O14647 1828 aaKnown RBP15.02■□□□□ -0
CCM2-210ENST00000478169 HDGFP51858 240 aaKnown RBP15.01□□□□□ -0.01
CCM2-210ENST00000478169 ANKRD50Q9ULJ7 1429 aa15□□□□□ -0.01
CCM2-210ENST00000478169 BCANQ96GW7 911 aa15□□□□□ -0.01
CCM2-210ENST00000478169 MSH6P52701 1360 aa14.99□□□□□ -0.01
CCM2-210ENST00000478169 RBM33Q96EV2 1170 aaKnown RBP14.99□□□□□ -0.01
CCM2-210ENST00000478169 GCC2Q8IWJ2 1684 aa14.99□□□□□ -0.01
CCM2-210ENST00000478169 ZFYVE9O95405 1425 aa14.99□□□□□ -0.01
CCM2-210ENST00000478169 PLEKHG1Q9ULL1 1385 aa14.98□□□□□ -0.01
CCM2-210ENST00000478169 FAM50AQ14320 339 aaKnown RBP14.98□□□□□ -0.01
CCM2-210ENST00000478169 TMEM131LA2VDJ0 1609 aa14.97□□□□□ -0.01
CCM2-210ENST00000478169 SLAIN2Q9P270 581 aa14.97□□□□□ -0.01
CCM2-210ENST00000478169 PHLPP1O60346 1717 aa14.97□□□□□ -0.01
CCM2-210ENST00000478169 PPP1R15AO75807 674 aaPredicted RBP14.96□□□□□ -0.01
CCM2-210ENST00000478169 RIMS2Q9UQ26 1411 aa14.96□□□□□ -0.01
CCM2-210ENST00000478169 NCOA3Q9Y6Q9 1424 aa14.95□□□□□ -0.02
CCM2-210ENST00000478169 POTEAQ6S8J7 498 aa14.95□□□□□ -0.02
CCM2-210ENST00000478169 TBX22Q9Y458 520 aa14.95□□□□□ -0.02
CCM2-210ENST00000478169 UNC13BO14795 1591 aa14.94□□□□□ -0.02
CCM2-210ENST00000478169 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.94□□□□□ -0.02
CCM2-210ENST00000478169 JCADQ9P266 1359 aa14.93□□□□□ -0.02
CCM2-210ENST00000478169 E9PCH4 1651 aa14.92□□□□□ -0.02
CCM2-210ENST00000478169 DIP2AQ14689 1571 aa14.9□□□□□ -0.02
CCM2-210ENST00000478169 PIK3R4Q99570 1358 aa14.9□□□□□ -0.02
CCM2-210ENST00000478169 COL16A1Q07092 1604 aaPredicted RBP14.89□□□□□ -0.03
CCM2-210ENST00000478169 ROCK1Q13464 1354 aa14.89□□□□□ -0.03
CCM2-210ENST00000478169 IQGAP3Q86VI3 1631 aa14.89□□□□□ -0.03
CCM2-210ENST00000478169 CHGAP10645 457 aaKnown RBP14.89□□□□□ -0.03
CCM2-210ENST00000478169 ADAMTS13Q76LX8 1427 aa14.89□□□□□ -0.03
CCM2-210ENST00000478169 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.89□□□□□ -0.03
CCM2-210ENST00000478169 C14orf37Q86TY3 774 aa14.88□□□□□ -0.03
CCM2-210ENST00000478169 CADPS2Q86UW7 1296 aa14.88□□□□□ -0.03
CCM2-210ENST00000478169 C19orf44Q9H6X5 657 aa14.88□□□□□ -0.03
CCM2-210ENST00000478169 SPATA31A6Q5VVP1 1343 aa14.87□□□□□ -0.03
CCM2-210ENST00000478169 ATF3P18847 181 aa14.85□□□□□ -0.03
CCM2-210ENST00000478169 NUTM2DQ5VT03 806 aaPredicted RBP14.85□□□□□ -0.03
CCM2-210ENST00000478169 TRPM2O94759 1503 aa14.85□□□□□ -0.03
CCM2-210ENST00000478169 AHDC1Q5TGY3 1603 aaPredicted RBP14.84□□□□□ -0.03
CCM2-210ENST00000478169 NUP155O75694 1391 aa14.84□□□□□ -0.03
CCM2-210ENST00000478169 SHPRHQ149N8 1683 aa14.84□□□□□ -0.03
CCM2-210ENST00000478169 AMOTL2Q9Y2J4 779 aa14.83□□□□□ -0.04
CCM2-210ENST00000478169 SETD1AO15047 1707 aaKnown RBP14.83□□□□□ -0.04
CCM2-210ENST00000478169 ZNF772Q68DY9 489 aaPredicted RBP14.82□□□□□ -0.04
CCM2-210ENST00000478169 LRP6O75581 1613 aa14.81□□□□□ -0.04
CCM2-210ENST00000478169 MEX3CQ5U5Q3 659 aaKnown RBP14.81□□□□□ -0.04
CCM2-210ENST00000478169 DCCP43146 1447 aa14.81□□□□□ -0.04
CCM2-210ENST00000478169 PTPRUQ92729 1446 aa14.8□□□□□ -0.04
CCM2-210ENST00000478169 SPHKAPQ2M3C7 1700 aa14.8□□□□□ -0.04
CCM2-210ENST00000478169 XRN1Q8IZH2 1706 aaKnown RBP14.79□□□□□ -0.04
CCM2-210ENST00000478169 NRXN3Q9Y4C0 1643 aa14.79□□□□□ -0.04
CCM2-210ENST00000478169 SETBP1Q9Y6X0 1596 aa14.79□□□□□ -0.04
CCM2-210ENST00000478169 BRINP3Q76B58 766 aa14.78□□□□□ -0.04
CCM2-210ENST00000478169 ITGAEP38570 1179 aa14.76□□□□□ -0.05
CCM2-210ENST00000478169 ZNF326Q5BKZ1 582 aaKnown RBP14.75□□□□□ -0.05
CCM2-210ENST00000478169 ASXL1Q8IXJ9 1541 aa14.75□□□□□ -0.05
CCM2-210ENST00000478169 SETD5Q9C0A6 1442 aa14.75□□□□□ -0.05
CCM2-210ENST00000478169 NHSL1Q5SYE7 1610 aa14.74□□□□□ -0.05
CCM2-210ENST00000478169 MST1RQ04912 1400 aa14.74□□□□□ -0.05
CCM2-210ENST00000478169 METP08581 1390 aa14.73□□□□□ -0.05
CCM2-210ENST00000478169 KIF1BO60333 1816 aa14.73□□□□□ -0.05
CCM2-210ENST00000478169 RXRBP28702 533 aa14.73□□□□□ -0.05
CCM2-210ENST00000478169 LRRC59Q96AG4 307 aaKnown RBP14.73□□□□□ -0.05
CCM2-210ENST00000478169 UPF1Q92900 1129 aaKnown RBP eCLIP14.72□□□□□ -0.05
CCM2-210ENST00000478169 TRIM52Q96A61 297 aa14.72□□□□□ -0.05
CCM2-210ENST00000478169 CDK12Q9NYV4 1490 aaPredicted RBP14.71□□□□□ -0.05
CCM2-210ENST00000478169 NUTM2BA6NNL0 878 aaPredicted RBP14.71□□□□□ -0.05
CCM2-210ENST00000478169 NUTM2EB1AL46 878 aaPredicted RBP14.71□□□□□ -0.05
CCM2-210ENST00000478169 NUTM2AQ8IVF1 878 aaPredicted RBP14.71□□□□□ -0.05
CCM2-210ENST00000478169 ADGRL3Q9HAR2 1447 aa14.71□□□□□ -0.05
CCM2-210ENST00000478169 NEXMIFQ5QGS0 1516 aa14.71□□□□□ -0.06
CCM2-210ENST00000478169 CLTCL1P53675 1640 aa14.7□□□□□ -0.06
CCM2-210ENST00000478169 NALCNQ8IZF0 1738 aa14.69□□□□□ -0.06
CCM2-210ENST00000478169 AFF2P51816 1311 aa14.68□□□□□ -0.06
CCM2-210ENST00000478169 PNPLA6Q8IY17 1366 aa14.66□□□□□ -0.06
CCM2-210ENST00000478169 LAMC1P11047 1609 aa14.66□□□□□ -0.06
CCM2-210ENST00000478169 C1orf167Q5SNV9 1468 aa14.65□□□□□ -0.06
CCM2-210ENST00000478169 VGFO15240 615 aaPredicted RBP14.65□□□□□ -0.06
CCM2-210ENST00000478169 PTCH1Q13635 1447 aa14.65□□□□□ -0.06
CCM2-210ENST00000478169 RBM6P78332 1123 aaKnown RBP14.64□□□□□ -0.07
CCM2-210ENST00000478169 PPARGC1BQ86YN6 1023 aaKnown RBP14.64□□□□□ -0.07
CCM2-210ENST00000478169 DDX17Q92841 729 aaKnown RBP14.64□□□□□ -0.07
CCM2-210ENST00000478169 C8orf37Q96NL8 207 aa14.64□□□□□ -0.07
CCM2-210ENST00000478169 QTRT2Q9H974 415 aaKnown RBP14.63□□□□□ -0.07
CCM2-210ENST00000478169 NAIPQ13075 1403 aa14.63□□□□□ -0.07
CCM2-210ENST00000478169 RPGRIP1LQ68CZ1 1315 aa14.63□□□□□ -0.07
CCM2-210ENST00000478169 PRAG1Q86YV5 1406 aa14.62□□□□□ -0.07
CCM2-210ENST00000478169 RRBP1Q9P2E9 1410 aaKnown RBP14.62□□□□□ -0.07
CCM2-210ENST00000478169 PPLO60437 1756 aa14.61□□□□□ -0.07
CCM2-210ENST00000478169 SOS2Q07890 1332 aaPredicted RBP14.61□□□□□ -0.07
CCM2-210ENST00000478169 ROBO2Q9HCK4 1378 aa14.6□□□□□ -0.07
CCM2-210ENST00000478169 RGS12O14924 1447 aa14.6□□□□□ -0.07
CCM2-210ENST00000478169 NGLY1Q96IV0 654 aa14.6□□□□□ -0.07
CCM2-210ENST00000478169 HFM1A2PYH4 1435 aa14.59□□□□□ -0.07
CCM2-210ENST00000478169 ORAI2Q96SN7 254 aa14.59□□□□□ -0.07
CCM2-210ENST00000478169 ADAMTS2O95450 1211 aa14.58□□□□□ -0.08
CCM2-210ENST00000478169 COL22A1Q8NFW1 1626 aaPredicted RBP14.56□□□□□ -0.08
CCM2-210ENST00000478169 SLC4A1APQ9BWU0 796 aaKnown RBP14.56□□□□□ -0.08
CCM2-210ENST00000478169 FNBP4Q8N3X1 1017 aaPredicted RBP14.55□□□□□ -0.08
CCM2-210ENST00000478169 USP21Q9UK80 565 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms