RNA–Protein interactions for RNA: ENST00000476535.1

LCLAT1-208, Transcript of lysocardiolipin acyltransferase 1, humanhuman

TSL 4

Gene LCLAT1, Length 537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCLAT1-208ENST00000476535 SPHKAPQ2M3C7 1700 aa26.74■■□□□ 1.87
LCLAT1-208ENST00000476535 PIP4K2BP78356 416 aa26.73■■□□□ 1.87
LCLAT1-208ENST00000476535 NWD1Q149M9 1564 aa26.72■■□□□ 1.87
LCLAT1-208ENST00000476535 SCAF1Q9H7N4 1312 aaKnown RBP26.72■■□□□ 1.87
LCLAT1-208ENST00000476535 KCNA6P17658 529 aa26.72■■□□□ 1.87
LCLAT1-208ENST00000476535 SLC26A8Q96RN1 970 aa26.72■■□□□ 1.87
LCLAT1-208ENST00000476535 HFM1A2PYH4 1435 aa26.72■■□□□ 1.87
LCLAT1-208ENST00000476535 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.7■■□□□ 1.86
LCLAT1-208ENST00000476535 NKTRP30414 1462 aaKnown RBP26.69■■□□□ 1.86
LCLAT1-208ENST00000476535 CHGAP10645 457 aaKnown RBP26.69■■□□□ 1.86
LCLAT1-208ENST00000476535 DISP3Q9P2K9 1392 aa26.69■■□□□ 1.86
LCLAT1-208ENST00000476535 PPP1R15AO75807 674 aaPredicted RBP26.68■■□□□ 1.86
LCLAT1-208ENST00000476535 HSPA1LP34931 641 aa26.67■■□□□ 1.86
LCLAT1-208ENST00000476535 CHD2O14647 1828 aaKnown RBP26.66■■□□□ 1.86
LCLAT1-208ENST00000476535 BCANQ96GW7 911 aa26.65■■□□□ 1.86
LCLAT1-208ENST00000476535 DIP2AQ14689 1571 aa26.64■■□□□ 1.86
LCLAT1-208ENST00000476535 TMEM94Q12767 1356 aa26.64■■□□□ 1.86
LCLAT1-208ENST00000476535 TRPM2O94759 1503 aa26.62■■□□□ 1.85
LCLAT1-208ENST00000476535 TBX22Q9Y458 520 aa26.62■■□□□ 1.85
LCLAT1-208ENST00000476535 ADAMTS13Q76LX8 1427 aa26.61■■□□□ 1.85
LCLAT1-208ENST00000476535 PROSER2Q86WR7 435 aaPredicted RBP26.6■■□□□ 1.85
LCLAT1-208ENST00000476535 CLTCL1P53675 1640 aa26.59■■□□□ 1.85
LCLAT1-208ENST00000476535 PIK3R4Q99570 1358 aa26.57■■□□□ 1.84
LCLAT1-208ENST00000476535 NUTM2DQ5VT03 806 aaPredicted RBP26.55■■□□□ 1.84
LCLAT1-208ENST00000476535 SENP3Q9H4L4 574 aaPredicted RBP26.55■■□□□ 1.84
LCLAT1-208ENST00000476535 KIF1BO60333 1816 aa26.55■■□□□ 1.84
LCLAT1-208ENST00000476535 TRIM52Q96A61 297 aa26.53■■□□□ 1.84
LCLAT1-208ENST00000476535 SETBP1Q9Y6X0 1596 aa26.53■■□□□ 1.84
LCLAT1-208ENST00000476535 FAM135BQ49AJ0 1406 aa26.52■■□□□ 1.84
LCLAT1-208ENST00000476535 NRXN3Q9Y4C0 1643 aa26.51■■□□□ 1.83
LCLAT1-208ENST00000476535 NCOA3Q9Y6Q9 1424 aa26.51■■□□□ 1.83
LCLAT1-208ENST00000476535 MED1Q15648 1581 aaPredicted RBP26.5■■□□□ 1.83
LCLAT1-208ENST00000476535 MSH6P52701 1360 aa26.5■■□□□ 1.83
LCLAT1-208ENST00000476535 NEXMIFQ5QGS0 1516 aa26.49■■□□□ 1.83
LCLAT1-208ENST00000476535 RBM33Q96EV2 1170 aaKnown RBP26.49■■□□□ 1.83
LCLAT1-208ENST00000476535 ZNF326Q5BKZ1 582 aaKnown RBP26.48■■□□□ 1.83
LCLAT1-208ENST00000476535 ILDR2Q71H61 639 aa26.48■■□□□ 1.83
LCLAT1-208ENST00000476535 SLC4A1APQ9BWU0 796 aaKnown RBP26.48■■□□□ 1.83
LCLAT1-208ENST00000476535 ROBO1Q9Y6N7 1651 aa26.45■■□□□ 1.82
LCLAT1-208ENST00000476535 XRN1Q8IZH2 1706 aaKnown RBP26.43■■□□□ 1.82
LCLAT1-208ENST00000476535 PTPRUQ92729 1446 aa26.43■■□□□ 1.82
LCLAT1-208ENST00000476535 AMOTL2Q9Y2J4 779 aa26.4■■□□□ 1.82
LCLAT1-208ENST00000476535 SLAIN2Q9P270 581 aa26.38■■□□□ 1.81
LCLAT1-208ENST00000476535 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.38■■□□□ 1.81
LCLAT1-208ENST00000476535 ACIN1Q9UKV3 1341 aaKnown RBP26.38■■□□□ 1.81
LCLAT1-208ENST00000476535 RPGRIP1LQ68CZ1 1315 aa26.37■■□□□ 1.81
LCLAT1-208ENST00000476535 METP08581 1390 aa26.36■■□□□ 1.81
LCLAT1-208ENST00000476535 PPLO60437 1756 aa26.35■■□□□ 1.81
LCLAT1-208ENST00000476535 C19orf44Q9H6X5 657 aa26.35■■□□□ 1.81
LCLAT1-208ENST00000476535 VGFO15240 615 aaPredicted RBP26.34■■□□□ 1.81
LCLAT1-208ENST00000476535 C14orf37Q86TY3 774 aa26.34■■□□□ 1.81
LCLAT1-208ENST00000476535 CADPS2Q86UW7 1296 aa26.33■■□□□ 1.81
LCLAT1-208ENST00000476535 SETD1AO15047 1707 aaKnown RBP26.33■■□□□ 1.81
LCLAT1-208ENST00000476535 DCCP43146 1447 aa26.32■■□□□ 1.8
LCLAT1-208ENST00000476535 MPHOSPH9Q99550 1183 aa26.32■■□□□ 1.8
LCLAT1-208ENST00000476535 SETD5Q9C0A6 1442 aa26.31■■□□□ 1.8
LCLAT1-208ENST00000476535 SOCS7O14512 581 aa26.31■■□□□ 1.8
LCLAT1-208ENST00000476535 FOXD1Q16676 465 aa26.31■■□□□ 1.8
LCLAT1-208ENST00000476535 CCDC144AA2RUR9 1427 aa26.31■■□□□ 1.8
LCLAT1-208ENST00000476535 PHLPP1O60346 1717 aa26.29■■□□□ 1.8
LCLAT1-208ENST00000476535 ATF3P18847 181 aa26.28■■□□□ 1.8
LCLAT1-208ENST00000476535 SPATA31E1Q6ZUB1 1445 aa26.25■■□□□ 1.79
LCLAT1-208ENST00000476535 PRAG1Q86YV5 1406 aa26.25■■□□□ 1.79
LCLAT1-208ENST00000476535 PHF23Q9BUL5 403 aaPredicted RBP26.25■■□□□ 1.79
LCLAT1-208ENST00000476535 PTCH1Q13635 1447 aa26.23■■□□□ 1.79
LCLAT1-208ENST00000476535 IFT172Q9UG01 1749 aa26.23■■□□□ 1.79
LCLAT1-208ENST00000476535 COL16A1Q07092 1604 aaPredicted RBP26.23■■□□□ 1.79
LCLAT1-208ENST00000476535 AHDC1Q5TGY3 1603 aaPredicted RBP26.23■■□□□ 1.79
LCLAT1-208ENST00000476535 ADGRL3Q9HAR2 1447 aa26.22■■□□□ 1.79
LCLAT1-208ENST00000476535 NALCNQ8IZF0 1738 aa26.21■■□□□ 1.79
LCLAT1-208ENST00000476535 RAB3GAP2Q9H2M9 1393 aa26.2■■□□□ 1.79
LCLAT1-208ENST00000476535 ANKRD30BQ9BXX2 1392 aa26.2■■□□□ 1.78
LCLAT1-208ENST00000476535 JCADQ9P266 1359 aa26.19■■□□□ 1.78
LCLAT1-208ENST00000476535 MST1RQ04912 1400 aa26.18■■□□□ 1.78
LCLAT1-208ENST00000476535 RGL3Q3MIN7 710 aa26.15■■□□□ 1.78
LCLAT1-208ENST00000476535 BRINP3Q76B58 766 aa26.15■■□□□ 1.78
LCLAT1-208ENST00000476535 ROBO2Q9HCK4 1378 aa26.15■■□□□ 1.78
LCLAT1-208ENST00000476535 ADGRF5Q8IZF2 1346 aa26.14■■□□□ 1.78
LCLAT1-208ENST00000476535 ASXL1Q8IXJ9 1541 aa26.14■■□□□ 1.78
LCLAT1-208ENST00000476535 NHSL1Q5SYE7 1610 aa26.11■■□□□ 1.77
LCLAT1-208ENST00000476535 SHPRHQ149N8 1683 aa26.11■■□□□ 1.77
LCLAT1-208ENST00000476535 RGS17Q9UGC6 210 aaPredicted RBP26.1■■□□□ 1.77
LCLAT1-208ENST00000476535 PIK3C2GO75747 1445 aa26.1■■□□□ 1.77
LCLAT1-208ENST00000476535 HRCP23327 699 aa26.08■■□□□ 1.77
LCLAT1-208ENST00000476535 TECPR2O15040 1411 aa26.07■■□□□ 1.76
LCLAT1-208ENST00000476535 SPATA31A6Q5VVP1 1343 aa26.07■■□□□ 1.76
LCLAT1-208ENST00000476535 KNDC1Q76NI1 1749 aa26.06■■□□□ 1.76
LCLAT1-208ENST00000476535 MYOM2P54296 1465 aa26.05■■□□□ 1.76
LCLAT1-208ENST00000476535 C1orf167Q5SNV9 1468 aa26.05■■□□□ 1.76
LCLAT1-208ENST00000476535 NRXN1Q9ULB1 1477 aa26.04■■□□□ 1.76
LCLAT1-208ENST00000476535 LRPPRCP42704 1394 aaKnown RBP26.04■■□□□ 1.76
LCLAT1-208ENST00000476535 LAMC1P11047 1609 aa26.03■■□□□ 1.76
LCLAT1-208ENST00000476535 ABCC11Q96J66 1382 aa26.02■■□□□ 1.76
LCLAT1-208ENST00000476535 CDC42BPGQ6DT37 1551 aa26.02■■□□□ 1.76
LCLAT1-208ENST00000476535 LRP6O75581 1613 aa26■■□□□ 1.75
LCLAT1-208ENST00000476535 C14orf93Q9H972 538 aaKnown RBP25.97■■□□□ 1.75
LCLAT1-208ENST00000476535 YTHDC2Q9H6S0 1430 aaKnown RBP25.97■■□□□ 1.75
LCLAT1-208ENST00000476535 LRRC59Q96AG4 307 aaKnown RBP25.96■■□□□ 1.75
LCLAT1-208ENST00000476535 TMEM132EQ6IEE7 984 aa25.95■■□□□ 1.74
LCLAT1-208ENST00000476535 POTEAQ6S8J7 498 aa25.95■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms