RNA–Protein interactions for RNA: ENST00000477052.1

VARS2-208, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 552 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-208ENST00000477052 UNC13BO14795 1591 aa17.91■□□□□ 0.46
VARS2-208ENST00000477052 GCC2Q8IWJ2 1684 aa17.91■□□□□ 0.46
VARS2-208ENST00000477052 KCNA6P17658 529 aa17.91■□□□□ 0.46
VARS2-208ENST00000477052 PROSER2Q86WR7 435 aaPredicted RBP17.91■□□□□ 0.46
VARS2-208ENST00000477052 RPRD2Q5VT52 1461 aaKnown RBP17.9■□□□□ 0.46
VARS2-208ENST00000477052 E9PCH4 1651 aa17.9■□□□□ 0.46
VARS2-208ENST00000477052 RIMS2Q9UQ26 1411 aa17.89■□□□□ 0.46
VARS2-208ENST00000477052 PPP1R15AO75807 674 aaPredicted RBP17.89■□□□□ 0.45
VARS2-208ENST00000477052 ROCK1Q13464 1354 aa17.89■□□□□ 0.45
VARS2-208ENST00000477052 ZFYVE9O95405 1425 aa17.89■□□□□ 0.45
VARS2-208ENST00000477052 TMEM131LA2VDJ0 1609 aa17.88■□□□□ 0.45
VARS2-208ENST00000477052 NUP155O75694 1391 aa17.88■□□□□ 0.45
VARS2-208ENST00000477052 PHF23Q9BUL5 403 aaPredicted RBP17.86■□□□□ 0.45
VARS2-208ENST00000477052 IQGAP3Q86VI3 1631 aa17.84■□□□□ 0.45
VARS2-208ENST00000477052 PLEKHG1Q9ULL1 1385 aa17.84■□□□□ 0.45
VARS2-208ENST00000477052 NWD1Q149M9 1564 aa17.82■□□□□ 0.44
VARS2-208ENST00000477052 NKTRP30414 1462 aaKnown RBP17.8■□□□□ 0.44
VARS2-208ENST00000477052 ROBO1Q9Y6N7 1651 aa17.8■□□□□ 0.44
VARS2-208ENST00000477052 FAM135BQ49AJ0 1406 aa17.8■□□□□ 0.44
VARS2-208ENST00000477052 HDGFP51858 240 aaKnown RBP17.79■□□□□ 0.44
VARS2-208ENST00000477052 CHD2O14647 1828 aaKnown RBP17.79■□□□□ 0.44
VARS2-208ENST00000477052 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.78■□□□□ 0.44
VARS2-208ENST00000477052 TBX22Q9Y458 520 aa17.78■□□□□ 0.44
VARS2-208ENST00000477052 ADAMTS13Q76LX8 1427 aa17.78■□□□□ 0.44
VARS2-208ENST00000477052 MSH6P52701 1360 aa17.78■□□□□ 0.44
VARS2-208ENST00000477052 C14orf37Q86TY3 774 aa17.76■□□□□ 0.43
VARS2-208ENST00000477052 SLAIN2Q9P270 581 aa17.76■□□□□ 0.43
VARS2-208ENST00000477052 RGS17Q9UGC6 210 aaPredicted RBP17.76■□□□□ 0.43
VARS2-208ENST00000477052 ZNF326Q5BKZ1 582 aaKnown RBP17.73■□□□□ 0.43
VARS2-208ENST00000477052 PTPRUQ92729 1446 aa17.72■□□□□ 0.43
VARS2-208ENST00000477052 SPHKAPQ2M3C7 1700 aa17.72■□□□□ 0.43
VARS2-208ENST00000477052 RRBP1Q9P2E9 1410 aaKnown RBP17.72■□□□□ 0.43
VARS2-208ENST00000477052 AMOTL2Q9Y2J4 779 aa17.71■□□□□ 0.43
VARS2-208ENST00000477052 NAIPQ13075 1403 aa17.71■□□□□ 0.43
VARS2-208ENST00000477052 PHLPP1O60346 1717 aa17.69■□□□□ 0.42
VARS2-208ENST00000477052 TRIM52Q96A61 297 aa17.68■□□□□ 0.42
VARS2-208ENST00000477052 CLTCL1P53675 1640 aa17.68■□□□□ 0.42
VARS2-208ENST00000477052 NRXN3Q9Y4C0 1643 aa17.68■□□□□ 0.42
VARS2-208ENST00000477052 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.67■□□□□ 0.42
VARS2-208ENST00000477052 DIP2AQ14689 1571 aa17.67■□□□□ 0.42
VARS2-208ENST00000477052 POTEAQ6S8J7 498 aa17.67■□□□□ 0.42
VARS2-208ENST00000477052 TRPM2O94759 1503 aa17.67■□□□□ 0.42
VARS2-208ENST00000477052 METP08581 1390 aa17.66■□□□□ 0.42
VARS2-208ENST00000477052 ATF3P18847 181 aa17.65■□□□□ 0.42
VARS2-208ENST00000477052 C19orf44Q9H6X5 657 aa17.65■□□□□ 0.42
VARS2-208ENST00000477052 PIK3R4Q99570 1358 aa17.65■□□□□ 0.42
VARS2-208ENST00000477052 CADPS2Q86UW7 1296 aa17.63■□□□□ 0.41
VARS2-208ENST00000477052 NCOA3Q9Y6Q9 1424 aa17.63■□□□□ 0.41
VARS2-208ENST00000477052 SETBP1Q9Y6X0 1596 aa17.62■□□□□ 0.41
VARS2-208ENST00000477052 FOXD1Q16676 465 aa17.62■□□□□ 0.41
VARS2-208ENST00000477052 NEXMIFQ5QGS0 1516 aa17.62■□□□□ 0.41
VARS2-208ENST00000477052 COL16A1Q07092 1604 aaPredicted RBP17.61■□□□□ 0.41
VARS2-208ENST00000477052 JCADQ9P266 1359 aa17.61■□□□□ 0.41
VARS2-208ENST00000477052 BRINP3Q76B58 766 aa17.6■□□□□ 0.41
VARS2-208ENST00000477052 XRN1Q8IZH2 1706 aaKnown RBP17.6■□□□□ 0.41
VARS2-208ENST00000477052 HFM1A2PYH4 1435 aa17.59■□□□□ 0.41
VARS2-208ENST00000477052 SLC4A1APQ9BWU0 796 aaKnown RBP17.59■□□□□ 0.41
VARS2-208ENST00000477052 DDX17Q92841 729 aaKnown RBP17.58■□□□□ 0.4
VARS2-208ENST00000477052 KIF1BO60333 1816 aa17.58■□□□□ 0.4
VARS2-208ENST00000477052 LRP6O75581 1613 aa17.58■□□□□ 0.4
VARS2-208ENST00000477052 NUTM2BA6NNL0 878 aaPredicted RBP17.55■□□□□ 0.4
VARS2-208ENST00000477052 NUTM2EB1AL46 878 aaPredicted RBP17.55■□□□□ 0.4
VARS2-208ENST00000477052 NUTM2AQ8IVF1 878 aaPredicted RBP17.55■□□□□ 0.4
VARS2-208ENST00000477052 AHDC1Q5TGY3 1603 aaPredicted RBP17.54■□□□□ 0.4
VARS2-208ENST00000477052 MEX3CQ5U5Q3 659 aaKnown RBP17.54■□□□□ 0.4
VARS2-208ENST00000477052 MST1RQ04912 1400 aa17.54■□□□□ 0.4
VARS2-208ENST00000477052 ASXL1Q8IXJ9 1541 aa17.52■□□□□ 0.4
VARS2-208ENST00000477052 NALCNQ8IZF0 1738 aa17.52■□□□□ 0.39
VARS2-208ENST00000477052 SETD1AO15047 1707 aaKnown RBP17.51■□□□□ 0.39
VARS2-208ENST00000477052 VGFO15240 615 aaPredicted RBP17.51■□□□□ 0.39
VARS2-208ENST00000477052 ADGRL3Q9HAR2 1447 aa17.51■□□□□ 0.39
VARS2-208ENST00000477052 ROBO2Q9HCK4 1378 aa17.51■□□□□ 0.39
VARS2-208ENST00000477052 SPATA31A6Q5VVP1 1343 aa17.5■□□□□ 0.39
VARS2-208ENST00000477052 DCCP43146 1447 aa17.5■□□□□ 0.39
VARS2-208ENST00000477052 RGL3Q3MIN7 710 aa17.49■□□□□ 0.39
VARS2-208ENST00000477052 SHPRHQ149N8 1683 aa17.48■□□□□ 0.39
VARS2-208ENST00000477052 PPLO60437 1756 aa17.47■□□□□ 0.39
VARS2-208ENST00000477052 ADGRF5Q8IZF2 1346 aa17.47■□□□□ 0.39
VARS2-208ENST00000477052 ORAI2Q96SN7 254 aa17.46■□□□□ 0.39
VARS2-208ENST00000477052 MPHOSPH9Q99550 1183 aa17.46■□□□□ 0.39
VARS2-208ENST00000477052 RPGRIP1LQ68CZ1 1315 aa17.46■□□□□ 0.38
VARS2-208ENST00000477052 NHSL1Q5SYE7 1610 aa17.45■□□□□ 0.38
VARS2-208ENST00000477052 C1orf167Q5SNV9 1468 aa17.44■□□□□ 0.38
VARS2-208ENST00000477052 STK26Q9P289 416 aa17.44■□□□□ 0.38
VARS2-208ENST00000477052 PTCH1Q13635 1447 aa17.43■□□□□ 0.38
VARS2-208ENST00000477052 SETD5Q9C0A6 1442 aa17.43■□□□□ 0.38
VARS2-208ENST00000477052 CCDC144AA2RUR9 1427 aa17.42■□□□□ 0.38
VARS2-208ENST00000477052 ZNF772Q68DY9 489 aaPredicted RBP17.42■□□□□ 0.38
VARS2-208ENST00000477052 LRRC59Q96AG4 307 aaKnown RBP17.42■□□□□ 0.38
VARS2-208ENST00000477052 TMEM132EQ6IEE7 984 aa17.41■□□□□ 0.38
VARS2-208ENST00000477052 AFF2P51816 1311 aa17.41■□□□□ 0.38
VARS2-208ENST00000477052 PNPLA6Q8IY17 1366 aa17.4■□□□□ 0.38
VARS2-208ENST00000477052 SPATA31E1Q6ZUB1 1445 aa17.4■□□□□ 0.38
VARS2-208ENST00000477052 NUTM2FA1L443 756 aa17.4■□□□□ 0.38
VARS2-208ENST00000477052 WAPLQ7Z5K2 1190 aa17.4■□□□□ 0.38
VARS2-208ENST00000477052 C8orf37Q96NL8 207 aa17.4■□□□□ 0.38
VARS2-208ENST00000477052 ADAMTS2O95450 1211 aa17.39■□□□□ 0.37
VARS2-208ENST00000477052 RXRBP28702 533 aa17.37■□□□□ 0.37
VARS2-208ENST00000477052 XPCQ01831 940 aaPredicted RBP17.37■□□□□ 0.37
VARS2-208ENST00000477052 PLEKHH1Q9ULM0 1364 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms