RNA–Protein interactions for RNA: ENST00000477596.1

SF1-214, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 802 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-214ENST00000477596 SENP3Q9H4L4 574 aaPredicted RBP33.32■■■□□ 2.92
SF1-214ENST00000477596 STRCP1A6NGW2 1772 aa33.31■■■□□ 2.92
SF1-214ENST00000477596 NUTM2DQ5VT03 806 aaPredicted RBP33.28■■■□□ 2.92
SF1-214ENST00000477596 FBXO41Q8TF61 875 aa33.28■■■□□ 2.92
SF1-214ENST00000477596 KIF1BO60333 1816 aa33.25■■■□□ 2.91
SF1-214ENST00000477596 CPS1P31327 1500 aa33.24■■■□□ 2.91
SF1-214ENST00000477596 PPP1R15AO75807 674 aaPredicted RBP33.24■■■□□ 2.91
SF1-214ENST00000477596 PLEKHG1Q9ULL1 1385 aa33.23■■■□□ 2.91
SF1-214ENST00000477596 SLC26A8Q96RN1 970 aa33.23■■■□□ 2.91
SF1-214ENST00000477596 IQSEC2Q5JU85 1478 aa33.21■■■□□ 2.91
SF1-214ENST00000477596 ZNF326Q5BKZ1 582 aaKnown RBP33.19■■■□□ 2.9
SF1-214ENST00000477596 BCANQ96GW7 911 aa33.19■■■□□ 2.9
SF1-214ENST00000477596 NEXMIFQ5QGS0 1516 aa33.18■■■□□ 2.9
SF1-214ENST00000477596 ABCF1Q8NE71 845 aaKnown RBP eCLIP33.18■■■□□ 2.9
SF1-214ENST00000477596 ACIN1Q9UKV3 1341 aaKnown RBP33.18■■■□□ 2.9
SF1-214ENST00000477596 HDGFP51858 240 aaKnown RBP33.16■■■□□ 2.9
SF1-214ENST00000477596 CCDC144AA2RUR9 1427 aa33.14■■■□□ 2.9
SF1-214ENST00000477596 ADAMTS13Q76LX8 1427 aa33.13■■■□□ 2.89
SF1-214ENST00000477596 LRRC7Q96NW7 1537 aa33.12■■■□□ 2.89
SF1-214ENST00000477596 NRXN3Q9Y4C0 1643 aa33.11■■■□□ 2.89
SF1-214ENST00000477596 NWD1Q149M9 1564 aa33.09■■■□□ 2.89
SF1-214ENST00000477596 HRCP23327 699 aa33.08■■■□□ 2.89
SF1-214ENST00000477596 DIP2AQ14689 1571 aa33.06■■■□□ 2.88
SF1-214ENST00000477596 SETBP1Q9Y6X0 1596 aa33.05■■■□□ 2.88
SF1-214ENST00000477596 SPATA31E1Q6ZUB1 1445 aa33.04■■■□□ 2.88
SF1-214ENST00000477596 PPLO60437 1756 aa33.04■■■□□ 2.88
SF1-214ENST00000477596 XIRP1Q702N8 1843 aaKnown RBP33.04■■■□□ 2.88
SF1-214ENST00000477596 KCNA6P17658 529 aa33.03■■■□□ 2.88
SF1-214ENST00000477596 CHD2O14647 1828 aaKnown RBP33.02■■■□□ 2.88
SF1-214ENST00000477596 TBX22Q9Y458 520 aa33.01■■■□□ 2.87
SF1-214ENST00000477596 UBAP1LF5GYI3 381 aa32.99■■■□□ 2.87
SF1-214ENST00000477596 ANKRD30BQ9BXX2 1392 aa32.98■■■□□ 2.87
SF1-214ENST00000477596 NKTRP30414 1462 aaKnown RBP32.98■■■□□ 2.87
SF1-214ENST00000477596 RGL3Q3MIN7 710 aa32.97■■■□□ 2.87
SF1-214ENST00000477596 IFT172Q9UG01 1749 aa32.97■■■□□ 2.87
SF1-214ENST00000477596 ALKQ9UM73 1620 aa32.96■■■□□ 2.87
SF1-214ENST00000477596 RBM33Q96EV2 1170 aaKnown RBP32.95■■■□□ 2.87
SF1-214ENST00000477596 RPGRIP1LQ68CZ1 1315 aa32.95■■■□□ 2.86
SF1-214ENST00000477596 PTPRUQ92729 1446 aa32.94■■■□□ 2.86
SF1-214ENST00000477596 TMEM94Q12767 1356 aa32.94■■■□□ 2.86
SF1-214ENST00000477596 SETD1AO15047 1707 aaKnown RBP32.91■■■□□ 2.86
SF1-214ENST00000477596 METP08581 1390 aa32.91■■■□□ 2.86
SF1-214ENST00000477596 PIK3R4Q99570 1358 aa32.91■■■□□ 2.86
SF1-214ENST00000477596 VGFO15240 615 aaPredicted RBP32.9■■■□□ 2.86
SF1-214ENST00000477596 PROSER2Q86WR7 435 aaPredicted RBP32.9■■■□□ 2.86
SF1-214ENST00000477596 XRN1Q8IZH2 1706 aaKnown RBP32.88■■■□□ 2.85
SF1-214ENST00000477596 ADGRF5Q8IZF2 1346 aa32.87■■■□□ 2.85
SF1-214ENST00000477596 TRIM26Q12899 539 aaPredicted RBP32.84■■■□□ 2.85
SF1-214ENST00000477596 TOM1O60784 492 aa32.83■■■□□ 2.85
SF1-214ENST00000477596 PIP4K2BP78356 416 aa32.83■■■□□ 2.85
SF1-214ENST00000477596 AMOTL2Q9Y2J4 779 aa32.83■■■□□ 2.85
SF1-214ENST00000477596 SCAF1Q9H7N4 1312 aaKnown RBP32.82■■■□□ 2.84
SF1-214ENST00000477596 PIK3C2GO75747 1445 aa32.77■■■□□ 2.84
SF1-214ENST00000477596 MYOM2P54296 1465 aa32.75■■■□□ 2.83
SF1-214ENST00000477596 ASXL1Q8IXJ9 1541 aa32.73■■■□□ 2.83
SF1-214ENST00000477596 NRXN1Q9ULB1 1477 aa32.73■■■□□ 2.83
SF1-214ENST00000477596 MSH6P52701 1360 aa32.71■■■□□ 2.83
SF1-214ENST00000477596 C14orf37Q86TY3 774 aa32.68■■■□□ 2.82
SF1-214ENST00000477596 SIPA1L2Q9P2F8 1722 aaPredicted RBP32.68■■■□□ 2.82
SF1-214ENST00000477596 NCOA3Q9Y6Q9 1424 aa32.68■■■□□ 2.82
SF1-214ENST00000477596 DHX57Q6P158 1386 aaKnown RBP32.66■■■□□ 2.82
SF1-214ENST00000477596 ROBO2Q9HCK4 1378 aa32.65■■■□□ 2.82
SF1-214ENST00000477596 PTCH1Q13635 1447 aa32.65■■■□□ 2.82
SF1-214ENST00000477596 PRAG1Q86YV5 1406 aa32.63■■■□□ 2.81
SF1-214ENST00000477596 HSPA1LP34931 641 aa32.63■■■□□ 2.81
SF1-214ENST00000477596 NALCNQ8IZF0 1738 aa32.63■■■□□ 2.81
SF1-214ENST00000477596 DCAF11Q8TEB1 546 aa32.62■■■□□ 2.81
SF1-214ENST00000477596 TMEM132EQ6IEE7 984 aa32.61■■■□□ 2.81
SF1-214ENST00000477596 KDM2AQ9Y2K7 1162 aa32.61■■■□□ 2.81
SF1-214ENST00000477596 LAMC1P11047 1609 aa32.61■■■□□ 2.81
SF1-214ENST00000477596 ROBO1Q9Y6N7 1651 aa32.59■■■□□ 2.81
SF1-214ENST00000477596 CFAP70Q5T0N1 1121 aa32.59■■■□□ 2.81
SF1-214ENST00000477596 ADGRL3Q9HAR2 1447 aa32.58■■■□□ 2.81
SF1-214ENST00000477596 C19orf44Q9H6X5 657 aa32.57■■■□□ 2.8
SF1-214ENST00000477596 C14orf93Q9H972 538 aaKnown RBP32.57■■■□□ 2.8
SF1-214ENST00000477596 STK26Q9P289 416 aa32.57■■■□□ 2.8
SF1-214ENST00000477596 KNDC1Q76NI1 1749 aa32.56■■■□□ 2.8
SF1-214ENST00000477596 LRPPRCP42704 1394 aaKnown RBP32.56■■■□□ 2.8
SF1-214ENST00000477596 TECPR2O15040 1411 aa32.54■■■□□ 2.8
SF1-214ENST00000477596 FAM135BQ49AJ0 1406 aa32.54■■■□□ 2.8
SF1-214ENST00000477596 SIN3AQ96ST3 1273 aa32.54■■■□□ 2.8
SF1-214ENST00000477596 YTHDC2Q9H6S0 1430 aaKnown RBP32.53■■■□□ 2.8
SF1-214ENST00000477596 SLAIN2Q9P270 581 aa32.53■■■□□ 2.8
SF1-214ENST00000477596 DCCP43146 1447 aa32.52■■■□□ 2.8
SF1-214ENST00000477596 ATF3P18847 181 aa32.51■■■□□ 2.79
SF1-214ENST00000477596 ADGRB1O14514 1584 aa32.5■■■□□ 2.79
SF1-214ENST00000477596 CADPS2Q86UW7 1296 aa32.5■■■□□ 2.79
SF1-214ENST00000477596 ABCC11Q96J66 1382 aa32.48■■■□□ 2.79
SF1-214ENST00000477596 PLEKHH1Q9ULM0 1364 aa32.48■■■□□ 2.79
SF1-214ENST00000477596 MST1RQ04912 1400 aa32.46■■■□□ 2.79
SF1-214ENST00000477596 WAPLQ7Z5K2 1190 aa32.45■■■□□ 2.79
SF1-214ENST00000477596 NEUROD1Q13562 356 aa32.44■■■□□ 2.78
SF1-214ENST00000477596 STAC3Q96MF2 364 aa32.42■■■□□ 2.78
SF1-214ENST00000477596 PCGF6Q9BYE7 350 aa32.39■■■□□ 2.78
SF1-214ENST00000477596 CDC42BPGQ6DT37 1551 aa32.38■■■□□ 2.77
SF1-214ENST00000477596 L3MBTL2Q969R5 705 aa32.38■■■□□ 2.77
SF1-214ENST00000477596 PHLPP1O60346 1717 aa32.37■■■□□ 2.77
SF1-214ENST00000477596 DLC1Q96QB1 1528 aa32.36■■■□□ 2.77
SF1-214ENST00000477596 BRINP3Q76B58 766 aa32.36■■■□□ 2.77
SF1-214ENST00000477596 C1orf167Q5SNV9 1468 aa32.34■■■□□ 2.77
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms