RNA–Protein interactions for RNA: ENST00000475141.2

FRMD4A-204, Transcript of FERM domain containing 4A, humanhuman

TSL 1 (best) BASIC

Gene FRMD4A, Length 1,233 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRMD4A-204ENST00000475141 CFAP65Q6ZU64 1925 aaKnown RBP20.68■□□□□ 0.9
FRMD4A-204ENST00000475141 E9PCH4 1651 aa20.67■□□□□ 0.9
FRMD4A-204ENST00000475141 MPHOSPH9Q99550 1183 aa20.67■□□□□ 0.9
FRMD4A-204ENST00000475141 CPS1P31327 1500 aa20.67■□□□□ 0.9
FRMD4A-204ENST00000475141 NLRP1Q9C000 1473 aa20.66■□□□□ 0.9
FRMD4A-204ENST00000475141 NPHP4O75161 1426 aaPredicted RBP20.65■□□□□ 0.9
FRMD4A-204ENST00000475141 U3KPZ7 1027 aaPredicted RBP20.65■□□□□ 0.9
FRMD4A-204ENST00000475141 ERVK-7P63135 1459 aa20.62■□□□□ 0.89
FRMD4A-204ENST00000475141 SPHKAPQ2M3C7 1700 aa20.6■□□□□ 0.89
FRMD4A-204ENST00000475141 MED14O60244 1454 aa20.6■□□□□ 0.89
FRMD4A-204ENST00000475141 IQGAP1P46940 1657 aa20.6■□□□□ 0.89
FRMD4A-204ENST00000475141 SLC4A2P04920 1241 aa20.59■□□□□ 0.89
FRMD4A-204ENST00000475141 STRCP1A6NGW2 1772 aa20.58■□□□□ 0.89
FRMD4A-204ENST00000475141 MED1Q15648 1581 aaPredicted RBP20.58■□□□□ 0.88
FRMD4A-204ENST00000475141 NOS1P29475 1434 aa20.56■□□□□ 0.88
FRMD4A-204ENST00000475141 DHX57Q6P158 1386 aaKnown RBP20.56■□□□□ 0.88
FRMD4A-204ENST00000475141 TRPM2O94759 1503 aa20.55■□□□□ 0.88
FRMD4A-204ENST00000475141 ALKQ9UM73 1620 aa20.55■□□□□ 0.88
FRMD4A-204ENST00000475141 SYNMO15061 1565 aa20.54■□□□□ 0.88
FRMD4A-204ENST00000475141 UBR1Q8IWV7 1749 aa20.53■□□□□ 0.88
FRMD4A-204ENST00000475141 LRRC7Q96NW7 1537 aa20.53■□□□□ 0.88
FRMD4A-204ENST00000475141 LTKP29376 864 aa20.51■□□□□ 0.87
FRMD4A-204ENST00000475141 TXNDC2Q86VQ3 553 aa20.51■□□□□ 0.87
FRMD4A-204ENST00000475141 SLC52A1Q9NWF4 448 aa20.5■□□□□ 0.87
FRMD4A-204ENST00000475141 CCDC144AA2RUR9 1427 aa20.5■□□□□ 0.87
FRMD4A-204ENST00000475141 PIK3C2BO00750 1634 aa20.49■□□□□ 0.87
FRMD4A-204ENST00000475141 CLTCL1P53675 1640 aa20.47■□□□□ 0.87
FRMD4A-204ENST00000475141 SCAF11Q99590 1463 aaKnown RBP20.47■□□□□ 0.87
FRMD4A-204ENST00000475141 ANKRD30BQ9BXX2 1392 aa20.46■□□□□ 0.87
FRMD4A-204ENST00000475141 CCER1Q8TC90 406 aaPredicted RBP20.44■□□□□ 0.86
FRMD4A-204ENST00000475141 STAG3Q9UJ98 1225 aa20.44■□□□□ 0.86
FRMD4A-204ENST00000475141 EID1Q9Y6B2 187 aa20.44■□□□□ 0.86
FRMD4A-204ENST00000475141 KIF1BO60333 1816 aa20.43■□□□□ 0.86
FRMD4A-204ENST00000475141 IDI1Q13907 227 aa20.43■□□□□ 0.86
FRMD4A-204ENST00000475141 ADGRB3O60242 1522 aa20.43■□□□□ 0.86
FRMD4A-204ENST00000475141 KDM5AP29375 1690 aaKnown RBP20.42■□□□□ 0.86
FRMD4A-204ENST00000475141 ARHGAP23Q9P227 1491 aa20.42■□□□□ 0.86
FRMD4A-204ENST00000475141 CHGAP10645 457 aaKnown RBP20.41■□□□□ 0.86
FRMD4A-204ENST00000475141 SLIT1O75093 1534 aa20.41■□□□□ 0.86
FRMD4A-204ENST00000475141 XIRP1Q702N8 1843 aaKnown RBP20.4■□□□□ 0.86
FRMD4A-204ENST00000475141 CLSPNQ9HAW4 1339 aa20.39■□□□□ 0.85
FRMD4A-204ENST00000475141 CAPN15O75808 1086 aa20.38■□□□□ 0.85
FRMD4A-204ENST00000475141 TMEM131LA2VDJ0 1609 aa20.38■□□□□ 0.85
FRMD4A-204ENST00000475141 TMEM2Q9UHN6 1383 aa20.37■□□□□ 0.85
FRMD4A-204ENST00000475141 RBM33Q96EV2 1170 aaKnown RBP20.37■□□□□ 0.85
FRMD4A-204ENST00000475141 SLC26A8Q96RN1 970 aa20.36■□□□□ 0.85
FRMD4A-204ENST00000475141 MYO5BQ9ULV0 1848 aa20.35■□□□□ 0.85
FRMD4A-204ENST00000475141 ZNF326Q5BKZ1 582 aaKnown RBP20.33■□□□□ 0.85
FRMD4A-204ENST00000475141 SPATA31E1Q6ZUB1 1445 aa20.31■□□□□ 0.84
FRMD4A-204ENST00000475141 NEUROD1Q13562 356 aa20.31■□□□□ 0.84
FRMD4A-204ENST00000475141 PROSER2Q86WR7 435 aaPredicted RBP20.31■□□□□ 0.84
FRMD4A-204ENST00000475141 BCANQ96GW7 911 aa20.31■□□□□ 0.84
FRMD4A-204ENST00000475141 RGS17Q9UGC6 210 aaPredicted RBP20.31■□□□□ 0.84
FRMD4A-204ENST00000475141 TMEM94Q12767 1356 aa20.31■□□□□ 0.84
FRMD4A-204ENST00000475141 KCNA6P17658 529 aa20.3■□□□□ 0.84
FRMD4A-204ENST00000475141 SIN3AQ96ST3 1273 aa20.3■□□□□ 0.84
FRMD4A-204ENST00000475141 RGL3Q3MIN7 710 aa20.29■□□□□ 0.84
FRMD4A-204ENST00000475141 SPINK5Q9NQ38 1064 aaPredicted RBP20.28■□□□□ 0.84
FRMD4A-204ENST00000475141 HDGFP51858 240 aaKnown RBP20.27■□□□□ 0.84
FRMD4A-204ENST00000475141 RIMS2Q9UQ26 1411 aa20.27■□□□□ 0.83
FRMD4A-204ENST00000475141 RPGRIP1LQ68CZ1 1315 aa20.27■□□□□ 0.83
FRMD4A-204ENST00000475141 FAM135BQ49AJ0 1406 aa20.26■□□□□ 0.83
FRMD4A-204ENST00000475141 TONSLQ96HA7 1378 aa20.25■□□□□ 0.83
FRMD4A-204ENST00000475141 PPP1R15AO75807 674 aaPredicted RBP20.25■□□□□ 0.83
FRMD4A-204ENST00000475141 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.25■□□□□ 0.83
FRMD4A-204ENST00000475141 NEXMIFQ5QGS0 1516 aa20.25■□□□□ 0.83
FRMD4A-204ENST00000475141 PPLO60437 1756 aa20.24■□□□□ 0.83
FRMD4A-204ENST00000475141 ZFYVE9O95405 1425 aa20.24■□□□□ 0.83
FRMD4A-204ENST00000475141 IFT172Q9UG01 1749 aa20.23■□□□□ 0.83
FRMD4A-204ENST00000475141 ROBO1Q9Y6N7 1651 aa20.22■□□□□ 0.83
FRMD4A-204ENST00000475141 SAMD1Q6SPF0 538 aaPredicted RBP20.22■□□□□ 0.83
FRMD4A-204ENST00000475141 VGFO15240 615 aaPredicted RBP20.2■□□□□ 0.82
FRMD4A-204ENST00000475141 MYOM2P54296 1465 aa20.19■□□□□ 0.82
FRMD4A-204ENST00000475141 POTEAQ6S8J7 498 aa20.19■□□□□ 0.82
FRMD4A-204ENST00000475141 DCAF11Q8TEB1 546 aa20.19■□□□□ 0.82
FRMD4A-204ENST00000475141 NUTM2DQ5VT03 806 aaPredicted RBP20.18■□□□□ 0.82
FRMD4A-204ENST00000475141 STAC3Q96MF2 364 aa20.18■□□□□ 0.82
FRMD4A-204ENST00000475141 MSH6P52701 1360 aa20.17■□□□□ 0.82
FRMD4A-204ENST00000475141 L3MBTL2Q969R5 705 aa20.16■□□□□ 0.82
FRMD4A-204ENST00000475141 SLAIN2Q9P270 581 aa20.16■□□□□ 0.82
FRMD4A-204ENST00000475141 MYCNP04198 464 aaPredicted RBP20.15■□□□□ 0.82
FRMD4A-204ENST00000475141 TIMELESSQ9UNS1 1208 aa20.15■□□□□ 0.82
FRMD4A-204ENST00000475141 KDM2AQ9Y2K7 1162 aa20.15■□□□□ 0.82
FRMD4A-204ENST00000475141 PLEKHG1Q9ULL1 1385 aa20.15■□□□□ 0.82
FRMD4A-204ENST00000475141 NKTRP30414 1462 aaKnown RBP20.15■□□□□ 0.82
FRMD4A-204ENST00000475141 NWD1Q149M9 1564 aa20.15■□□□□ 0.82
FRMD4A-204ENST00000475141 CHD2O14647 1828 aaKnown RBP20.13■□□□□ 0.81
FRMD4A-204ENST00000475141 PHLPP1O60346 1717 aa20.13■□□□□ 0.81
FRMD4A-204ENST00000475141 C14orf37Q86TY3 774 aa20.12■□□□□ 0.81
FRMD4A-204ENST00000475141 SETBP1Q9Y6X0 1596 aa20.12■□□□□ 0.81
FRMD4A-204ENST00000475141 FOXD4L1Q9NU39 408 aa20.11■□□□□ 0.81
FRMD4A-204ENST00000475141 NRXN1Q9ULB1 1477 aa20.11■□□□□ 0.81
FRMD4A-204ENST00000475141 PIK3C2GO75747 1445 aa20.1■□□□□ 0.81
FRMD4A-204ENST00000475141 ADGRF5Q8IZF2 1346 aa20.1■□□□□ 0.81
FRMD4A-204ENST00000475141 DIP2AQ14689 1571 aa20.09■□□□□ 0.81
FRMD4A-204ENST00000475141 TBX22Q9Y458 520 aa20.09■□□□□ 0.81
FRMD4A-204ENST00000475141 LAMC1P11047 1609 aa20.09■□□□□ 0.81
FRMD4A-204ENST00000475141 NRXN3Q9Y4C0 1643 aa20.07■□□□□ 0.8
FRMD4A-204ENST00000475141 ZNF219Q9P2Y4 722 aaPredicted RBP20.07■□□□□ 0.8
FRMD4A-204ENST00000475141 PRAG1Q86YV5 1406 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms