RNA–Protein interactions for RNA: ENST00000476594.1

CCM2-208, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 533 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-208ENST00000476594 SOCS7O14512 581 aa15.28■□□□□ 0.04
CCM2-208ENST00000476594 TOM1O60784 492 aa15.27■□□□□ 0.04
CCM2-208ENST00000476594 SPHKAPQ2M3C7 1700 aa15.26■□□□□ 0.03
CCM2-208ENST00000476594 TMEM131LA2VDJ0 1609 aa15.26■□□□□ 0.03
CCM2-208ENST00000476594 RIMS2Q9UQ26 1411 aa15.26■□□□□ 0.03
CCM2-208ENST00000476594 PLEKHG1Q9ULL1 1385 aa15.24■□□□□ 0.03
CCM2-208ENST00000476594 SLC4A1APQ9BWU0 796 aaKnown RBP15.24■□□□□ 0.03
CCM2-208ENST00000476594 ZFYVE9O95405 1425 aa15.24■□□□□ 0.03
CCM2-208ENST00000476594 TRPM2O94759 1503 aa15.22■□□□□ 0.03
CCM2-208ENST00000476594 ZNF326Q5BKZ1 582 aaKnown RBP15.21■□□□□ 0.03
CCM2-208ENST00000476594 MYO5BQ9ULV0 1848 aa15.21■□□□□ 0.03
CCM2-208ENST00000476594 SCAF1Q9H7N4 1312 aaKnown RBP15.2■□□□□ 0.02
CCM2-208ENST00000476594 KCNA6P17658 529 aa15.2■□□□□ 0.02
CCM2-208ENST00000476594 SLC26A8Q96RN1 970 aa15.2■□□□□ 0.02
CCM2-208ENST00000476594 LRRC7Q96NW7 1537 aa15.2■□□□□ 0.02
CCM2-208ENST00000476594 ILDR2Q71H61 639 aa15.19■□□□□ 0.02
CCM2-208ENST00000476594 DIP2AQ14689 1571 aa15.19■□□□□ 0.02
CCM2-208ENST00000476594 NKTRP30414 1462 aaKnown RBP15.18■□□□□ 0.02
CCM2-208ENST00000476594 SETD5Q9C0A6 1442 aa15.17■□□□□ 0.02
CCM2-208ENST00000476594 TBX22Q9Y458 520 aa15.17■□□□□ 0.02
CCM2-208ENST00000476594 KIF1BO60333 1816 aa15.17■□□□□ 0.02
CCM2-208ENST00000476594 PIK3R4Q99570 1358 aa15.16■□□□□ 0.02
CCM2-208ENST00000476594 STRCP1A6NGW2 1772 aa15.16■□□□□ 0.02
CCM2-208ENST00000476594 NWD1Q149M9 1564 aa15.15■□□□□ 0.02
CCM2-208ENST00000476594 CLTCL1P53675 1640 aa15.15■□□□□ 0.02
CCM2-208ENST00000476594 PIP4K2BP78356 416 aa15.15■□□□□ 0.02
CCM2-208ENST00000476594 PROSER2Q86WR7 435 aaPredicted RBP15.15■□□□□ 0.02
CCM2-208ENST00000476594 CCDC144AA2RUR9 1427 aa15.13■□□□□ 0.01
CCM2-208ENST00000476594 NUTM2DQ5VT03 806 aaPredicted RBP15.13■□□□□ 0.01
CCM2-208ENST00000476594 MPHOSPH9Q99550 1183 aa15.13■□□□□ 0.01
CCM2-208ENST00000476594 RPGRIP1LQ68CZ1 1315 aa15.13■□□□□ 0.01
CCM2-208ENST00000476594 TMEM94Q12767 1356 aa15.12■□□□□ 0.01
CCM2-208ENST00000476594 VGFO15240 615 aaPredicted RBP15.11■□□□□ 0.01
CCM2-208ENST00000476594 MSH6P52701 1360 aa15.11■□□□□ 0.01
CCM2-208ENST00000476594 ADAMTS13Q76LX8 1427 aa15.1■□□□□ 0.01
CCM2-208ENST00000476594 NCOA3Q9Y6Q9 1424 aa15.1■□□□□ 0.01
CCM2-208ENST00000476594 SETBP1Q9Y6X0 1596 aa15.1■□□□□ 0.01
CCM2-208ENST00000476594 CHD2O14647 1828 aaKnown RBP15.1■□□□□ 0.01
CCM2-208ENST00000476594 RAB3GAP2Q9H2M9 1393 aa15.09■□□□□ 0.01
CCM2-208ENST00000476594 NEXMIFQ5QGS0 1516 aa15.08■□□□□ 0.01
CCM2-208ENST00000476594 C14orf37Q86TY3 774 aa15.08■□□□□ 0
CCM2-208ENST00000476594 DISP3Q9P2K9 1392 aa15.07■□□□□ 0
CCM2-208ENST00000476594 HRCP23327 699 aa15.06■□□□□ 0
CCM2-208ENST00000476594 AMOTL2Q9Y2J4 779 aa15.05■□□□□ -0
CCM2-208ENST00000476594 XIRP1Q702N8 1843 aaKnown RBP15.05■□□□□ -0
CCM2-208ENST00000476594 HSPA1LP34931 641 aa15.04■□□□□ -0
CCM2-208ENST00000476594 ANKRD30BQ9BXX2 1392 aa15.03■□□□□ -0
CCM2-208ENST00000476594 ALKQ9UM73 1620 aa15.03■□□□□ -0
CCM2-208ENST00000476594 NRXN3Q9Y4C0 1643 aa15.03■□□□□ -0
CCM2-208ENST00000476594 FAM135BQ49AJ0 1406 aa15.02■□□□□ -0
CCM2-208ENST00000476594 ATF3P18847 181 aa15.02■□□□□ -0
CCM2-208ENST00000476594 CADPS2Q86UW7 1296 aa15.02■□□□□ -0
CCM2-208ENST00000476594 MSH5O43196 834 aa15.01□□□□□ -0.01
CCM2-208ENST00000476594 C19orf44Q9H6X5 657 aa15.01□□□□□ -0.01
CCM2-208ENST00000476594 PPLO60437 1756 aa15.01□□□□□ -0.01
CCM2-208ENST00000476594 RGL3Q3MIN7 710 aa15□□□□□ -0.01
CCM2-208ENST00000476594 RBM33Q96EV2 1170 aaKnown RBP15□□□□□ -0.01
CCM2-208ENST00000476594 XRN1Q8IZH2 1706 aaKnown RBP15□□□□□ -0.01
CCM2-208ENST00000476594 DCCP43146 1447 aa14.99□□□□□ -0.01
CCM2-208ENST00000476594 SPATA31E1Q6ZUB1 1445 aa14.99□□□□□ -0.01
CCM2-208ENST00000476594 PTPRUQ92729 1446 aa14.99□□□□□ -0.01
CCM2-208ENST00000476594 METP08581 1390 aa14.98□□□□□ -0.01
CCM2-208ENST00000476594 SLAIN2Q9P270 581 aa14.98□□□□□ -0.01
CCM2-208ENST00000476594 PTCH1Q13635 1447 aa14.97□□□□□ -0.01
CCM2-208ENST00000476594 ROBO1Q9Y6N7 1651 aa14.96□□□□□ -0.01
CCM2-208ENST00000476594 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.94□□□□□ -0.02
CCM2-208ENST00000476594 PRAG1Q86YV5 1406 aa14.93□□□□□ -0.02
CCM2-208ENST00000476594 ADGRL3Q9HAR2 1447 aa14.93□□□□□ -0.02
CCM2-208ENST00000476594 IFT172Q9UG01 1749 aa14.93□□□□□ -0.02
CCM2-208ENST00000476594 STAC3Q96MF2 364 aa14.93□□□□□ -0.02
CCM2-208ENST00000476594 ADGRF5Q8IZF2 1346 aa14.92□□□□□ -0.02
CCM2-208ENST00000476594 MYOM2P54296 1465 aa14.92□□□□□ -0.02
CCM2-208ENST00000476594 SETD1AO15047 1707 aaKnown RBP14.92□□□□□ -0.02
CCM2-208ENST00000476594 PIK3C2GO75747 1445 aa14.92□□□□□ -0.02
CCM2-208ENST00000476594 PIAS4Q8N2W9 510 aaPredicted RBP14.91□□□□□ -0.02
CCM2-208ENST00000476594 LAMC1P11047 1609 aa14.91□□□□□ -0.02
CCM2-208ENST00000476594 MED1Q15648 1581 aaPredicted RBP14.9□□□□□ -0.02
CCM2-208ENST00000476594 PHLPP1O60346 1717 aa14.89□□□□□ -0.03
CCM2-208ENST00000476594 LRPPRCP42704 1394 aaKnown RBP14.87□□□□□ -0.03
CCM2-208ENST00000476594 DHX57Q6P158 1386 aaKnown RBP14.87□□□□□ -0.03
CCM2-208ENST00000476594 ROBO2Q9HCK4 1378 aa14.87□□□□□ -0.03
CCM2-208ENST00000476594 JCADQ9P266 1359 aa14.86□□□□□ -0.03
CCM2-208ENST00000476594 TECPR2O15040 1411 aa14.86□□□□□ -0.03
CCM2-208ENST00000476594 MST1RQ04912 1400 aa14.86□□□□□ -0.03
CCM2-208ENST00000476594 NRXN1Q9ULB1 1477 aa14.86□□□□□ -0.03
CCM2-208ENST00000476594 NALCNQ8IZF0 1738 aa14.86□□□□□ -0.03
CCM2-208ENST00000476594 ABCC11Q96J66 1382 aa14.85□□□□□ -0.03
CCM2-208ENST00000476594 AHDC1Q5TGY3 1603 aaPredicted RBP14.85□□□□□ -0.03
CCM2-208ENST00000476594 BRINP3Q76B58 766 aa14.85□□□□□ -0.03
CCM2-208ENST00000476594 C14orf93Q9H972 538 aaKnown RBP14.85□□□□□ -0.03
CCM2-208ENST00000476594 STK26Q9P289 416 aa14.85□□□□□ -0.03
CCM2-208ENST00000476594 KNDC1Q76NI1 1749 aa14.85□□□□□ -0.03
CCM2-208ENST00000476594 YTHDC2Q9H6S0 1430 aaKnown RBP14.84□□□□□ -0.03
CCM2-208ENST00000476594 ASXL1Q8IXJ9 1541 aa14.83□□□□□ -0.04
CCM2-208ENST00000476594 DCAF11Q8TEB1 546 aa14.83□□□□□ -0.04
CCM2-208ENST00000476594 SIRT1Q96EB6 747 aa14.83□□□□□ -0.04
CCM2-208ENST00000476594 CDC42BPGQ6DT37 1551 aa14.82□□□□□ -0.04
CCM2-208ENST00000476594 TMEM132EQ6IEE7 984 aa14.82□□□□□ -0.04
CCM2-208ENST00000476594 POTEDQ86YR6 584 aa14.82□□□□□ -0.04
CCM2-208ENST00000476594 COL16A1Q07092 1604 aaPredicted RBP14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms