RNA–Protein interactions for RNA: ENST00000476169.1

VPS13D-207, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-207ENST00000476169 HOXB1P14653 301 aaPredicted RBP7.41□□□□□ -1.22
VPS13D-207ENST00000476169 RIC3Q7Z5B4 369 aa7.41□□□□□ -1.22
VPS13D-207ENST00000476169 NUTM1Q86Y26 1132 aa7.41□□□□□ -1.22
VPS13D-207ENST00000476169 LIMD1Q9UGP4 676 aa7.41□□□□□ -1.22
VPS13D-207ENST00000476169 RFC5P40937 340 aa7.4□□□□□ -1.22
VPS13D-207ENST00000476169 KCNK17Q96T54 332 aa7.4□□□□□ -1.22
VPS13D-207ENST00000476169 TMEM134Q9H6X4 195 aa7.4□□□□□ -1.22
VPS13D-207ENST00000476169 SPDYE5A6NIY4 337 aa7.39□□□□□ -1.23
VPS13D-207ENST00000476169 TRIM26Q12899 539 aaPredicted RBP7.39□□□□□ -1.23
VPS13D-207ENST00000476169 PROSER2Q86WR7 435 aaPredicted RBP7.39□□□□□ -1.23
VPS13D-207ENST00000476169 BANK1Q8NDB2 785 aa7.39□□□□□ -1.23
VPS13D-207ENST00000476169 KCNH8Q96L42 1107 aa7.39□□□□□ -1.23
VPS13D-207ENST00000476169 SPTLC1O15269 473 aa7.38□□□□□ -1.23
VPS13D-207ENST00000476169 PROX2Q3B8N5 592 aa7.38□□□□□ -1.23
VPS13D-207ENST00000476169 TMEM259Q4ZIN3 620 aa7.38□□□□□ -1.23
VPS13D-207ENST00000476169 RDH13Q8NBN7 331 aa7.38□□□□□ -1.23
VPS13D-207ENST00000476169 POM121Q96HA1 1249 aa7.38□□□□□ -1.23
VPS13D-207ENST00000476169 SMAPO00193 183 aa7.37□□□□□ -1.23
VPS13D-207ENST00000476169 TUSC1Q2TAM9 212 aa7.37□□□□□ -1.23
VPS13D-207ENST00000476169 PPP2R2DQ66LE6 453 aa7.37□□□□□ -1.23
VPS13D-207ENST00000476169 RSBN1LQ6PCB5 846 aaPredicted RBP7.37□□□□□ -1.23
VPS13D-207ENST00000476169 MOXD2PA6NHM9 499 aa7.36□□□□□ -1.23
VPS13D-207ENST00000476169 CSPP1Q1MSJ5 1256 aa7.36□□□□□ -1.23
VPS13D-207ENST00000476169 FBXO31Q5XUX0 539 aaPredicted RBP7.36□□□□□ -1.23
VPS13D-207ENST00000476169 NPM2Q86SE8 214 aaKnown RBP7.36□□□□□ -1.23
VPS13D-207ENST00000476169 SNRKQ9NRH2 765 aa7.36□□□□□ -1.23
VPS13D-207ENST00000476169 CCDC82Q8N4S0 544 aa7.35□□□□□ -1.23
VPS13D-207ENST00000476169 NDUFV2P19404 249 aa7.34□□□□□ -1.23
VPS13D-207ENST00000476169 GJA5P36382 358 aa7.34□□□□□ -1.23
VPS13D-207ENST00000476169 KIAA1468Q9P260 1216 aa7.34□□□□□ -1.23
VPS13D-207ENST00000476169 ZNF777Q9ULD5 760 aaPredicted RBP7.34□□□□□ -1.23
VPS13D-207ENST00000476169 COG6Q9Y2V7 657 aa7.34□□□□□ -1.23
VPS13D-207ENST00000476169 KDM4AO75164 1064 aa7.33□□□□□ -1.24
VPS13D-207ENST00000476169 RSPH4AQ5TD94 716 aa7.33□□□□□ -1.24
VPS13D-207ENST00000476169 FNBP4Q8N3X1 1017 aaPredicted RBP7.33□□□□□ -1.24
VPS13D-207ENST00000476169 ZBED2Q9BTP6 218 aa7.33□□□□□ -1.24
VPS13D-207ENST00000476169 NUTM2BA6NNL0 878 aaPredicted RBP7.32□□□□□ -1.24
VPS13D-207ENST00000476169 NUTM2EB1AL46 878 aaPredicted RBP7.32□□□□□ -1.24
VPS13D-207ENST00000476169 QPCTQ16769 361 aa7.32□□□□□ -1.24
VPS13D-207ENST00000476169 NUTM2DQ5VT03 806 aaPredicted RBP7.32□□□□□ -1.24
VPS13D-207ENST00000476169 NUTM2AQ8IVF1 878 aaPredicted RBP7.32□□□□□ -1.24
VPS13D-207ENST00000476169 LILRB3O75022 631 aa7.31□□□□□ -1.24
VPS13D-207ENST00000476169 AP1G2O75843 785 aa7.31□□□□□ -1.24
VPS13D-207ENST00000476169 PSEN2P49810 448 aa7.31□□□□□ -1.24
VPS13D-207ENST00000476169 USP46P62068 366 aa7.31□□□□□ -1.24
VPS13D-207ENST00000476169 MTMR14Q8NCE2 650 aa7.31□□□□□ -1.24
VPS13D-207ENST00000476169 PCDHB15Q9Y5E8 787 aa7.31□□□□□ -1.24
VPS13D-207ENST00000476169 GCGRP47871 477 aa7.3□□□□□ -1.24
VPS13D-207ENST00000476169 RTL5Q5HYW3 569 aaPredicted RBP7.3□□□□□ -1.24
VPS13D-207ENST00000476169 SWT1Q5T5J6 900 aaKnown RBP7.3□□□□□ -1.24
VPS13D-207ENST00000476169 CABLES1Q8TDN4 633 aa7.3□□□□□ -1.24
VPS13D-207ENST00000476169 CCDC97Q96F63 343 aaPredicted RBP7.3□□□□□ -1.24
VPS13D-207ENST00000476169 ARHGAP33O14559 1287 aa7.29□□□□□ -1.24
VPS13D-207ENST00000476169 HOXA2O43364 376 aa7.29□□□□□ -1.24
VPS13D-207ENST00000476169 FDX1P10109 184 aa7.29□□□□□ -1.24
VPS13D-207ENST00000476169 PRPF38BQ5VTL8 546 aaKnown RBP7.29□□□□□ -1.24
VPS13D-207ENST00000476169 WWC1Q8IX03 1113 aa7.29□□□□□ -1.24
VPS13D-207ENST00000476169 ZBTB3Q9H5J0 574 aa7.29□□□□□ -1.24
VPS13D-207ENST00000476169 GDPD2Q9HCC8 539 aa7.29□□□□□ -1.24
VPS13D-207ENST00000476169 PRM3Q9NNZ6 103 aa7.29□□□□□ -1.24
VPS13D-207ENST00000476169 SEPT9Q9UHD8 586 aaPredicted RBP7.29□□□□□ -1.24
VPS13D-207ENST00000476169 RABGEF1Q9UJ41 708 aa7.29□□□□□ -1.24
VPS13D-207ENST00000476169 ZNF330Q9Y3S2 320 aaPredicted RBP7.29□□□□□ -1.24
VPS13D-207ENST00000476169 ERBB3P21860 1342 aa7.28□□□□□ -1.24
VPS13D-207ENST00000476169 USP17L8P0C7I0 530 aa7.28□□□□□ -1.24
VPS13D-207ENST00000476169 SLC4A3P48751 1232 aa7.28□□□□□ -1.24
VPS13D-207ENST00000476169 HDGFP51858 240 aaKnown RBP7.28□□□□□ -1.24
VPS13D-207ENST00000476169 VARS2Q5ST30 1063 aaKnown RBP7.28□□□□□ -1.24
VPS13D-207ENST00000476169 SERPINA10Q9UK55 444 aa7.28□□□□□ -1.24
VPS13D-207ENST00000476169 SOCS7O14512 581 aa7.27□□□□□ -1.25
VPS13D-207ENST00000476169 SLC10A3P09131 477 aa7.27□□□□□ -1.25
VPS13D-207ENST00000476169 HRCP23327 699 aa7.27□□□□□ -1.25
VPS13D-207ENST00000476169 SLC4A5Q9BY07 1137 aa7.27□□□□□ -1.25
VPS13D-207ENST00000476169 ABL2P42684 1182 aa7.26□□□□□ -1.25
VPS13D-207ENST00000476169 FAM98CQ17RN3 349 aaKnown RBP7.26□□□□□ -1.25
VPS13D-207ENST00000476169 DMRTA1Q5VZB9 504 aa7.26□□□□□ -1.25
VPS13D-207ENST00000476169 OTUD5Q96G74 571 aa7.26□□□□□ -1.25
VPS13D-207ENST00000476169 GUCA2AQ02747 115 aa7.25□□□□□ -1.25
VPS13D-207ENST00000476169 PLSCR2Q9NRY7 297 aa7.25□□□□□ -1.25
VPS13D-207ENST00000476169 PCDHGC3Q9UN70 934 aa7.25□□□□□ -1.25
VPS13D-207ENST00000476169 TBC1D2BQ9UPU7 963 aa7.25□□□□□ -1.25
VPS13D-207ENST00000476169 AXIN2Q9Y2T1 843 aa7.25□□□□□ -1.25
VPS13D-207ENST00000476169 PBX2P40425 430 aa7.24□□□□□ -1.25
VPS13D-207ENST00000476169 POTEEQ6S8J3 1075 aa7.24□□□□□ -1.25
VPS13D-207ENST00000476169 SLF2Q8IX21 1173 aa7.24□□□□□ -1.25
VPS13D-207ENST00000476169 HLA-CQ95604 372 aa7.24□□□□□ -1.25
VPS13D-207ENST00000476169 RNF40O75150 1001 aa7.23□□□□□ -1.25
VPS13D-207ENST00000476169 CFHP08603 1231 aa7.23□□□□□ -1.25
VPS13D-207ENST00000476169 MTMR2Q13614 643 aa7.23□□□□□ -1.25
VPS13D-207ENST00000476169 GRIPAP1Q4V328 841 aa7.23□□□□□ -1.25
VPS13D-207ENST00000476169 SAMD7Q7Z3H4 446 aa7.23□□□□□ -1.25
VPS13D-207ENST00000476169 VPS9D1Q9Y2B5 631 aa7.23□□□□□ -1.25
VPS13D-207ENST00000476169 ZBTB7CA1YPR0 619 aa7.22□□□□□ -1.25
VPS13D-207ENST00000476169 EMP3P54852 163 aa7.22□□□□□ -1.25
VPS13D-207ENST00000476169 FUT2Q10981 343 aa7.22□□□□□ -1.25
VPS13D-207ENST00000476169 LAPTM4BQ86VI4 370 aa7.22□□□□□ -1.25
VPS13D-207ENST00000476169 HELBQ8NG08 1087 aaPredicted RBP7.22□□□□□ -1.25
VPS13D-207ENST00000476169 TSC1Q92574 1164 aa7.22□□□□□ -1.25
VPS13D-207ENST00000476169 NBPF3Q9H094 633 aa7.22□□□□□ -1.25
VPS13D-207ENST00000476169 NDUFB9Q9Y6M9 179 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms