RNA–Protein interactions for RNA: ENST00000476806.5

RBM39-230, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 754 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-230ENST00000476806 ANKRD50Q9ULJ7 1429 aa11.3□□□□□ -0.6
RBM39-230ENST00000476806 KRTAP3-3Q9BYR6 98 aa11.3□□□□□ -0.6
RBM39-230ENST00000476806 KRTAP3-2Q9BYR7 98 aa11.3□□□□□ -0.6
RBM39-230ENST00000476806 EMP3P54852 163 aa11.29□□□□□ -0.6
RBM39-230ENST00000476806 NEO1Q92859 1461 aa11.29□□□□□ -0.6
RBM39-230ENST00000476806 DUOX2Q9NRD8 1548 aa11.29□□□□□ -0.6
RBM39-230ENST00000476806 GLI2P10070 1586 aa11.28□□□□□ -0.6
RBM39-230ENST00000476806 ZNF518AQ6AHZ1 1483 aa11.28□□□□□ -0.6
RBM39-230ENST00000476806 POTEB3A0JP26 581 aa11.28□□□□□ -0.6
RBM39-230ENST00000476806 SOCS7O14512 581 aa11.28□□□□□ -0.6
RBM39-230ENST00000476806 POTEBQ6S5H4 581 aa11.28□□□□□ -0.6
RBM39-230ENST00000476806 KDM5DQ9BY66 1539 aa11.28□□□□□ -0.6
RBM39-230ENST00000476806 KIF15Q9NS87 1388 aa11.28□□□□□ -0.6
RBM39-230ENST00000476806 KCNH8Q96L42 1107 aa11.27□□□□□ -0.61
RBM39-230ENST00000476806 PDCD7Q8N8D1 485 aaKnown RBP11.26□□□□□ -0.61
RBM39-230ENST00000476806 CD109Q6YHK3 1445 aa11.26□□□□□ -0.61
RBM39-230ENST00000476806 TEX14Q8IWB6 1497 aa11.25□□□□□ -0.61
RBM39-230ENST00000476806 PYGBP11216 843 aa11.25□□□□□ -0.61
RBM39-230ENST00000476806 HS3ST6Q96QI5 342 aa11.25□□□□□ -0.61
RBM39-230ENST00000476806 RRP7BPQ9NSQ0 103 aa11.25□□□□□ -0.61
RBM39-230ENST00000476806 CHIC2Q9UKJ5 165 aa11.25□□□□□ -0.61
RBM39-230ENST00000476806 PCDHB8Q9UN66 801 aa11.25□□□□□ -0.61
RBM39-230ENST00000476806 TRIM52Q96A61 297 aa11.24□□□□□ -0.61
RBM39-230ENST00000476806 ZNF644Q9H582 1327 aaPredicted RBP11.24□□□□□ -0.61
RBM39-230ENST00000476806 EIF2AK4Q9P2K8 1649 aaKnown RBP11.24□□□□□ -0.61
RBM39-230ENST00000476806 TONSLQ96HA7 1378 aa11.23□□□□□ -0.61
RBM39-230ENST00000476806 SPAG9O60271 1321 aaKnown RBP11.22□□□□□ -0.61
RBM39-230ENST00000476806 C3orf67Q6ZVT6 689 aa11.22□□□□□ -0.61
RBM39-230ENST00000476806 UNC13BO14795 1591 aa11.21□□□□□ -0.61
RBM39-230ENST00000476806 ATP7AQ04656 1500 aa11.21□□□□□ -0.61
RBM39-230ENST00000476806 FAM205CA6NFA0 338 aa11.21□□□□□ -0.61
RBM39-230ENST00000476806 MAP3K4Q9Y6R4 1608 aa11.2□□□□□ -0.62
RBM39-230ENST00000476806 INO80Q9ULG1 1556 aaPredicted RBP11.2□□□□□ -0.62
RBM39-230ENST00000476806 ZFYVE16Q7Z3T8 1539 aa11.2□□□□□ -0.62
RBM39-230ENST00000476806 HNRNPMP52272 730 aaKnown RBP eCLIP11.2□□□□□ -0.62
RBM39-230ENST00000476806 DCAF8Q5TAQ9 597 aa11.2□□□□□ -0.62
RBM39-230ENST00000476806 KANK1Q14678 1352 aa11.19□□□□□ -0.62
RBM39-230ENST00000476806 MPHOSPH9Q99550 1183 aa11.19□□□□□ -0.62
RBM39-230ENST00000476806 KDM5CP41229 1560 aa11.19□□□□□ -0.62
RBM39-230ENST00000476806 POGZQ7Z3K3 1410 aa11.18□□□□□ -0.62
RBM39-230ENST00000476806 SCAPERQ9BY12 1400 aa11.18□□□□□ -0.62
RBM39-230ENST00000476806 L3MBTL3Q96JM7 780 aaPredicted RBP11.18□□□□□ -0.62
RBM39-230ENST00000476806 MAGI2Q86UL8 1455 aa11.18□□□□□ -0.62
RBM39-230ENST00000476806 MLH3Q9UHC1 1453 aa11.18□□□□□ -0.62
RBM39-230ENST00000476806 DISP3Q9P2K9 1392 aa11.17□□□□□ -0.62
RBM39-230ENST00000476806 DENND4BO75064 1496 aaPredicted RBP11.17□□□□□ -0.62
RBM39-230ENST00000476806 IQGAP3Q86VI3 1631 aa11.17□□□□□ -0.62
RBM39-230ENST00000476806 NUP155O75694 1391 aa11.16□□□□□ -0.62
RBM39-230ENST00000476806 FAM135AQ9P2D6 1515 aa11.15□□□□□ -0.62
RBM39-230ENST00000476806 RPRD2Q5VT52 1461 aaKnown RBP11.15□□□□□ -0.62
RBM39-230ENST00000476806 TRAPPC8Q9Y2L5 1435 aa11.15□□□□□ -0.62
RBM39-230ENST00000476806 BCORL1Q5H9F3 1711 aa11.14□□□□□ -0.63
RBM39-230ENST00000476806 ARHGEF12Q9NZN5 1544 aa11.14□□□□□ -0.63
RBM39-230ENST00000476806 DEPDC5O75140 1603 aa11.13□□□□□ -0.63
RBM39-230ENST00000476806 PZPP20742 1482 aa11.13□□□□□ -0.63
RBM39-230ENST00000476806 STAC3Q96MF2 364 aa11.13□□□□□ -0.63
RBM39-230ENST00000476806 FBXO3Q9UK99 471 aa11.13□□□□□ -0.63
RBM39-230ENST00000476806 DHX29Q7Z478 1369 aaKnown RBP11.13□□□□□ -0.63
RBM39-230ENST00000476806 ANKRD30BQ9BXX2 1392 aa11.13□□□□□ -0.63
RBM39-230ENST00000476806 ZNF316A6NFI3 1004 aaPredicted RBP11.12□□□□□ -0.63
RBM39-230ENST00000476806 MKRN3Q13064 507 aaKnown RBP11.12□□□□□ -0.63
RBM39-230ENST00000476806 CERKQ8TCT0 537 aa11.12□□□□□ -0.63
RBM39-230ENST00000476806 MYT1LQ9UL68 1186 aa11.12□□□□□ -0.63
RBM39-230ENST00000476806 PRDM15P57071 1507 aaPredicted RBP11.12□□□□□ -0.63
RBM39-230ENST00000476806 ZMYM4Q5VZL5 1548 aa11.12□□□□□ -0.63
RBM39-230ENST00000476806 ATP10AO60312 1499 aa11.12□□□□□ -0.63
RBM39-230ENST00000476806 PTPRMP28827 1452 aa11.12□□□□□ -0.63
RBM39-230ENST00000476806 A2MP01023 1474 aa11.1□□□□□ -0.63
RBM39-230ENST00000476806 CCDC144AA2RUR9 1427 aa11.09□□□□□ -0.63
RBM39-230ENST00000476806 RNF17Q9BXT8 1623 aaKnown RBP11.09□□□□□ -0.63
RBM39-230ENST00000476806 TET3O43151 1660 aa11.09□□□□□ -0.63
RBM39-230ENST00000476806 REREQ9P2R6 1566 aa11.09□□□□□ -0.63
RBM39-230ENST00000476806 HSPA2P54652 639 aa11.09□□□□□ -0.63
RBM39-230ENST00000476806 GOLGA2Q08379 1002 aa11.09□□□□□ -0.63
RBM39-230ENST00000476806 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.09□□□□□ -0.633e-38■■■□□ 17.2
RBM39-230ENST00000476806 KIDINS220Q9ULH0 1771 aa11.08□□□□□ -0.64
RBM39-230ENST00000476806 ZC3H13Q5T200 1668 aaKnown RBP11.08□□□□□ -0.64
RBM39-230ENST00000476806 NEURL4Q96JN8 1562 aa11.08□□□□□ -0.64
RBM39-230ENST00000476806 NEUROD1Q13562 356 aa11.08□□□□□ -0.64
RBM39-230ENST00000476806 PKD2Q13563 968 aa11.08□□□□□ -0.64
RBM39-230ENST00000476806 RICTORQ6R327 1708 aa11.08□□□□□ -0.64
RBM39-230ENST00000476806 LMTK2Q8IWU2 1503 aa11.08□□□□□ -0.64
RBM39-230ENST00000476806 PPP1R15AO75807 674 aaPredicted RBP11.07□□□□□ -0.64
RBM39-230ENST00000476806 ZNF467Q7Z7K2 595 aaPredicted RBP11.07□□□□□ -0.64
RBM39-230ENST00000476806 AFAP1Q8N556 730 aa11.06□□□□□ -0.64
RBM39-230ENST00000476806 VWDEQ8N2E2 1590 aa11.06□□□□□ -0.64
RBM39-230ENST00000476806 HOXB3P14651 431 aaPredicted RBP11.05□□□□□ -0.64
RBM39-230ENST00000476806 ADAMTSL3P82987 1691 aa11.04□□□□□ -0.64
RBM39-230ENST00000476806 TRPM2O94759 1503 aa11.03□□□□□ -0.64
RBM39-230ENST00000476806 SIN3AQ96ST3 1273 aa11.02□□□□□ -0.65
RBM39-230ENST00000476806 AGLP35573 1532 aa11.02□□□□□ -0.65
RBM39-230ENST00000476806 EFCAB6Q5THR3 1501 aa11.02□□□□□ -0.65
RBM39-230ENST00000476806 DIP2CQ9Y2E4 1556 aa11.02□□□□□ -0.65
RBM39-230ENST00000476806 KIF3BO15066 747 aa11.01□□□□□ -0.65
RBM39-230ENST00000476806 DPY19L2Q6NUT2 758 aa11.01□□□□□ -0.65
RBM39-230ENST00000476806 ABCA6Q8N139 1617 aa11.01□□□□□ -0.65
RBM39-230ENST00000476806 SPHKAPQ2M3C7 1700 aa11.01□□□□□ -0.65
RBM39-230ENST00000476806 UHRF1BP1Q6BDS2 1440 aa11.01□□□□□ -0.65
RBM39-230ENST00000476806 HOXB1P14653 301 aaPredicted RBP11□□□□□ -0.65
RBM39-230ENST00000476806 PSEN1P49768 467 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms