RNA–Protein interactions for RNA: ENST00000477508.1

TOP3A-205, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 600 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-205ENST00000477508 ANKRD30BQ9BXX2 1392 aa19.23■□□□□ 0.67
TOP3A-205ENST00000477508 PCGF6Q9BYE7 350 aa19.23■□□□□ 0.67
TOP3A-205ENST00000477508 MYO5BQ9ULV0 1848 aa19.23■□□□□ 0.67
TOP3A-205ENST00000477508 LTKP29376 864 aa19.22■□□□□ 0.67
TOP3A-205ENST00000477508 ZNF326Q5BKZ1 582 aaKnown RBP19.22■□□□□ 0.67
TOP3A-205ENST00000477508 RIMS2Q9UQ26 1411 aa19.22■□□□□ 0.67
TOP3A-205ENST00000477508 NPHP4O75161 1426 aaPredicted RBP19.21■□□□□ 0.67
TOP3A-205ENST00000477508 ZFYVE9O95405 1425 aa19.21■□□□□ 0.67
TOP3A-205ENST00000477508 NEURL4Q96JN8 1562 aa19.2■□□□□ 0.66
TOP3A-205ENST00000477508 RPGRIP1LQ68CZ1 1315 aa19.2■□□□□ 0.66
TOP3A-205ENST00000477508 PPP1R15AO75807 674 aaPredicted RBP19.19■□□□□ 0.66
TOP3A-205ENST00000477508 IQGAP1P46940 1657 aa19.17■□□□□ 0.66
TOP3A-205ENST00000477508 PLEKHG1Q9ULL1 1385 aa19.16■□□□□ 0.66
TOP3A-205ENST00000477508 SPATA31E1Q6ZUB1 1445 aa19.16■□□□□ 0.66
TOP3A-205ENST00000477508 VGFO15240 615 aaPredicted RBP19.15■□□□□ 0.66
TOP3A-205ENST00000477508 DHX57Q6P158 1386 aaKnown RBP19.14■□□□□ 0.65
TOP3A-205ENST00000477508 BCANQ96GW7 911 aa19.13■□□□□ 0.65
TOP3A-205ENST00000477508 NEXMIFQ5QGS0 1516 aa19.12■□□□□ 0.65
TOP3A-205ENST00000477508 RGL3Q3MIN7 710 aa19.12■□□□□ 0.65
TOP3A-205ENST00000477508 FBXO41Q8TF61 875 aa19.12■□□□□ 0.65
TOP3A-205ENST00000477508 NUTM2DQ5VT03 806 aaPredicted RBP19.09■□□□□ 0.65
TOP3A-205ENST00000477508 STAC3Q96MF2 364 aa19.09■□□□□ 0.65
TOP3A-205ENST00000477508 TBX22Q9Y458 520 aa19.09■□□□□ 0.65
TOP3A-205ENST00000477508 PPLO60437 1756 aa19.07■□□□□ 0.64
TOP3A-205ENST00000477508 SLC26A8Q96RN1 970 aa19.07■□□□□ 0.64
TOP3A-205ENST00000477508 DIP2AQ14689 1571 aa19.06■□□□□ 0.64
TOP3A-205ENST00000477508 SETBP1Q9Y6X0 1596 aa19.06■□□□□ 0.64
TOP3A-205ENST00000477508 ZNF335Q9H4Z2 1342 aaPredicted RBP19.04■□□□□ 0.64
TOP3A-205ENST00000477508 PIK3R4Q99570 1358 aa19.04■□□□□ 0.64
TOP3A-205ENST00000477508 IFT172Q9UG01 1749 aa19.03■□□□□ 0.64
TOP3A-205ENST00000477508 ADAMTS13Q76LX8 1427 aa19.03■□□□□ 0.64
TOP3A-205ENST00000477508 CPS1P31327 1500 aa19.02■□□□□ 0.64
TOP3A-205ENST00000477508 PIAS4Q8N2W9 510 aaPredicted RBP19.02■□□□□ 0.64
TOP3A-205ENST00000477508 LTBP4Q8N2S1 1624 aa19.01■□□□□ 0.63
TOP3A-205ENST00000477508 KCNA6P17658 529 aa19.01■□□□□ 0.63
TOP3A-205ENST00000477508 MYOM2P54296 1465 aa19.01■□□□□ 0.63
TOP3A-205ENST00000477508 ADGRF5Q8IZF2 1346 aa19■□□□□ 0.63
TOP3A-205ENST00000477508 CLSPNQ9HAW4 1339 aa19■□□□□ 0.63
TOP3A-205ENST00000477508 DCAF11Q8TEB1 546 aa18.99■□□□□ 0.63
TOP3A-205ENST00000477508 NRXN3Q9Y4C0 1643 aa18.99■□□□□ 0.63
TOP3A-205ENST00000477508 CERKQ8TCT0 537 aa18.98■□□□□ 0.63
TOP3A-205ENST00000477508 SIN3AQ96ST3 1273 aa18.98■□□□□ 0.63
TOP3A-205ENST00000477508 NEUROD1Q13562 356 aa18.97■□□□□ 0.63
TOP3A-205ENST00000477508 NRXN1Q9ULB1 1477 aa18.97■□□□□ 0.63
TOP3A-205ENST00000477508 PIK3C2GO75747 1445 aa18.96■□□□□ 0.63
TOP3A-205ENST00000477508 IQSEC2Q5JU85 1478 aa18.96■□□□□ 0.63
TOP3A-205ENST00000477508 ALKQ9UM73 1620 aa18.96■□□□□ 0.63
TOP3A-205ENST00000477508 CHD2O14647 1828 aaKnown RBP18.95■□□□□ 0.62
TOP3A-205ENST00000477508 KDM2AQ9Y2K7 1162 aa18.95■□□□□ 0.62
TOP3A-205ENST00000477508 NWD1Q149M9 1564 aa18.94■□□□□ 0.62
TOP3A-205ENST00000477508 NKTRP30414 1462 aaKnown RBP18.94■□□□□ 0.62
TOP3A-205ENST00000477508 C14orf93Q9H972 538 aaKnown RBP18.93■□□□□ 0.62
TOP3A-205ENST00000477508 METP08581 1390 aa18.93■□□□□ 0.62
TOP3A-205ENST00000477508 STRCP1A6NGW2 1772 aa18.92■□□□□ 0.62
TOP3A-205ENST00000477508 AMOTL2Q9Y2J4 779 aa18.92■□□□□ 0.62
TOP3A-205ENST00000477508 PROSER2Q86WR7 435 aaPredicted RBP18.91■□□□□ 0.62
TOP3A-205ENST00000477508 CCER1Q8TC90 406 aaPredicted RBP18.91■□□□□ 0.62
TOP3A-205ENST00000477508 L3MBTL2Q969R5 705 aa18.91■□□□□ 0.62
TOP3A-205ENST00000477508 LAMC1P11047 1609 aa18.91■□□□□ 0.62
TOP3A-205ENST00000477508 LRRC7Q96NW7 1537 aa18.9■□□□□ 0.62
TOP3A-205ENST00000477508 SETD1AO15047 1707 aaKnown RBP18.9■□□□□ 0.62
TOP3A-205ENST00000477508 TONSLQ96HA7 1378 aa18.89■□□□□ 0.61
TOP3A-205ENST00000477508 PTPRUQ92729 1446 aa18.88■□□□□ 0.61
TOP3A-205ENST00000477508 CFAP70Q5T0N1 1121 aa18.87■□□□□ 0.61
TOP3A-205ENST00000477508 NCOA3Q9Y6Q9 1424 aa18.87■□□□□ 0.61
TOP3A-205ENST00000477508 XRN1Q8IZH2 1706 aaKnown RBP18.86■□□□□ 0.61
TOP3A-205ENST00000477508 PRAG1Q86YV5 1406 aa18.86■□□□□ 0.61
TOP3A-205ENST00000477508 TIMELESSQ9UNS1 1208 aa18.86■□□□□ 0.61
TOP3A-205ENST00000477508 TMEM94Q12767 1356 aa18.85■□□□□ 0.61
TOP3A-205ENST00000477508 LRPPRCP42704 1394 aaKnown RBP18.84■□□□□ 0.61
TOP3A-205ENST00000477508 ABCC11Q96J66 1382 aa18.84■□□□□ 0.61
TOP3A-205ENST00000477508 PTCH1Q13635 1447 aa18.83■□□□□ 0.61
TOP3A-205ENST00000477508 TMEM132EQ6IEE7 984 aa18.83■□□□□ 0.6
TOP3A-205ENST00000477508 KIAA1210Q9ULL0 1709 aa18.83■□□□□ 0.6
TOP3A-205ENST00000477508 TECPR2O15040 1411 aa18.82■□□□□ 0.6
TOP3A-205ENST00000477508 YTHDC2Q9H6S0 1430 aaKnown RBP18.82■□□□□ 0.6
TOP3A-205ENST00000477508 TOM1O60784 492 aa18.81■□□□□ 0.6
TOP3A-205ENST00000477508 SIRT1Q96EB6 747 aa18.81■□□□□ 0.6
TOP3A-205ENST00000477508 ASXL1Q8IXJ9 1541 aa18.8■□□□□ 0.6
TOP3A-205ENST00000477508 C14orf37Q86TY3 774 aa18.8■□□□□ 0.6
TOP3A-205ENST00000477508 STK26Q9P289 416 aa18.8■□□□□ 0.6
TOP3A-205ENST00000477508 MSH6P52701 1360 aa18.8■□□□□ 0.6
TOP3A-205ENST00000477508 C19orf44Q9H6X5 657 aa18.79■□□□□ 0.6
TOP3A-205ENST00000477508 XIRP1Q702N8 1843 aaKnown RBP18.79■□□□□ 0.6
TOP3A-205ENST00000477508 KNDC1Q76NI1 1749 aa18.78■□□□□ 0.6
TOP3A-205ENST00000477508 ADGRB1O14514 1584 aa18.78■□□□□ 0.6
TOP3A-205ENST00000477508 UBAP1LF5GYI3 381 aa18.78■□□□□ 0.6
TOP3A-205ENST00000477508 ROBO2Q9HCK4 1378 aa18.78■□□□□ 0.6
TOP3A-205ENST00000477508 FAM135BQ49AJ0 1406 aa18.77■□□□□ 0.6
TOP3A-205ENST00000477508 RBM33Q96EV2 1170 aaKnown RBP18.77■□□□□ 0.6
TOP3A-205ENST00000477508 CADPS2Q86UW7 1296 aa18.75■□□□□ 0.59
TOP3A-205ENST00000477508 DLC1Q96QB1 1528 aa18.74■□□□□ 0.59
TOP3A-205ENST00000477508 ATF3P18847 181 aa18.74■□□□□ 0.59
TOP3A-205ENST00000477508 DCCP43146 1447 aa18.74■□□□□ 0.59
TOP3A-205ENST00000477508 ADGRL3Q9HAR2 1447 aa18.73■□□□□ 0.59
TOP3A-205ENST00000477508 NBPF1Q3BBV0 1214 aa18.72■□□□□ 0.59
TOP3A-205ENST00000477508 POGKQ9P215 609 aa18.72■□□□□ 0.59
TOP3A-205ENST00000477508 TRAK1Q9UPV9 953 aa18.72■□□□□ 0.59
TOP3A-205ENST00000477508 TRPM1Q7Z4N2 1603 aa18.71■□□□□ 0.59
TOP3A-205ENST00000477508 NBPF8Q3BBV2 869 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms