RNA–Protein interactions for RNA: ENST00000477763.1

SMNDC1-205, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 2

Gene SMNDC1, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-205ENST00000477763 TRIM66O15016 1216 aa10.31□□□□□ -0.76
SMNDC1-205ENST00000477763 AMHR2Q16671 573 aa10.31□□□□□ -0.76
SMNDC1-205ENST00000477763 IFFO2Q5TF58 517 aa10.31□□□□□ -0.76
SMNDC1-205ENST00000477763 SAMD7Q7Z3H4 446 aa10.3□□□□□ -0.76
SMNDC1-205ENST00000477763 LRCH3Q96II8 777 aa10.3□□□□□ -0.76
SMNDC1-205ENST00000477763 SOWAHBA6NEL2 793 aa10.29□□□□□ -0.76
SMNDC1-205ENST00000477763 SWT1Q5T5J6 900 aaKnown RBP10.29□□□□□ -0.76
SMNDC1-205ENST00000477763 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.29□□□□□ -0.76
SMNDC1-205ENST00000477763 SLC4A3P48751 1232 aa10.28□□□□□ -0.76
SMNDC1-205ENST00000477763 DAXXQ9UER7 740 aaPredicted RBP10.28□□□□□ -0.76
SMNDC1-205ENST00000477763 CLCN1P35523 988 aa10.27□□□□□ -0.77
SMNDC1-205ENST00000477763 BCAMP50895 628 aa10.27□□□□□ -0.77
SMNDC1-205ENST00000477763 SLF2Q8IX21 1173 aa10.27□□□□□ -0.77
SMNDC1-205ENST00000477763 NECTIN2Q92692 538 aa10.26□□□□□ -0.77
SMNDC1-205ENST00000477763 TMUB1Q9BVT8 246 aa10.26□□□□□ -0.77
SMNDC1-205ENST00000477763 MDM2Q00987 491 aaPredicted RBP10.25□□□□□ -0.77
SMNDC1-205ENST00000477763 GPCPD1Q9NPB8 672 aa10.25□□□□□ -0.77
SMNDC1-205ENST00000477763 PDE4DQ08499 809 aa10.24□□□□□ -0.77
SMNDC1-205ENST00000477763 NLRP7Q8WX94 980 aa10.24□□□□□ -0.77
SMNDC1-205ENST00000477763 SULF1Q8IWU6 871 aa10.23□□□□□ -0.77
SMNDC1-205ENST00000477763 TSR3Q9UJK0 312 aaKnown RBP10.23□□□□□ -0.77
SMNDC1-205ENST00000477763 A0A0G2JS52 829 aa10.22□□□□□ -0.77
SMNDC1-205ENST00000477763 TTLL12Q14166 644 aaPredicted RBP10.22□□□□□ -0.77
SMNDC1-205ENST00000477763 RSPH4AQ5TD94 716 aa10.22□□□□□ -0.77
SMNDC1-205ENST00000477763 NYAP1Q6ZVC0 841 aa10.21□□□□□ -0.77
SMNDC1-205ENST00000477763 PARP9Q8IXQ6 854 aa10.21□□□□□ -0.77
SMNDC1-205ENST00000477763 HPS5Q9UPZ3 1129 aa10.21□□□□□ -0.77
SMNDC1-205ENST00000477763 PPP4CP60510 307 aa10.2□□□□□ -0.78
SMNDC1-205ENST00000477763 FAM217BQ9NTX9 383 aaPredicted RBP10.2□□□□□ -0.78
SMNDC1-205ENST00000477763 WBP1LQ9NX94 342 aa10.2□□□□□ -0.78
SMNDC1-205ENST00000477763 ITGBL1O95965 494 aaPredicted RBP10.19□□□□□ -0.78
SMNDC1-205ENST00000477763 REPIN1Q9BWE0 567 aaKnown RBP10.19□□□□□ -0.78
SMNDC1-205ENST00000477763 RNF40O75150 1001 aa10.18□□□□□ -0.78
SMNDC1-205ENST00000477763 GIGYF2Q6Y7W6 1299 aaKnown RBP10.18□□□□□ -0.78
SMNDC1-205ENST00000477763 DDX11L8A8MPP1 907 aa10.17□□□□□ -0.78
SMNDC1-205ENST00000477763 RGS20O76081 388 aa10.17□□□□□ -0.78
SMNDC1-205ENST00000477763 SLC10A3P09131 477 aa10.17□□□□□ -0.78
SMNDC1-205ENST00000477763 CD46P15529 392 aa10.16□□□□□ -0.78
SMNDC1-205ENST00000477763 PRR14Q9BWN1 585 aa10.16□□□□□ -0.78
SMNDC1-205ENST00000477763 SSTR3P32745 418 aaPredicted RBP10.15□□□□□ -0.78
SMNDC1-205ENST00000477763 RDH13Q8NBN7 331 aa10.15□□□□□ -0.78
SMNDC1-205ENST00000477763 CFHP08603 1231 aa10.13□□□□□ -0.79
SMNDC1-205ENST00000477763 KMT5BQ4FZB7 885 aa10.13□□□□□ -0.79
SMNDC1-205ENST00000477763 GCGRP47871 477 aa10.12□□□□□ -0.79
SMNDC1-205ENST00000477763 BRPF1P55201 1214 aaPredicted RBP10.11□□□□□ -0.79
SMNDC1-205ENST00000477763 KDM4CQ9H3R0 1056 aa10.11□□□□□ -0.79
SMNDC1-205ENST00000477763 ACTN4O43707 911 aaKnown RBP10.1□□□□□ -0.79
SMNDC1-205ENST00000477763 MS4A1P11836 297 aa10.1□□□□□ -0.79
SMNDC1-205ENST00000477763 APLP1P51693 650 aa10.1□□□□□ -0.79
SMNDC1-205ENST00000477763 NEUROD2Q15784 382 aa10.1□□□□□ -0.79
SMNDC1-205ENST00000477763 GPBP1L1Q9HC44 474 aaPredicted RBP10.1□□□□□ -0.79
SMNDC1-205ENST00000477763 KCNC4Q03721 635 aa10.08□□□□□ -0.8
SMNDC1-205ENST00000477763 BEGAINQ9BUH8 593 aa10.08□□□□□ -0.8
SMNDC1-205ENST00000477763 USP46P62068 366 aa10.07□□□□□ -0.8
SMNDC1-205ENST00000477763 KDM4AO75164 1064 aa10.06□□□□□ -0.8
SMNDC1-205ENST00000477763 IRX2Q9BZI1 471 aaPredicted RBP10.06□□□□□ -0.8
SMNDC1-205ENST00000477763 DIXDC1Q155Q3 683 aa10.05□□□□□ -0.8
SMNDC1-205ENST00000477763 DDRGK1Q96HY6 314 aa10.05□□□□□ -0.8
SMNDC1-205ENST00000477763 GRIPAP1Q4V328 841 aa10.04□□□□□ -0.8
SMNDC1-205ENST00000477763 NUTM1Q86Y26 1132 aa10.04□□□□□ -0.8
SMNDC1-205ENST00000477763 PCDHB3Q9Y5E6 796 aa10.04□□□□□ -0.8
SMNDC1-205ENST00000477763 ATP6V1AP38606 617 aa10.03□□□□□ -0.8
SMNDC1-205ENST00000477763 FUT2Q10981 343 aa10.03□□□□□ -0.8
SMNDC1-205ENST00000477763 SPIRE2Q8WWL2 714 aa10.02□□□□□ -0.81
SMNDC1-205ENST00000477763 FAM117AQ9C073 453 aa10.02□□□□□ -0.81
SMNDC1-205ENST00000477763 TJAP1Q5JTD0 557 aa10.01□□□□□ -0.81
SMNDC1-205ENST00000477763 HOXA2O43364 376 aa10□□□□□ -0.81
SMNDC1-205ENST00000477763 MORN1Q5T089 497 aa10□□□□□ -0.81
SMNDC1-205ENST00000477763 MTRQ99707 1265 aa10□□□□□ -0.81
SMNDC1-205ENST00000477763 IL21Q9HBE4 155 aa10□□□□□ -0.81
SMNDC1-205ENST00000477763 NR1I2O75469 434 aa9.99□□□□□ -0.81
SMNDC1-205ENST00000477763 TBC1D2Q9BYX2 928 aa9.99□□□□□ -0.81
SMNDC1-205ENST00000477763 RSPH6AQ9H0K4 717 aa9.99□□□□□ -0.81
SMNDC1-205ENST00000477763 PLEKHG3A1L390 1219 aa9.98□□□□□ -0.81
SMNDC1-205ENST00000477763 GJA5P36382 358 aa9.98□□□□□ -0.81
SMNDC1-205ENST00000477763 BLOC1S3Q6QNY0 202 aa9.98□□□□□ -0.81
SMNDC1-205ENST00000477763 COPS2P61201 443 aa9.96□□□□□ -0.82
SMNDC1-205ENST00000477763 PUS10Q3MIT2 529 aaKnown RBP9.96□□□□□ -0.82
SMNDC1-205ENST00000477763 SALL2Q9Y467 1007 aaPredicted RBP9.96□□□□□ -0.82
SMNDC1-205ENST00000477763 ZPR1O75312 459 aa9.95□□□□□ -0.82
SMNDC1-205ENST00000477763 MYSM1Q5VVJ2 828 aa9.95□□□□□ -0.82
SMNDC1-205ENST00000477763 SCUBE3Q8IX30 993 aa9.95□□□□□ -0.82
SMNDC1-205ENST00000477763 MOXD2PA6NHM9 499 aa9.94□□□□□ -0.82
SMNDC1-205ENST00000477763 SPTLC1O15269 473 aa9.94□□□□□ -0.82
SMNDC1-205ENST00000477763 Q3C1V9 767 aa9.94□□□□□ -0.82
SMNDC1-205ENST00000477763 SH3D19Q5HYK7 790 aa9.94□□□□□ -0.82
SMNDC1-205ENST00000477763 GOPCQ9HD26 462 aa9.94□□□□□ -0.82
SMNDC1-205ENST00000477763 SLC27A5Q9Y2P5 690 aa9.94□□□□□ -0.82
SMNDC1-205ENST00000477763 TUSC1Q2TAM9 212 aa9.93□□□□□ -0.82
SMNDC1-205ENST00000477763 RSBN1LQ6PCB5 846 aaPredicted RBP9.93□□□□□ -0.82
SMNDC1-205ENST00000477763 IL27Q8NEV9 243 aa9.93□□□□□ -0.82
SMNDC1-205ENST00000477763 ZNF516Q92618 1163 aa9.93□□□□□ -0.82
SMNDC1-205ENST00000477763 FDX1P10109 184 aa9.92□□□□□ -0.82
SMNDC1-205ENST00000477763 SKIV2LQ15477 1246 aaKnown RBP9.91□□□□□ -0.82
SMNDC1-205ENST00000477763 RIC3Q7Z5B4 369 aa9.91□□□□□ -0.82
SMNDC1-205ENST00000477763 HLA-CQ95604 372 aa9.91□□□□□ -0.82
SMNDC1-205ENST00000477763 THAP11Q96EK4 314 aa9.91□□□□□ -0.82
SMNDC1-205ENST00000477763 FMNL1O95466 1100 aaPredicted RBP9.9□□□□□ -0.82
SMNDC1-205ENST00000477763 NDUFV2P19404 249 aa9.9□□□□□ -0.82
SMNDC1-205ENST00000477763 CLK2P49760 499 aaKnown RBP9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 181.9 ms