RNA–Protein interactions for RNA: ENST00000477345.1

TPRN-203, Transcript of taperin, humanhuman

TSL 1 (best)

Gene TPRN, Length 3,350 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPRN-203ENST00000477345 PANK2Q9BZ23 570 aa16.51■□□□□ 0.23
TPRN-203ENST00000477345 CHMP4BQ9H444 224 aaKnown RBP16.51■□□□□ 0.23
TPRN-203ENST00000477345 APAF1O14727 1248 aa16.51■□□□□ 0.23
TPRN-203ENST00000477345 TPM2P07951 284 aa16.5■□□□□ 0.23
TPRN-203ENST00000477345 C8orf34Q49A92 452 aa16.5■□□□□ 0.23
TPRN-203ENST00000477345 GGT6Q6P531 493 aa16.5■□□□□ 0.23
TPRN-203ENST00000477345 SPAG9O60271 1321 aaKnown RBP16.5■□□□□ 0.23
TPRN-203ENST00000477345 DNMT1P26358 1616 aaKnown RBP16.5■□□□□ 0.23
TPRN-203ENST00000477345 GOLGA2Q08379 1002 aa16.49■□□□□ 0.23
TPRN-203ENST00000477345 PDE3BQ13370 1112 aa16.49■□□□□ 0.23
TPRN-203ENST00000477345 NPM1P06748 294 aaKnown RBP eCLIP16.48■□□□□ 0.23
TPRN-203ENST00000477345 MFAP1P55081 439 aaKnown RBP16.48■□□□□ 0.23
TPRN-203ENST00000477345 PLEKHH2Q8IVE3 1493 aa16.47■□□□□ 0.23
TPRN-203ENST00000477345 BRD4O60885 1362 aaPredicted RBP16.47■□□□□ 0.23
TPRN-203ENST00000477345 PAXIP1Q6ZW49 1069 aaPredicted RBP16.46■□□□□ 0.23
TPRN-203ENST00000477345 CCDC144AA2RUR9 1427 aa16.45■□□□□ 0.22
TPRN-203ENST00000477345 GOLGA6L3A6NEY3 463 aa16.45■□□□□ 0.22
TPRN-203ENST00000477345 TEX14Q8IWB6 1497 aa16.45■□□□□ 0.22
TPRN-203ENST00000477345 IGHDP01880 384 aa16.44■□□□□ 0.22
TPRN-203ENST00000477345 TPRNQ4KMQ1 711 aa16.44■□□□□ 0.22
TPRN-203ENST00000477345 GTF2E1P29083 439 aaPredicted RBP16.44■□□□□ 0.22
TPRN-203ENST00000477345 ZHX1Q9UKY1 873 aaPredicted RBP16.43■□□□□ 0.22
TPRN-203ENST00000477345 GCC2Q8IWJ2 1684 aa16.43■□□□□ 0.22
TPRN-203ENST00000477345 ABCC10Q5T3U5 1492 aa16.43■□□□□ 0.22
TPRN-203ENST00000477345 SYCP2Q9BX26 1530 aa16.43■□□□□ 0.22
TPRN-203ENST00000477345 TRIM44Q96DX7 344 aaPredicted RBP16.43■□□□□ 0.22
TPRN-203ENST00000477345 KLHL34Q8N239 644 aa16.41■□□□□ 0.22
TPRN-203ENST00000477345 SPINK5Q9NQ38 1064 aaPredicted RBP16.41■□□□□ 0.22
TPRN-203ENST00000477345 SPATA31E1Q6ZUB1 1445 aa16.41■□□□□ 0.22
TPRN-203ENST00000477345 ABCA8O94911 1581 aa16.41■□□□□ 0.22
TPRN-203ENST00000477345 XRCC6P12956 609 aaKnown RBP eCLIP16.4■□□□□ 0.22
TPRN-203ENST00000477345 NCLP19338 710 aaKnown RBP16.4■□□□□ 0.22
TPRN-203ENST00000477345 SAFB2Q14151 953 aaKnown RBP eCLIP16.4■□□□□ 0.22
TPRN-203ENST00000477345 TMF1P82094 1093 aa16.4■□□□□ 0.22
TPRN-203ENST00000477345 TRAPPC8Q9Y2L5 1435 aa16.39■□□□□ 0.21
TPRN-203ENST00000477345 TNNQ9UQP3 1299 aa16.39■□□□□ 0.21
TPRN-203ENST00000477345 CYB5RLQ6IPT4 315 aa16.39■□□□□ 0.21
TPRN-203ENST00000477345 STAC3Q96MF2 364 aa16.39■□□□□ 0.21
TPRN-203ENST00000477345 CCDC141Q6ZP82 1450 aa16.39■□□□□ 0.21
TPRN-203ENST00000477345 ESPNB1AK53 854 aa16.38■□□□□ 0.21
TPRN-203ENST00000477345 RSPH4AQ5TD94 716 aa16.38■□□□□ 0.21
TPRN-203ENST00000477345 PLPPR3Q6T4P5 718 aa16.38■□□□□ 0.21
TPRN-203ENST00000477345 SCAPERQ9BY12 1400 aa16.38■□□□□ 0.21
TPRN-203ENST00000477345 MBD5Q9P267 1494 aa16.38■□□□□ 0.21
TPRN-203ENST00000477345 CHD1O14646 1710 aa16.37■□□□□ 0.21
TPRN-203ENST00000477345 DUSP27Q5VZP5 1158 aa16.37■□□□□ 0.21
TPRN-203ENST00000477345 RAPGEF3O95398 923 aa16.36■□□□□ 0.21
TPRN-203ENST00000477345 IPO4Q8TEX9 1081 aaKnown RBP16.36■□□□□ 0.21
TPRN-203ENST00000477345 SMAP1Q8IYB5 467 aaPredicted RBP16.35■□□□□ 0.21
TPRN-203ENST00000477345 DMRT2Q9Y5R5 561 aa16.35■□□□□ 0.21
TPRN-203ENST00000477345 KIAA1211Q6ZU35 1233 aa16.34■□□□□ 0.21
TPRN-203ENST00000477345 OSCARQ8IYS5 282 aa16.34■□□□□ 0.21
TPRN-203ENST00000477345 CFAP70Q5T0N1 1121 aa16.34■□□□□ 0.21
TPRN-203ENST00000477345 MAP7D2Q96T17 732 aa16.34■□□□□ 0.21
TPRN-203ENST00000477345 MYH16Q9H6N6 1097 aa16.34■□□□□ 0.21
TPRN-203ENST00000477345 CDC42BPAQ5VT25 1732 aa16.33■□□□□ 0.21
TPRN-203ENST00000477345 PLEKHH1Q9ULM0 1364 aa16.33■□□□□ 0.2
TPRN-203ENST00000477345 LRPPRCP42704 1394 aaKnown RBP16.33■□□□□ 0.2
TPRN-203ENST00000477345 PPP2R1AP30153 589 aa16.33■□□□□ 0.2
TPRN-203ENST00000477345 FAM13BQ9NYF5 915 aa16.33■□□□□ 0.2
TPRN-203ENST00000477345 FTSJ3Q8IY81 847 aaKnown RBP16.32■□□□□ 0.2
TPRN-203ENST00000477345 ARHGEF12Q9NZN5 1544 aa16.32■□□□□ 0.2
TPRN-203ENST00000477345 ITSN2Q9NZM3 1697 aa16.32■□□□□ 0.2
TPRN-203ENST00000477345 TTC37Q6PGP7 1564 aa16.32■□□□□ 0.2
TPRN-203ENST00000477345 TBC1D2Q9BYX2 928 aa16.31■□□□□ 0.2
TPRN-203ENST00000477345 BCORL1Q5H9F3 1711 aa16.31■□□□□ 0.2
TPRN-203ENST00000477345 SAMD9LQ8IVG5 1584 aa16.31■□□□□ 0.2
TPRN-203ENST00000477345 MLECQ14165 292 aa16.31■□□□□ 0.2
TPRN-203ENST00000477345 TMEM132EQ6IEE7 984 aa16.31■□□□□ 0.2
TPRN-203ENST00000477345 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.31■□□□□ 0.2
TPRN-203ENST00000477345 KDM2BQ8NHM5 1336 aa16.3■□□□□ 0.2
TPRN-203ENST00000477345 PRDM10Q9NQV6 1147 aa16.3■□□□□ 0.2
TPRN-203ENST00000477345 DISP3Q9P2K9 1392 aa16.3■□□□□ 0.2
TPRN-203ENST00000477345 TRAK2O60296 914 aa16.3■□□□□ 0.2
TPRN-203ENST00000477345 TRAK1Q9UPV9 953 aa16.29■□□□□ 0.2
TPRN-203ENST00000477345 ADGRL2O95490 1459 aa16.29■□□□□ 0.2
TPRN-203ENST00000477345 FAM135AQ9P2D6 1515 aa16.29■□□□□ 0.2
TPRN-203ENST00000477345 PDZRN3Q9UPQ7 1066 aa16.28■□□□□ 0.2
TPRN-203ENST00000477345 PER1O15534 1290 aaPredicted RBP16.28■□□□□ 0.2
TPRN-203ENST00000477345 HSP90AB1P08238 724 aaKnown RBP16.27■□□□□ 0.2
TPRN-203ENST00000477345 STK26Q9P289 416 aa16.27■□□□□ 0.2
TPRN-203ENST00000477345 ERBB4Q15303 1308 aa16.26■□□□□ 0.19
TPRN-203ENST00000477345 HSCBQ8IWL3 235 aa16.26■□□□□ 0.19
TPRN-203ENST00000477345 PLCD3Q8N3E9 789 aa16.26■□□□□ 0.19
TPRN-203ENST00000477345 FOXD4L5Q5VV16 416 aaPredicted RBP16.25■□□□□ 0.19
TPRN-203ENST00000477345 FOXD4L4Q8WXT5 416 aaPredicted RBP16.25■□□□□ 0.19
TPRN-203ENST00000477345 MCM4P33991 863 aa16.25■□□□□ 0.19
TPRN-203ENST00000477345 PLCH2O75038 1416 aa16.24■□□□□ 0.19
TPRN-203ENST00000477345 SLFN5Q08AF3 891 aa16.24■□□□□ 0.19
TPRN-203ENST00000477345 FSD2A1L4K1 749 aa16.24■□□□□ 0.19
TPRN-203ENST00000477345 MRE11P49959 708 aa16.24■□□□□ 0.19
TPRN-203ENST00000477345 ITPRIPQ8IWB1 547 aa16.24■□□□□ 0.19
TPRN-203ENST00000477345 ANP32BQ92688 251 aaKnown RBP16.24■□□□□ 0.19
TPRN-203ENST00000477345 PLA2R1Q13018 1463 aa16.24■□□□□ 0.19
TPRN-203ENST00000477345 MPNDQ8N594 471 aa16.24■□□□□ 0.19
TPRN-203ENST00000477345 ABCC2Q92887 1545 aa16.23■□□□□ 0.19
TPRN-203ENST00000477345 PCDHB15Q9Y5E8 787 aa16.23■□□□□ 0.19
TPRN-203ENST00000477345 ADGRF5Q8IZF2 1346 aa16.22■□□□□ 0.19
TPRN-203ENST00000477345 C22orf23Q9BZE7 217 aa16.22■□□□□ 0.19
TPRN-203ENST00000477345 U2SURPO15042 1029 aaKnown RBP16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms