RNA–Protein interactions for RNA: ENST00000477306.1

HDGF-207, Transcript of heparin binding growth factor, humanhuman

TSL 2

Gene HDGF, Length 686 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGF-207ENST00000477306 RGS17Q9UGC6 210 aaPredicted RBP22.42■■□□□ 1.18
HDGF-207ENST00000477306 NWD1Q149M9 1564 aa22.42■■□□□ 1.18
HDGF-207ENST00000477306 NKTRP30414 1462 aaKnown RBP22.41■■□□□ 1.18
HDGF-207ENST00000477306 ROBO1Q9Y6N7 1651 aa22.41■■□□□ 1.18
HDGF-207ENST00000477306 MYO5BQ9ULV0 1848 aa22.39■■□□□ 1.17
HDGF-207ENST00000477306 GCC2Q8IWJ2 1684 aa22.39■■□□□ 1.17
HDGF-207ENST00000477306 ZFYVE9O95405 1425 aa22.39■■□□□ 1.17
HDGF-207ENST00000477306 PPP1R15AO75807 674 aaPredicted RBP22.37■■□□□ 1.17
HDGF-207ENST00000477306 RIMS2Q9UQ26 1411 aa22.37■■□□□ 1.17
HDGF-207ENST00000477306 MSH6P52701 1360 aa22.37■■□□□ 1.17
HDGF-207ENST00000477306 PLEKHG1Q9ULL1 1385 aa22.37■■□□□ 1.17
HDGF-207ENST00000477306 TMEM131LA2VDJ0 1609 aa22.35■■□□□ 1.17
HDGF-207ENST00000477306 UNC13BO14795 1591 aa22.34■■□□□ 1.17
HDGF-207ENST00000477306 CHGAP10645 457 aaKnown RBP22.34■■□□□ 1.17
HDGF-207ENST00000477306 HDGFP51858 240 aaKnown RBP22.33■■□□□ 1.17
HDGF-207ENST00000477306 CHD2O14647 1828 aaKnown RBP22.32■■□□□ 1.16
HDGF-207ENST00000477306 SLAIN2Q9P270 581 aa22.31■■□□□ 1.16
HDGF-207ENST00000477306 E9PCH4 1651 aa22.3■■□□□ 1.16
HDGF-207ENST00000477306 NUTM2DQ5VT03 806 aaPredicted RBP22.29■■□□□ 1.16
HDGF-207ENST00000477306 POTEAQ6S8J7 498 aa22.29■■□□□ 1.16
HDGF-207ENST00000477306 TBX22Q9Y458 520 aa22.29■■□□□ 1.16
HDGF-207ENST00000477306 PHLPP1O60346 1717 aa22.28■■□□□ 1.16
HDGF-207ENST00000477306 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.28■■□□□ 1.16
HDGF-207ENST00000477306 ROCK1Q13464 1354 aa22.27■■□□□ 1.16
HDGF-207ENST00000477306 IQGAP3Q86VI3 1631 aa22.26■■□□□ 1.15
HDGF-207ENST00000477306 ADAMTS13Q76LX8 1427 aa22.25■■□□□ 1.15
HDGF-207ENST00000477306 C14orf37Q86TY3 774 aa22.25■■□□□ 1.15
HDGF-207ENST00000477306 JCADQ9P266 1359 aa22.24■■□□□ 1.15
HDGF-207ENST00000477306 DIP2AQ14689 1571 aa22.22■■□□□ 1.15
HDGF-207ENST00000477306 ITGAEP38570 1179 aa22.22■■□□□ 1.15
HDGF-207ENST00000477306 NUP155O75694 1391 aa22.22■■□□□ 1.15
HDGF-207ENST00000477306 NCOA3Q9Y6Q9 1424 aa22.22■■□□□ 1.15
HDGF-207ENST00000477306 COL16A1Q07092 1604 aaPredicted RBP22.2■■□□□ 1.14
HDGF-207ENST00000477306 PIK3R4Q99570 1358 aa22.19■■□□□ 1.14
HDGF-207ENST00000477306 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.18■■□□□ 1.14
HDGF-207ENST00000477306 CADPS2Q86UW7 1296 aa22.17■■□□□ 1.14
HDGF-207ENST00000477306 C19orf44Q9H6X5 657 aa22.17■■□□□ 1.14
HDGF-207ENST00000477306 TRPM2O94759 1503 aa22.16■■□□□ 1.14
HDGF-207ENST00000477306 ATF3P18847 181 aa22.16■■□□□ 1.14
HDGF-207ENST00000477306 PTPRUQ92729 1446 aa22.15■■□□□ 1.14
HDGF-207ENST00000477306 AMOTL2Q9Y2J4 779 aa22.15■■□□□ 1.14
HDGF-207ENST00000477306 PPARGC1BQ86YN6 1023 aaKnown RBP22.14■■□□□ 1.13
HDGF-207ENST00000477306 LRP6O75581 1613 aa22.13■■□□□ 1.13
HDGF-207ENST00000477306 SETD1AO15047 1707 aaKnown RBP22.12■■□□□ 1.13
HDGF-207ENST00000477306 AHDC1Q5TGY3 1603 aaPredicted RBP22.12■■□□□ 1.13
HDGF-207ENST00000477306 SPATA31A6Q5VVP1 1343 aa22.11■■□□□ 1.13
HDGF-207ENST00000477306 SPHKAPQ2M3C7 1700 aa22.1■■□□□ 1.13
HDGF-207ENST00000477306 MEX3CQ5U5Q3 659 aaKnown RBP22.1■■□□□ 1.13
HDGF-207ENST00000477306 NRXN3Q9Y4C0 1643 aa22.09■■□□□ 1.13
HDGF-207ENST00000477306 ZNF326Q5BKZ1 582 aaKnown RBP22.09■■□□□ 1.13
HDGF-207ENST00000477306 BRINP3Q76B58 766 aa22.08■■□□□ 1.13
HDGF-207ENST00000477306 SETBP1Q9Y6X0 1596 aa22.08■■□□□ 1.12
HDGF-207ENST00000477306 SHPRHQ149N8 1683 aa22.07■■□□□ 1.12
HDGF-207ENST00000477306 XRN1Q8IZH2 1706 aaKnown RBP22.07■■□□□ 1.12
HDGF-207ENST00000477306 DCCP43146 1447 aa22.05■■□□□ 1.12
HDGF-207ENST00000477306 RRBP1Q9P2E9 1410 aaKnown RBP22.05■■□□□ 1.12
HDGF-207ENST00000477306 METP08581 1390 aa22.04■■□□□ 1.12
HDGF-207ENST00000477306 ZNF772Q68DY9 489 aaPredicted RBP22.03■■□□□ 1.12
HDGF-207ENST00000477306 ASXL1Q8IXJ9 1541 aa22.02■■□□□ 1.12
HDGF-207ENST00000477306 MST1RQ04912 1400 aa22.01■■□□□ 1.11
HDGF-207ENST00000477306 NUTM2BA6NNL0 878 aaPredicted RBP22.01■■□□□ 1.11
HDGF-207ENST00000477306 NUTM2EB1AL46 878 aaPredicted RBP22.01■■□□□ 1.11
HDGF-207ENST00000477306 NUTM2AQ8IVF1 878 aaPredicted RBP22.01■■□□□ 1.11
HDGF-207ENST00000477306 CLTCL1P53675 1640 aa22.01■■□□□ 1.11
HDGF-207ENST00000477306 TRIM52Q96A61 297 aa22■■□□□ 1.11
HDGF-207ENST00000477306 NEXMIFQ5QGS0 1516 aa21.99■■□□□ 1.11
HDGF-207ENST00000477306 NHSL1Q5SYE7 1610 aa21.97■■□□□ 1.11
HDGF-207ENST00000477306 SETD5Q9C0A6 1442 aa21.97■■□□□ 1.11
HDGF-207ENST00000477306 ADGRL3Q9HAR2 1447 aa21.97■■□□□ 1.11
HDGF-207ENST00000477306 NALCNQ8IZF0 1738 aa21.94■■□□□ 1.1
HDGF-207ENST00000477306 DDX17Q92841 729 aaKnown RBP21.94■■□□□ 1.1
HDGF-207ENST00000477306 NAIPQ13075 1403 aa21.94■■□□□ 1.1
HDGF-207ENST00000477306 KIF1BO60333 1816 aa21.94■■□□□ 1.1
HDGF-207ENST00000477306 RXRBP28702 533 aa21.93■■□□□ 1.1
HDGF-207ENST00000477306 LRRC59Q96AG4 307 aaKnown RBP21.93■■□□□ 1.1
HDGF-207ENST00000477306 AFF2P51816 1311 aa21.92■■□□□ 1.1
HDGF-207ENST00000477306 UPF1Q92900 1129 aaKnown RBP eCLIP21.92■■□□□ 1.14e-30■■■■■ 53.6
HDGF-207ENST00000477306 PNPLA6Q8IY17 1366 aa21.88■■□□□ 1.09
HDGF-207ENST00000477306 HFM1A2PYH4 1435 aa21.88■■□□□ 1.09
HDGF-207ENST00000477306 VGFO15240 615 aaPredicted RBP21.87■■□□□ 1.09
HDGF-207ENST00000477306 C8orf37Q96NL8 207 aa21.87■■□□□ 1.09
HDGF-207ENST00000477306 C1orf167Q5SNV9 1468 aa21.87■■□□□ 1.09
HDGF-207ENST00000477306 CDK12Q9NYV4 1490 aaPredicted RBP21.86■■□□□ 1.09
HDGF-207ENST00000477306 PTCH1Q13635 1447 aa21.86■■□□□ 1.09
HDGF-207ENST00000477306 ROBO2Q9HCK4 1378 aa21.86■■□□□ 1.09
HDGF-207ENST00000477306 ORAI2Q96SN7 254 aa21.82■■□□□ 1.08
HDGF-207ENST00000477306 SLC4A1APQ9BWU0 796 aaKnown RBP21.82■■□□□ 1.08
HDGF-207ENST00000477306 ADAMTS2O95450 1211 aa21.81■■□□□ 1.08
HDGF-207ENST00000477306 QTRT2Q9H974 415 aaKnown RBP21.81■■□□□ 1.08
HDGF-207ENST00000477306 RPGRIP1LQ68CZ1 1315 aa21.8■■□□□ 1.08
HDGF-207ENST00000477306 LAMC1P11047 1609 aa21.8■■□□□ 1.08
HDGF-207ENST00000477306 RGS12O14924 1447 aa21.8■■□□□ 1.08
HDGF-207ENST00000477306 PPLO60437 1756 aa21.79■■□□□ 1.08
HDGF-207ENST00000477306 RBM6P78332 1123 aaKnown RBP21.78■■□□□ 1.08
HDGF-207ENST00000477306 NGLY1Q96IV0 654 aa21.78■■□□□ 1.08
HDGF-207ENST00000477306 PRAG1Q86YV5 1406 aa21.78■■□□□ 1.08
HDGF-207ENST00000477306 SOS2Q07890 1332 aaPredicted RBP21.78■■□□□ 1.08
HDGF-207ENST00000477306 FOXD1Q16676 465 aa21.75■■□□□ 1.07
HDGF-207ENST00000477306 USP21Q9UK80 565 aa21.71■■□□□ 1.07
HDGF-207ENST00000477306 CDC42BPGQ6DT37 1551 aa21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 168.6 ms