RNA–Protein interactions for RNA: ENST00000476994.1

SREBF1-211, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-211ENST00000476994 LTKP29376 864 aa26.06■■□□□ 1.76
SREBF1-211ENST00000476994 TMEM2Q9UHN6 1383 aa26.06■■□□□ 1.76
SREBF1-211ENST00000476994 SOCS7O14512 581 aa26.05■■□□□ 1.76
SREBF1-211ENST00000476994 SPHKAPQ2M3C7 1700 aa26.03■■□□□ 1.76
SREBF1-211ENST00000476994 SLC4A1APQ9BWU0 796 aaKnown RBP26.03■■□□□ 1.76
SREBF1-211ENST00000476994 IDI1Q13907 227 aa26.02■■□□□ 1.76
SREBF1-211ENST00000476994 RPRD2Q5VT52 1461 aaKnown RBP26.02■■□□□ 1.76
SREBF1-211ENST00000476994 SLC52A1Q9NWF4 448 aa26.01■■□□□ 1.75
SREBF1-211ENST00000476994 ADGRB3O60242 1522 aa25.99■■□□□ 1.75
SREBF1-211ENST00000476994 NOS1P29475 1434 aa25.99■■□□□ 1.75
SREBF1-211ENST00000476994 ALKQ9UM73 1620 aa25.96■■□□□ 1.75
SREBF1-211ENST00000476994 XIRP1Q702N8 1843 aaKnown RBP25.95■■□□□ 1.74
SREBF1-211ENST00000476994 MED1Q15648 1581 aaPredicted RBP25.95■■□□□ 1.74
SREBF1-211ENST00000476994 FOXD1Q16676 465 aa25.94■■□□□ 1.74
SREBF1-211ENST00000476994 BCANQ96GW7 911 aa25.94■■□□□ 1.74
SREBF1-211ENST00000476994 ANKRD30BQ9BXX2 1392 aa25.94■■□□□ 1.74
SREBF1-211ENST00000476994 TRPM2O94759 1503 aa25.93■■□□□ 1.74
SREBF1-211ENST00000476994 MYO5BQ9ULV0 1848 aa25.93■■□□□ 1.74
SREBF1-211ENST00000476994 HDGFP51858 240 aaKnown RBP25.92■■□□□ 1.74
SREBF1-211ENST00000476994 SENP3Q9H4L4 574 aaPredicted RBP25.89■■□□□ 1.74
SREBF1-211ENST00000476994 CLTCL1P53675 1640 aa25.88■■□□□ 1.73
SREBF1-211ENST00000476994 SLC26A8Q96RN1 970 aa25.88■■□□□ 1.73
SREBF1-211ENST00000476994 PHF23Q9BUL5 403 aaPredicted RBP25.88■■□□□ 1.73
SREBF1-211ENST00000476994 PPP1R15AO75807 674 aaPredicted RBP25.87■■□□□ 1.73
SREBF1-211ENST00000476994 KCNA6P17658 529 aa25.87■■□□□ 1.73
SREBF1-211ENST00000476994 PROSER2Q86WR7 435 aaPredicted RBP25.85■■□□□ 1.73
SREBF1-211ENST00000476994 CLSPNQ9HAW4 1339 aa25.84■■□□□ 1.73
SREBF1-211ENST00000476994 TMEM131LA2VDJ0 1609 aa25.83■■□□□ 1.73
SREBF1-211ENST00000476994 NKTRP30414 1462 aaKnown RBP25.83■■□□□ 1.73
SREBF1-211ENST00000476994 TMEM94Q12767 1356 aa25.82■■□□□ 1.72
SREBF1-211ENST00000476994 CHGAP10645 457 aaKnown RBP25.82■■□□□ 1.72
SREBF1-211ENST00000476994 CCER1Q8TC90 406 aaPredicted RBP25.81■■□□□ 1.72
SREBF1-211ENST00000476994 KIF1BO60333 1816 aa25.81■■□□□ 1.72
SREBF1-211ENST00000476994 RIMS2Q9UQ26 1411 aa25.8■■□□□ 1.72
SREBF1-211ENST00000476994 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.8■■□□□ 1.72
SREBF1-211ENST00000476994 NWD1Q149M9 1564 aa25.8■■□□□ 1.72
SREBF1-211ENST00000476994 CHD2O14647 1828 aaKnown RBP25.79■■□□□ 1.72
SREBF1-211ENST00000476994 PLEKHG1Q9ULL1 1385 aa25.79■■□□□ 1.72
SREBF1-211ENST00000476994 ZFYVE9O95405 1425 aa25.78■■□□□ 1.72
SREBF1-211ENST00000476994 MSH6P52701 1360 aa25.76■■□□□ 1.71
SREBF1-211ENST00000476994 FAM135BQ49AJ0 1406 aa25.76■■□□□ 1.71
SREBF1-211ENST00000476994 CCDC144AA2RUR9 1427 aa25.75■■□□□ 1.71
SREBF1-211ENST00000476994 SIN3AQ96ST3 1273 aa25.73■■□□□ 1.71
SREBF1-211ENST00000476994 ROBO1Q9Y6N7 1651 aa25.73■■□□□ 1.71
SREBF1-211ENST00000476994 DIP2AQ14689 1571 aa25.7■■□□□ 1.71
SREBF1-211ENST00000476994 RBM33Q96EV2 1170 aaKnown RBP25.7■■□□□ 1.7
SREBF1-211ENST00000476994 TBX22Q9Y458 520 aa25.7■■□□□ 1.7
SREBF1-211ENST00000476994 SPATA31E1Q6ZUB1 1445 aa25.7■■□□□ 1.7
SREBF1-211ENST00000476994 IFT172Q9UG01 1749 aa25.68■■□□□ 1.7
SREBF1-211ENST00000476994 C14orf37Q86TY3 774 aa25.67■■□□□ 1.7
SREBF1-211ENST00000476994 NUTM2DQ5VT03 806 aaPredicted RBP25.65■■□□□ 1.7
SREBF1-211ENST00000476994 PIK3R4Q99570 1358 aa25.64■■□□□ 1.69
SREBF1-211ENST00000476994 SLAIN2Q9P270 581 aa25.63■■□□□ 1.69
SREBF1-211ENST00000476994 PPLO60437 1756 aa25.63■■□□□ 1.69
SREBF1-211ENST00000476994 NCOA3Q9Y6Q9 1424 aa25.63■■□□□ 1.69
SREBF1-211ENST00000476994 PHLPP1O60346 1717 aa25.62■■□□□ 1.69
SREBF1-211ENST00000476994 NEUROD1Q13562 356 aa25.59■■□□□ 1.69
SREBF1-211ENST00000476994 ZNF326Q5BKZ1 582 aaKnown RBP25.59■■□□□ 1.69
SREBF1-211ENST00000476994 ADAMTS13Q76LX8 1427 aa25.59■■□□□ 1.69
SREBF1-211ENST00000476994 NEXMIFQ5QGS0 1516 aa25.57■■□□□ 1.68
SREBF1-211ENST00000476994 ATF3P18847 181 aa25.56■■□□□ 1.68
SREBF1-211ENST00000476994 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.55■■□□□ 1.68
SREBF1-211ENST00000476994 CADPS2Q86UW7 1296 aa25.55■■□□□ 1.68
SREBF1-211ENST00000476994 C19orf44Q9H6X5 657 aa25.54■■□□□ 1.68
SREBF1-211ENST00000476994 AMOTL2Q9Y2J4 779 aa25.52■■□□□ 1.68
SREBF1-211ENST00000476994 SETBP1Q9Y6X0 1596 aa25.51■■□□□ 1.67
SREBF1-211ENST00000476994 JCADQ9P266 1359 aa25.5■■□□□ 1.67
SREBF1-211ENST00000476994 TONSLQ96HA7 1378 aa25.49■■□□□ 1.67
SREBF1-211ENST00000476994 L3MBTL2Q969R5 705 aa25.49■■□□□ 1.67
SREBF1-211ENST00000476994 TIMELESSQ9UNS1 1208 aa25.49■■□□□ 1.67
SREBF1-211ENST00000476994 NRXN3Q9Y4C0 1643 aa25.48■■□□□ 1.67
SREBF1-211ENST00000476994 MYOM2P54296 1465 aa25.47■■□□□ 1.67
SREBF1-211ENST00000476994 RGL3Q3MIN7 710 aa25.47■■□□□ 1.67
SREBF1-211ENST00000476994 XRN1Q8IZH2 1706 aaKnown RBP25.46■■□□□ 1.67
SREBF1-211ENST00000476994 COL16A1Q07092 1604 aaPredicted RBP25.45■■□□□ 1.67
SREBF1-211ENST00000476994 RGS17Q9UGC6 210 aaPredicted RBP25.45■■□□□ 1.66
SREBF1-211ENST00000476994 NRXN1Q9ULB1 1477 aa25.45■■□□□ 1.66
SREBF1-211ENST00000476994 RPGRIP1LQ68CZ1 1315 aa25.44■■□□□ 1.66
SREBF1-211ENST00000476994 DCCP43146 1447 aa25.43■■□□□ 1.66
SREBF1-211ENST00000476994 PTPRUQ92729 1446 aa25.43■■□□□ 1.66
SREBF1-211ENST00000476994 AHDC1Q5TGY3 1603 aaPredicted RBP25.41■■□□□ 1.66
SREBF1-211ENST00000476994 SPATA31A6Q5VVP1 1343 aa25.39■■□□□ 1.66
SREBF1-211ENST00000476994 PRAG1Q86YV5 1406 aa25.38■■□□□ 1.65
SREBF1-211ENST00000476994 SETD1AO15047 1707 aaKnown RBP25.38■■□□□ 1.65
SREBF1-211ENST00000476994 DCAF11Q8TEB1 546 aa25.38■■□□□ 1.65
SREBF1-211ENST00000476994 SHPRHQ149N8 1683 aa25.38■■□□□ 1.65
SREBF1-211ENST00000476994 KIAA1210Q9ULL0 1709 aa25.37■■□□□ 1.65
SREBF1-211ENST00000476994 VGFO15240 615 aaPredicted RBP25.37■■□□□ 1.65
SREBF1-211ENST00000476994 MEX3CQ5U5Q3 659 aaKnown RBP25.37■■□□□ 1.65
SREBF1-211ENST00000476994 TRPM1Q7Z4N2 1603 aa25.37■■□□□ 1.65
SREBF1-211ENST00000476994 METP08581 1390 aa25.36■■□□□ 1.65
SREBF1-211ENST00000476994 STAC3Q96MF2 364 aa25.35■■□□□ 1.65
SREBF1-211ENST00000476994 PIK3C2GO75747 1445 aa25.35■■□□□ 1.65
SREBF1-211ENST00000476994 ADGRF5Q8IZF2 1346 aa25.35■■□□□ 1.65
SREBF1-211ENST00000476994 POTEAQ6S8J7 498 aa25.34■■□□□ 1.65
SREBF1-211ENST00000476994 BRINP3Q76B58 766 aa25.33■■□□□ 1.65
SREBF1-211ENST00000476994 ZEB1P37275 1124 aaPredicted RBP25.32■■□□□ 1.64
SREBF1-211ENST00000476994 NBPF8Q3BBV2 869 aa25.32■■□□□ 1.64
SREBF1-211ENST00000476994 LAMC1P11047 1609 aa25.32■■□□□ 1.64
SREBF1-211ENST00000476994 ADGRL3Q9HAR2 1447 aa25.31■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 6.8 ms