RNA–Protein interactions for RNA: ENST00000477069.5

NUP188-205, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 2,941 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-205ENST00000477069 PIK3C2BO00750 1634 aa15.72■□□□□ 0.11
NUP188-205ENST00000477069 RALBP1Q15311 655 aa15.71■□□□□ 0.1
NUP188-205ENST00000477069 MYO3AQ8NEV4 1616 aa15.71■□□□□ 0.1
NUP188-205ENST00000477069 BRD4O60885 1362 aaPredicted RBP15.7■□□□□ 0.1
NUP188-205ENST00000477069 MYBBP1AQ9BQG0 1328 aaKnown RBP15.7■□□□□ 0.1
NUP188-205ENST00000477069 SYNMO15061 1565 aa15.7■□□□□ 0.1
NUP188-205ENST00000477069 LRPPRCP42704 1394 aaKnown RBP15.7■□□□□ 0.1
NUP188-205ENST00000477069 DIP2BQ9P265 1576 aa15.69■□□□□ 0.1
NUP188-205ENST00000477069 PNISRQ8TF01 805 aaKnown RBP15.69■□□□□ 0.1
NUP188-205ENST00000477069 TMF1P82094 1093 aa15.68■□□□□ 0.1
NUP188-205ENST00000477069 ZMYM4Q5VZL5 1548 aa15.68■□□□□ 0.1
NUP188-205ENST00000477069 SETBP1Q9Y6X0 1596 aa15.68■□□□□ 0.1
NUP188-205ENST00000477069 WASHC2CQ9Y4E1 1318 aa15.67■□□□□ 0.1
NUP188-205ENST00000477069 NEFLP07196 543 aa15.67■□□□□ 0.1
NUP188-205ENST00000477069 KDM5AP29375 1690 aaKnown RBP15.66■□□□□ 0.1
NUP188-205ENST00000477069 NOS1P29475 1434 aa15.66■□□□□ 0.1
NUP188-205ENST00000477069 CFAP65Q6ZU64 1925 aaKnown RBP15.66■□□□□ 0.1
NUP188-205ENST00000477069 RAPGEF3O95398 923 aa15.66■□□□□ 0.1
NUP188-205ENST00000477069 ADGRF5Q8IZF2 1346 aa15.65■□□□□ 0.1
NUP188-205ENST00000477069 CNGB1Q14028 1251 aaPredicted RBP15.64■□□□□ 0.09
NUP188-205ENST00000477069 YEATS2Q9ULM3 1422 aa15.64■□□□□ 0.09
NUP188-205ENST00000477069 EIF3AQ14152 1382 aaKnown RBP15.63■□□□□ 0.09
NUP188-205ENST00000477069 ARHGAP31Q2M1Z3 1444 aa15.63■□□□□ 0.09
NUP188-205ENST00000477069 PIK3C2GO75747 1445 aa15.63■□□□□ 0.09
NUP188-205ENST00000477069 SMG6Q86US8 1419 aaKnown RBP15.62■□□□□ 0.09
NUP188-205ENST00000477069 TMC1Q8TDI8 760 aa15.62■□□□□ 0.09
NUP188-205ENST00000477069 BCANQ96GW7 911 aa15.62■□□□□ 0.09
NUP188-205ENST00000477069 PANK3Q9H999 370 aa15.62■□□□□ 0.09
NUP188-205ENST00000477069 ADGRB1O14514 1584 aa15.61■□□□□ 0.09
NUP188-205ENST00000477069 GGT6Q6P531 493 aa15.61■□□□□ 0.09
NUP188-205ENST00000477069 CYB5RLQ6IPT4 315 aa15.61■□□□□ 0.09
NUP188-205ENST00000477069 ERVK-7P63135 1459 aa15.61■□□□□ 0.09
NUP188-205ENST00000477069 NLRP13Q86W25 1043 aa15.61■□□□□ 0.09
NUP188-205ENST00000477069 CFAP70Q5T0N1 1121 aa15.6■□□□□ 0.09
NUP188-205ENST00000477069 REREQ9P2R6 1566 aa15.6■□□□□ 0.09
NUP188-205ENST00000477069 PREX1Q8TCU6 1659 aa15.6■□□□□ 0.09
NUP188-205ENST00000477069 NEXMIFQ5QGS0 1516 aa15.6■□□□□ 0.09
NUP188-205ENST00000477069 SBNO2Q9Y2G9 1366 aa15.58■□□□□ 0.08
NUP188-205ENST00000477069 TSPOAP1O95153 1857 aa15.58■□□□□ 0.08
NUP188-205ENST00000477069 QRICH2Q9H0J4 1663 aa15.57■□□□□ 0.08
NUP188-205ENST00000477069 INSRP06213 1382 aa15.57■□□□□ 0.08
NUP188-205ENST00000477069 CDCA8Q53HL2 280 aa15.57■□□□□ 0.08
NUP188-205ENST00000477069 MYO5BQ9ULV0 1848 aa15.56■□□□□ 0.08
NUP188-205ENST00000477069 RPGRIP1LQ68CZ1 1315 aa15.56■□□□□ 0.08
NUP188-205ENST00000477069 ASXL1Q8IXJ9 1541 aa15.56■□□□□ 0.08
NUP188-205ENST00000477069 ERICH6BQ5W0A0 696 aa15.55■□□□□ 0.08
NUP188-205ENST00000477069 TMEM131LA2VDJ0 1609 aa15.54■□□□□ 0.08
NUP188-205ENST00000477069 BLMP54132 1417 aaPredicted RBP15.54■□□□□ 0.08
NUP188-205ENST00000477069 KIF13AQ9H1H9 1805 aa15.54■□□□□ 0.08
NUP188-205ENST00000477069 CC2D1BQ5T0F9 858 aaKnown RBP15.54■□□□□ 0.08
NUP188-205ENST00000477069 ARHGEF28Q8N1W1 1705 aaKnown RBP15.54■□□□□ 0.08
NUP188-205ENST00000477069 NPC1L1Q9UHC9 1359 aa15.53■□□□□ 0.08
NUP188-205ENST00000477069 AMER1Q5JTC6 1135 aaPredicted RBP15.53■□□□□ 0.08
NUP188-205ENST00000477069 C14orf93Q9H972 538 aaKnown RBP15.53■□□□□ 0.08
NUP188-205ENST00000477069 NUDCQ9Y266 331 aa15.53■□□□□ 0.08
NUP188-205ENST00000477069 AGLP35573 1532 aa15.53■□□□□ 0.08
NUP188-205ENST00000477069 SLC24A1O60721 1099 aa15.52■□□□□ 0.07
NUP188-205ENST00000477069 TSHZ2Q9NRE2 1034 aa15.52■□□□□ 0.07
NUP188-205ENST00000477069 RNF123Q5XPI4 1314 aa15.52■□□□□ 0.07
NUP188-205ENST00000477069 FAM69CQ0P6D2 419 aa15.51■□□□□ 0.07
NUP188-205ENST00000477069 ZFYVE9O95405 1425 aa15.5■□□□□ 0.07
NUP188-205ENST00000477069 IRX6P78412 446 aaPredicted RBP15.5■□□□□ 0.07
NUP188-205ENST00000477069 CHGAP10645 457 aaKnown RBP15.49■□□□□ 0.07
NUP188-205ENST00000477069 KNSTRNQ9Y448 316 aa15.48■□□□□ 0.07
NUP188-205ENST00000477069 CLTCQ00610 1675 aaKnown RBP15.47■□□□□ 0.07
NUP188-205ENST00000477069 CENPJQ9HC77 1338 aaPredicted RBP15.47■□□□□ 0.07
NUP188-205ENST00000477069 USP32Q8NFA0 1604 aa15.47■□□□□ 0.07
NUP188-205ENST00000477069 PPP2R1AP30153 589 aa15.46■□□□□ 0.07
NUP188-205ENST00000477069 ARHGEF40Q8TER5 1519 aa15.46■□□□□ 0.07
NUP188-205ENST00000477069 IDI1Q13907 227 aa15.46■□□□□ 0.06
NUP188-205ENST00000477069 SLC52A1Q9NWF4 448 aa15.45■□□□□ 0.06
NUP188-205ENST00000477069 TULP4Q9NRJ4 1543 aa15.44■□□□□ 0.06
NUP188-205ENST00000477069 PPP4R2Q9NY27 417 aa15.44■□□□□ 0.06
NUP188-205ENST00000477069 SPATA31D1Q6ZQQ2 1576 aa15.43■□□□□ 0.06
NUP188-205ENST00000477069 SENP3-EIF4A1A0A087X0R7 540 aa15.43■□□□□ 0.06
NUP188-205ENST00000477069 VGFO15240 615 aaPredicted RBP15.43■□□□□ 0.06
NUP188-205ENST00000477069 CARD14Q9BXL6 1004 aa15.42■□□□□ 0.06
NUP188-205ENST00000477069 TRAK1Q9UPV9 953 aa15.42■□□□□ 0.06
NUP188-205ENST00000477069 TMEM132EQ6IEE7 984 aa15.41■□□□□ 0.06
NUP188-205ENST00000477069 PDE3BQ13370 1112 aa15.41■□□□□ 0.06
NUP188-205ENST00000477069 PPP6R1Q9UPN7 881 aa15.4■□□□□ 0.06
NUP188-205ENST00000477069 SETD1AO15047 1707 aaKnown RBP15.39■□□□□ 0.05
NUP188-205ENST00000477069 PTPRMP28827 1452 aa15.38■□□□□ 0.05
NUP188-205ENST00000477069 NUTM2DQ5VT03 806 aaPredicted RBP15.37■□□□□ 0.05
NUP188-205ENST00000477069 PUS7Q96PZ0 661 aaKnown RBP15.37■□□□□ 0.05
NUP188-205ENST00000477069 ADAMTS8Q9UP79 889 aa15.37■□□□□ 0.05
NUP188-205ENST00000477069 SHPRHQ149N8 1683 aa15.37■□□□□ 0.05
NUP188-205ENST00000477069 ALKQ9UM73 1620 aa15.37■□□□□ 0.05
NUP188-205ENST00000477069 FBXO31Q5XUX0 539 aaPredicted RBP15.37■□□□□ 0.05
NUP188-205ENST00000477069 NSD3Q9BZ95 1437 aa15.35■□□□□ 0.05
NUP188-205ENST00000477069 A2ML1A8K2U0 1454 aa15.35■□□□□ 0.05
NUP188-205ENST00000477069 CDCA7LQ96GN5 454 aa15.33■□□□□ 0.04
NUP188-205ENST00000477069 PLEKHH1Q9ULM0 1364 aa15.32■□□□□ 0.04
NUP188-205ENST00000477069 ZNF521Q96K83 1311 aa15.32■□□□□ 0.04
NUP188-205ENST00000477069 SALL2Q9Y467 1007 aaPredicted RBP15.32■□□□□ 0.04
NUP188-205ENST00000477069 YTHDC2Q9H6S0 1430 aaKnown RBP15.32■□□□□ 0.04
NUP188-205ENST00000477069 NRXN3Q9Y4C0 1643 aa15.32■□□□□ 0.04
NUP188-205ENST00000477069 SLC12A5Q9H2X9 1139 aa15.32■□□□□ 0.04
NUP188-205ENST00000477069 POLR3AO14802 1390 aaPredicted RBP15.32■□□□□ 0.04
NUP188-205ENST00000477069 EVC2Q86UK5 1308 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms