RNA–Protein interactions for RNA: ENST00000476784.5

TTC3-215, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 2

Gene TTC3, Length 7,425 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-215ENST00000476784 NEUROD6Q96NK8 337 aa8.23□□□□□ -1.09
TTC3-215ENST00000476784 MINK1Q8N4C8 1332 aaPredicted RBP8.23□□□□□ -1.09
TTC3-215ENST00000476784 LMOD3Q0VAK6 560 aa8.23□□□□□ -1.09
TTC3-215ENST00000476784 FOXD4L6Q3SYB3 417 aaPredicted RBP8.23□□□□□ -1.09
TTC3-215ENST00000476784 CPLX2Q6PUV4 134 aaKnown RBP8.23□□□□□ -1.09
TTC3-215ENST00000476784 FOXD4L3Q6VB84 417 aaPredicted RBP8.23□□□□□ -1.09
TTC3-215ENST00000476784 VTI1AQ96AJ9 217 aa8.23□□□□□ -1.09
TTC3-215ENST00000476784 KIF6Q6ZMV9 814 aa8.22□□□□□ -1.09
TTC3-215ENST00000476784 STK11IPQ8N1F8 1099 aa8.22□□□□□ -1.09
TTC3-215ENST00000476784 SUPT16HQ9Y5B9 1047 aaKnown RBP8.22□□□□□ -1.09
TTC3-215ENST00000476784 CCDC146Q8IYE0 955 aa8.22□□□□□ -1.09
TTC3-215ENST00000476784 PODXL2Q9NZ53 605 aa8.22□□□□□ -1.09
TTC3-215ENST00000476784 PKD2Q13563 968 aa8.22□□□□□ -1.09
TTC3-215ENST00000476784 RIC3Q7Z5B4 369 aa8.22□□□□□ -1.09
TTC3-215ENST00000476784 CPLX1O14810 134 aa8.21□□□□□ -1.09
TTC3-215ENST00000476784 CLUAP1Q96AJ1 413 aa8.21□□□□□ -1.09
TTC3-215ENST00000476784 ADAMTS2O95450 1211 aa8.21□□□□□ -1.09
TTC3-215ENST00000476784 DDX58O95786 925 aaKnown RBP8.21□□□□□ -1.09
TTC3-215ENST00000476784 TPM1P09493 284 aa8.21□□□□□ -1.09
TTC3-215ENST00000476784 ZNF428Q96B54 188 aa8.21□□□□□ -1.09
TTC3-215ENST00000476784 WASHC4Q2M389 1173 aa8.21□□□□□ -1.1
TTC3-215ENST00000476784 WWC3Q9ULE0 1092 aa8.21□□□□□ -1.1
TTC3-215ENST00000476784 TOM1L2Q6ZVM7 507 aa8.21□□□□□ -1.1
TTC3-215ENST00000476784 RRP7AQ9Y3A4 280 aaKnown RBP8.2□□□□□ -1.1
TTC3-215ENST00000476784 ROCK2O75116 1388 aaKnown RBP8.2□□□□□ -1.1
TTC3-215ENST00000476784 DRC1Q96MC2 740 aa8.2□□□□□ -1.1
TTC3-215ENST00000476784 MFAP1P55081 439 aaKnown RBP8.2□□□□□ -1.1
TTC3-215ENST00000476784 RSPH4AQ5TD94 716 aa8.19□□□□□ -1.1
TTC3-215ENST00000476784 RTN4Q9NQC3 1192 aaKnown RBP8.19□□□□□ -1.1
TTC3-215ENST00000476784 CHMP4CQ96CF2 233 aa8.19□□□□□ -1.1
TTC3-215ENST00000476784 BIN2Q9UBW5 565 aaPredicted RBP8.19□□□□□ -1.1
TTC3-215ENST00000476784 STAC3Q96MF2 364 aa8.19□□□□□ -1.1
TTC3-215ENST00000476784 SIN3AQ96ST3 1273 aa8.19□□□□□ -1.1
TTC3-215ENST00000476784 BEGAINQ9BUH8 593 aa8.19□□□□□ -1.1
TTC3-215ENST00000476784 IFIT2P09913 472 aaKnown RBP8.19□□□□□ -1.1
TTC3-215ENST00000476784 RRP12Q5JTH9 1297 aaKnown RBP8.19□□□□□ -1.1
TTC3-215ENST00000476784 GZF1Q9H116 711 aaPredicted RBP8.19□□□□□ -1.1
TTC3-215ENST00000476784 CSPP1Q1MSJ5 1256 aa8.18□□□□□ -1.1
TTC3-215ENST00000476784 DIAPH3Q9NSV4 1193 aa8.18□□□□□ -1.1
TTC3-215ENST00000476784 BAZ1BQ9UIG0 1483 aaKnown RBP8.18□□□□□ -1.1
TTC3-215ENST00000476784 IPO7O95373 1038 aaKnown RBP8.18□□□□□ -1.1
TTC3-215ENST00000476784 KRT18P05783 430 aaKnown RBP8.18□□□□□ -1.1
TTC3-215ENST00000476784 SYAP1Q96A49 352 aaPredicted RBP8.18□□□□□ -1.1
TTC3-215ENST00000476784 BCL11BQ9C0K0 894 aaPredicted RBP8.18□□□□□ -1.1
TTC3-215ENST00000476784 NGLY1Q96IV0 654 aa8.17□□□□□ -1.1
TTC3-215ENST00000476784 OFD1O75665 1012 aa8.17□□□□□ -1.1
TTC3-215ENST00000476784 G3BP1Q13283 466 aaKnown RBP eCLIP8.17□□□□□ -1.1
TTC3-215ENST00000476784 TMOD2Q9NZR1 351 aa8.17□□□□□ -1.1
TTC3-215ENST00000476784 EIF3AQ14152 1382 aaKnown RBP8.17□□□□□ -1.1
TTC3-215ENST00000476784 PDCL3Q9H2J4 239 aa8.17□□□□□ -1.1
TTC3-215ENST00000476784 ANKRD20A12PQ8NF67 263 aa8.17□□□□□ -1.1
TTC3-215ENST00000476784 CCDC70Q6NSX1 233 aa8.17□□□□□ -1.1
TTC3-215ENST00000476784 ZHX3Q9H4I2 956 aa8.17□□□□□ -1.1
TTC3-215ENST00000476784 RWDD1Q9H446 243 aaPredicted RBP8.16□□□□□ -1.1
TTC3-215ENST00000476784 CDK5RAP3Q96JB5 506 aa8.16□□□□□ -1.1
TTC3-215ENST00000476784 HOMER1Q86YM7 354 aa8.16□□□□□ -1.1
TTC3-215ENST00000476784 CNNM1Q9NRU3 951 aa8.16□□□□□ -1.1
TTC3-215ENST00000476784 SYCP1Q15431 976 aa8.16□□□□□ -1.1
TTC3-215ENST00000476784 PSMD1Q99460 953 aa8.16□□□□□ -1.1
TTC3-215ENST00000476784 ANO2Q9NQ90 1003 aa8.15□□□□□ -1.1
TTC3-215ENST00000476784 HSP90AB4PQ58FF6 505 aa8.15□□□□□ -1.1
TTC3-215ENST00000476784 ZMYND15Q9H091 742 aa8.15□□□□□ -1.1
TTC3-215ENST00000476784 E9PSI1 815 aa8.15□□□□□ -1.1
TTC3-215ENST00000476784 ABTB2Q8N961 1025 aa8.15□□□□□ -1.1
TTC3-215ENST00000476784 NUP155O75694 1391 aa8.15□□□□□ -1.11
TTC3-215ENST00000476784 EP400NLQ6ZTU2 488 aa8.15□□□□□ -1.11
TTC3-215ENST00000476784 BRMS1Q9HCU9 246 aa8.15□□□□□ -1.11
TTC3-215ENST00000476784 SLC3A2P08195 630 aaKnown RBP8.14□□□□□ -1.11
TTC3-215ENST00000476784 KTN1Q86UP2 1357 aaKnown RBP8.14□□□□□ -1.11
TTC3-215ENST00000476784 ZNF710Q8N1W2 664 aa8.14□□□□□ -1.11
TTC3-215ENST00000476784 KIF27Q86VH2 1401 aa8.14□□□□□ -1.11
TTC3-215ENST00000476784 RDXP35241 583 aaKnown RBP8.14□□□□□ -1.11
TTC3-215ENST00000476784 TNNT3P45378 269 aaPredicted RBP8.14□□□□□ -1.11
TTC3-215ENST00000476784 SAFBQ15424 915 aaKnown RBP eCLIP8.14□□□□□ -1.11
TTC3-215ENST00000476784 GPRASP1Q5JY77 1395 aa8.14□□□□□ -1.11
TTC3-215ENST00000476784 SKIDA1Q1XH10 827 aa8.14□□□□□ -1.11
TTC3-215ENST00000476784 RALYLQ86SE5 291 aaKnown RBP8.14□□□□□ -1.11
TTC3-215ENST00000476784 GOLGA6L19H0YKK7 550 aa8.14□□□□□ -1.11
TTC3-215ENST00000476784 GBP4Q96PP9 640 aa8.14□□□□□ -1.11
TTC3-215ENST00000476784 ANKRD62A6NC57 917 aa8.13□□□□□ -1.11
TTC3-215ENST00000476784 BECN2A8MW95 431 aa8.13□□□□□ -1.11
TTC3-215ENST00000476784 NLRP6P59044 892 aa8.13□□□□□ -1.11
TTC3-215ENST00000476784 SART3Q15020 963 aaKnown RBP8.13□□□□□ -1.11
TTC3-215ENST00000476784 CBX1P83916 185 aa8.13□□□□□ -1.11
TTC3-215ENST00000476784 FKBP5Q13451 457 aaPredicted RBP8.13□□□□□ -1.11
TTC3-215ENST00000476784 TRIM21P19474 475 aaKnown RBP8.13□□□□□ -1.11
TTC3-215ENST00000476784 TBC1D2BQ9UPU7 963 aa8.13□□□□□ -1.11
TTC3-215ENST00000476784 ATP2B1P20020 1258 aa8.13□□□□□ -1.11
TTC3-215ENST00000476784 GNL3LQ9NVN8 582 aaKnown RBP8.12□□□□□ -1.11
TTC3-215ENST00000476784 ZNF76P36508 570 aa8.12□□□□□ -1.11
TTC3-215ENST00000476784 CABP4P57796 275 aa8.12□□□□□ -1.11
TTC3-215ENST00000476784 XPCQ01831 940 aaPredicted RBP8.12□□□□□ -1.11
TTC3-215ENST00000476784 VGFO15240 615 aaPredicted RBP8.12□□□□□ -1.11
TTC3-215ENST00000476784 NEFHP12036 1026 aa8.12□□□□□ -1.11
TTC3-215ENST00000476784 PMFBP1Q8TBY8 1022 aa8.12□□□□□ -1.11
TTC3-215ENST00000476784 ZPR1O75312 459 aa8.12□□□□□ -1.11
TTC3-215ENST00000476784 TXNDC2Q86VQ3 553 aa8.12□□□□□ -1.11
TTC3-215ENST00000476784 IL27Q8NEV9 243 aa8.12□□□□□ -1.11
TTC3-215ENST00000476784 PRDM11Q9NQV5 511 aa8.11□□□□□ -1.11
TTC3-215ENST00000476784 NOP2P46087 812 aaKnown RBP8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms