RNA–Protein interactions for RNA: ENST00000476777.5

BRCA1-213, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-213ENST00000476777 ADGRB3O60242 1522 aa17.92■□□□□ 0.46
BRCA1-213ENST00000476777 JCADQ9P266 1359 aa17.91■□□□□ 0.46
BRCA1-213ENST00000476777 LOC105371045A0A1W2PR82 267 aa17.91■□□□□ 0.46
BRCA1-213ENST00000476777 SLC52A1Q9NWF4 448 aa17.91■□□□□ 0.46
BRCA1-213ENST00000476777 ANKRD30AQ9BXX3 1397 aa17.9■□□□□ 0.46
BRCA1-213ENST00000476777 SETD1AO15047 1707 aaKnown RBP17.89■□□□□ 0.46
BRCA1-213ENST00000476777 PHLPP1O60346 1717 aa17.89■□□□□ 0.46
BRCA1-213ENST00000476777 BCANQ96GW7 911 aa17.89■□□□□ 0.45
BRCA1-213ENST00000476777 CHIC2Q9UKJ5 165 aa17.89■□□□□ 0.45
BRCA1-213ENST00000476777 ZFYVE9O95405 1425 aa17.87■□□□□ 0.45
BRCA1-213ENST00000476777 FGD6Q6ZV73 1430 aa17.87■□□□□ 0.45
BRCA1-213ENST00000476777 PLEKHG1Q9ULL1 1385 aa17.86■□□□□ 0.45
BRCA1-213ENST00000476777 CHD2O14647 1828 aaKnown RBP17.86■□□□□ 0.45
BRCA1-213ENST00000476777 COL16A1Q07092 1604 aaPredicted RBP17.85■□□□□ 0.45
BRCA1-213ENST00000476777 SRCAPQ6ZRS2 3230 aa17.83■□□□□ 0.44
BRCA1-213ENST00000476777 LRP6O75581 1613 aa17.83■□□□□ 0.44
BRCA1-213ENST00000476777 RPRD2Q5VT52 1461 aaKnown RBP17.82■□□□□ 0.44
BRCA1-213ENST00000476777 RIMS2Q9UQ26 1411 aa17.82■□□□□ 0.44
BRCA1-213ENST00000476777 NCOA3Q9Y6Q9 1424 aa17.82■□□□□ 0.44
BRCA1-213ENST00000476777 SPATA31A6Q5VVP1 1343 aa17.82■□□□□ 0.44
BRCA1-213ENST00000476777 PPP1R15AO75807 674 aaPredicted RBP17.82■□□□□ 0.44
BRCA1-213ENST00000476777 TBX22Q9Y458 520 aa17.82■□□□□ 0.44
BRCA1-213ENST00000476777 MYO5BQ9ULV0 1848 aa17.82■□□□□ 0.44
BRCA1-213ENST00000476777 HDGFP51858 240 aaKnown RBP17.81■□□□□ 0.44
BRCA1-213ENST00000476777 ZNF772Q68DY9 489 aaPredicted RBP17.8■□□□□ 0.44
BRCA1-213ENST00000476777 UPF1Q92900 1129 aaKnown RBP eCLIP17.8■□□□□ 0.44
BRCA1-213ENST00000476777 ADGRL2O95490 1459 aa17.8■□□□□ 0.44
BRCA1-213ENST00000476777 APLP2Q06481 763 aa17.79■□□□□ 0.44
BRCA1-213ENST00000476777 TMEM131LA2VDJ0 1609 aa17.79■□□□□ 0.44
BRCA1-213ENST00000476777 MEX3CQ5U5Q3 659 aaKnown RBP17.78■□□□□ 0.44
BRCA1-213ENST00000476777 C14orf37Q86TY3 774 aa17.78■□□□□ 0.44
BRCA1-213ENST00000476777 CADPS2Q86UW7 1296 aa17.77■□□□□ 0.44
BRCA1-213ENST00000476777 TRIM52Q96A61 297 aa17.77■□□□□ 0.44
BRCA1-213ENST00000476777 C19orf44Q9H6X5 657 aa17.77■□□□□ 0.44
BRCA1-213ENST00000476777 ADAMTS13Q76LX8 1427 aa17.77■□□□□ 0.44
BRCA1-213ENST00000476777 ANKRD50Q9ULJ7 1429 aa17.77■□□□□ 0.44
BRCA1-213ENST00000476777 GCC2Q8IWJ2 1684 aa17.77■□□□□ 0.43
BRCA1-213ENST00000476777 AHDC1Q5TGY3 1603 aaPredicted RBP17.76■□□□□ 0.43
BRCA1-213ENST00000476777 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.76■□□□□ 0.43
BRCA1-213ENST00000476777 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.75■□□□□ 0.43
BRCA1-213ENST00000476777 ATF3P18847 181 aa17.75■□□□□ 0.43
BRCA1-213ENST00000476777 SHPRHQ149N8 1683 aa17.74■□□□□ 0.43
BRCA1-213ENST00000476777 NUTM2DQ5VT03 806 aaPredicted RBP17.74■□□□□ 0.43
BRCA1-213ENST00000476777 PIK3R4Q99570 1358 aa17.74■□□□□ 0.43
BRCA1-213ENST00000476777 CHGAP10645 457 aaKnown RBP17.73■□□□□ 0.43
BRCA1-213ENST00000476777 RXRBP28702 533 aa17.72■□□□□ 0.43
BRCA1-213ENST00000476777 BRINP3Q76B58 766 aa17.72■□□□□ 0.43
BRCA1-213ENST00000476777 DIP2AQ14689 1571 aa17.71■□□□□ 0.43
BRCA1-213ENST00000476777 FAM50AQ14320 339 aaKnown RBP17.7■□□□□ 0.42
BRCA1-213ENST00000476777 AMOTL2Q9Y2J4 779 aa17.69■□□□□ 0.42
BRCA1-213ENST00000476777 PTPRUQ92729 1446 aa17.69■□□□□ 0.42
BRCA1-213ENST00000476777 CDK12Q9NYV4 1490 aaPredicted RBP17.69■□□□□ 0.42
BRCA1-213ENST00000476777 NUTM2BA6NNL0 878 aaPredicted RBP17.68■□□□□ 0.42
BRCA1-213ENST00000476777 NUTM2EB1AL46 878 aaPredicted RBP17.68■□□□□ 0.42
BRCA1-213ENST00000476777 NUTM2AQ8IVF1 878 aaPredicted RBP17.68■□□□□ 0.42
BRCA1-213ENST00000476777 E9PCH4 1651 aa17.66■□□□□ 0.42
BRCA1-213ENST00000476777 TRPM2O94759 1503 aa17.66■□□□□ 0.42
BRCA1-213ENST00000476777 AFF2P51816 1311 aa17.66■□□□□ 0.42
BRCA1-213ENST00000476777 UNC13BO14795 1591 aa17.66■□□□□ 0.42
BRCA1-213ENST00000476777 DCCP43146 1447 aa17.65■□□□□ 0.42
BRCA1-213ENST00000476777 SETD5Q9C0A6 1442 aa17.64■□□□□ 0.42
BRCA1-213ENST00000476777 ASXL1Q8IXJ9 1541 aa17.64■□□□□ 0.41
BRCA1-213ENST00000476777 MST1RQ04912 1400 aa17.63■□□□□ 0.41
BRCA1-213ENST00000476777 LRRC59Q96AG4 307 aaKnown RBP17.61■□□□□ 0.41
BRCA1-213ENST00000476777 XRN1Q8IZH2 1706 aaKnown RBP17.6■□□□□ 0.41
BRCA1-213ENST00000476777 NHSL1Q5SYE7 1610 aa17.59■□□□□ 0.41
BRCA1-213ENST00000476777 IQGAP3Q86VI3 1631 aa17.59■□□□□ 0.41
BRCA1-213ENST00000476777 NRXN3Q9Y4C0 1643 aa17.59■□□□□ 0.41
BRCA1-213ENST00000476777 RGS12O14924 1447 aa17.59■□□□□ 0.41
BRCA1-213ENST00000476777 RBM6P78332 1123 aaKnown RBP17.59■□□□□ 0.41
BRCA1-213ENST00000476777 QTRT2Q9H974 415 aaKnown RBP17.59■□□□□ 0.41
BRCA1-213ENST00000476777 DDX17Q92841 729 aaKnown RBP17.58■□□□□ 0.4
BRCA1-213ENST00000476777 C8orf37Q96NL8 207 aa17.58■□□□□ 0.4
BRCA1-213ENST00000476777 SETBP1Q9Y6X0 1596 aa17.57■□□□□ 0.4
BRCA1-213ENST00000476777 NUP155O75694 1391 aa17.57■□□□□ 0.4
BRCA1-213ENST00000476777 METP08581 1390 aa17.57■□□□□ 0.4
BRCA1-213ENST00000476777 ROCK1Q13464 1354 aa17.57■□□□□ 0.4
BRCA1-213ENST00000476777 PNPLA6Q8IY17 1366 aa17.57■□□□□ 0.4
BRCA1-213ENST00000476777 ADGRL3Q9HAR2 1447 aa17.55■□□□□ 0.4
BRCA1-213ENST00000476777 EP400Q96L91 3159 aa17.54■□□□□ 0.4
BRCA1-213ENST00000476777 ADAMTS2O95450 1211 aa17.51■□□□□ 0.39
BRCA1-213ENST00000476777 ZNF326Q5BKZ1 582 aaKnown RBP17.51■□□□□ 0.39
BRCA1-213ENST00000476777 NGLY1Q96IV0 654 aa17.51■□□□□ 0.39
BRCA1-213ENST00000476777 C1orf167Q5SNV9 1468 aa17.5■□□□□ 0.39
BRCA1-213ENST00000476777 NALCNQ8IZF0 1738 aa17.49■□□□□ 0.39
BRCA1-213ENST00000476777 SPHKAPQ2M3C7 1700 aa17.47■□□□□ 0.39
BRCA1-213ENST00000476777 ATAD2Q6PL18 1390 aa17.47■□□□□ 0.39
BRCA1-213ENST00000476777 SOS2Q07890 1332 aaPredicted RBP17.47■□□□□ 0.39
BRCA1-213ENST00000476777 USP21Q9UK80 565 aa17.46■□□□□ 0.39
BRCA1-213ENST00000476777 LAMC1P11047 1609 aa17.46■□□□□ 0.39
BRCA1-213ENST00000476777 ORAI2Q96SN7 254 aa17.45■□□□□ 0.38
BRCA1-213ENST00000476777 TRPC5Q9UL62 973 aaPredicted RBP17.45■□□□□ 0.38
BRCA1-213ENST00000476777 NEXMIFQ5QGS0 1516 aa17.45■□□□□ 0.38
BRCA1-213ENST00000476777 FNBP4Q8N3X1 1017 aaPredicted RBP17.44■□□□□ 0.38
BRCA1-213ENST00000476777 ITGAEP38570 1179 aa17.43■□□□□ 0.38
BRCA1-213ENST00000476777 PTCH1Q13635 1447 aa17.43■□□□□ 0.38
BRCA1-213ENST00000476777 ROBO2Q9HCK4 1378 aa17.42■□□□□ 0.38
BRCA1-213ENST00000476777 ATRNO75882 1429 aa17.42■□□□□ 0.38
BRCA1-213ENST00000476777 CLTCL1P53675 1640 aa17.41■□□□□ 0.38
BRCA1-213ENST00000476777 ZRANB1Q9UGI0 708 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms