RNA–Protein interactions for RNA: ENST00000474852.1

TPR-205, Transcript of translocated promoter region, nuclear basket protein, humanhuman

TSL 1 (best)

Gene TPR, Length 2,757 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-205ENST00000474852 PREX2Q70Z35 1606 aa21.23■□□□□ 0.99
TPR-205ENST00000474852 FRAT2O75474 233 aaPredicted RBP21.23■□□□□ 0.99
TPR-205ENST00000474852 ZNF521Q96K83 1311 aa21.23■□□□□ 0.99
TPR-205ENST00000474852 LAMC1P11047 1609 aa21.22■□□□□ 0.99
TPR-205ENST00000474852 APAF1O14727 1248 aa21.22■□□□□ 0.99
TPR-205ENST00000474852 EIF2AK4Q9P2K8 1649 aaKnown RBP21.22■□□□□ 0.99
TPR-205ENST00000474852 SLFN5Q08AF3 891 aa21.21■□□□□ 0.99
TPR-205ENST00000474852 UNC13BO14795 1591 aa21.21■□□□□ 0.99
TPR-205ENST00000474852 EIF5BO60841 1220 aaKnown RBP21.17■□□□□ 0.98
TPR-205ENST00000474852 TTC37Q6PGP7 1564 aa21.17■□□□□ 0.98
TPR-205ENST00000474852 DMRT2Q9Y5R5 561 aa21.16■□□□□ 0.98
TPR-205ENST00000474852 IQGAP3Q86VI3 1631 aa21.16■□□□□ 0.98
TPR-205ENST00000474852 IGHDP01880 384 aa21.15■□□□□ 0.98
TPR-205ENST00000474852 UBE2Q2Q8WVN8 375 aa21.15■□□□□ 0.98
TPR-205ENST00000474852 RNF17Q9BXT8 1623 aaKnown RBP21.12■□□□□ 0.97
TPR-205ENST00000474852 CANXP27824 592 aaKnown RBP21.12■□□□□ 0.97
TPR-205ENST00000474852 CDCA8Q53HL2 280 aa21.12■□□□□ 0.97
TPR-205ENST00000474852 ASXL1Q8IXJ9 1541 aa21.11■□□□□ 0.97
TPR-205ENST00000474852 NKTRP30414 1462 aaKnown RBP21.11■□□□□ 0.97
TPR-205ENST00000474852 PANK1Q8TE04 598 aa21.1■□□□□ 0.97
TPR-205ENST00000474852 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.1■□□□□ 0.97
TPR-205ENST00000474852 COG6Q9Y2V7 657 aa21.1■□□□□ 0.97
TPR-205ENST00000474852 SEC24BO95487 1268 aa21.09■□□□□ 0.97
TPR-205ENST00000474852 NEUROD2Q15784 382 aa21.09■□□□□ 0.97
TPR-205ENST00000474852 TRMT2AQ8IZ69 625 aaKnown RBP21.09■□□□□ 0.97
TPR-205ENST00000474852 MAST1Q9Y2H9 1570 aa21.09■□□□□ 0.97
TPR-205ENST00000474852 PIK3C2GO75747 1445 aa21.08■□□□□ 0.96
TPR-205ENST00000474852 EIF3AQ14152 1382 aaKnown RBP21.08■□□□□ 0.96
TPR-205ENST00000474852 DUOX2Q9NRD8 1548 aa21.07■□□□□ 0.96
TPR-205ENST00000474852 ATP10AO60312 1499 aa21.07■□□□□ 0.96
TPR-205ENST00000474852 MADDQ8WXG6 1647 aa21.07■□□□□ 0.96
TPR-205ENST00000474852 E9PSI1 815 aa21.07■□□□□ 0.96
TPR-205ENST00000474852 SLKQ9H2G2 1235 aaPredicted RBP21.07■□□□□ 0.96
TPR-205ENST00000474852 SCAF11Q99590 1463 aaKnown RBP21.06■□□□□ 0.96
TPR-205ENST00000474852 SYNMO15061 1565 aa21.06■□□□□ 0.96
TPR-205ENST00000474852 PLXNC1O60486 1568 aa21.06■□□□□ 0.96
TPR-205ENST00000474852 IQGAP1P46940 1657 aa21.05■□□□□ 0.96
TPR-205ENST00000474852 TNNT2P45379 298 aaPredicted RBP21.05■□□□□ 0.96
TPR-205ENST00000474852 USP19O94966 1318 aa21.05■□□□□ 0.96
TPR-205ENST00000474852 RRP7AQ9Y3A4 280 aaKnown RBP21.04■□□□□ 0.96
TPR-205ENST00000474852 CENPJQ9HC77 1338 aaPredicted RBP21.04■□□□□ 0.96
TPR-205ENST00000474852 CLUAP1Q96AJ1 413 aa21.03■□□□□ 0.96
TPR-205ENST00000474852 CLASP1Q7Z460 1538 aa21.03■□□□□ 0.96
TPR-205ENST00000474852 CFAP70Q5T0N1 1121 aa21.02■□□□□ 0.95
TPR-205ENST00000474852 CARD14Q9BXL6 1004 aa21.02■□□□□ 0.95
TPR-205ENST00000474852 MYOM1P52179 1685 aa21.01■□□□□ 0.95
TPR-205ENST00000474852 BCL2L13Q9BXK5 485 aa21.01■□□□□ 0.95
TPR-205ENST00000474852 POGKQ9P215 609 aa21.01■□□□□ 0.95
TPR-205ENST00000474852 CGNL1Q0VF96 1302 aa21.01■□□□□ 0.95
TPR-205ENST00000474852 AFAP1Q8N556 730 aa21■□□□□ 0.95
TPR-205ENST00000474852 WWC1Q8IX03 1113 aa20.99■□□□□ 0.95
TPR-205ENST00000474852 TRAPPC8Q9Y2L5 1435 aa20.99■□□□□ 0.95
TPR-205ENST00000474852 TNNQ9UQP3 1299 aa20.99■□□□□ 0.95
TPR-205ENST00000474852 ABCC2Q92887 1545 aa20.99■□□□□ 0.95
TPR-205ENST00000474852 EFCAB2Q5VUJ9 269 aa20.97■□□□□ 0.95
TPR-205ENST00000474852 ARXQ96QS3 562 aa20.97■□□□□ 0.95
TPR-205ENST00000474852 PDE3AQ14432 1141 aa20.97■□□□□ 0.95
TPR-205ENST00000474852 SPAG9O60271 1321 aaKnown RBP20.96■□□□□ 0.95
TPR-205ENST00000474852 NPC1L1Q9UHC9 1359 aa20.95■□□□□ 0.94
TPR-205ENST00000474852 MAPK8IP3Q9UPT6 1336 aa20.95■□□□□ 0.94
TPR-205ENST00000474852 SPHKAPQ2M3C7 1700 aa20.95■□□□□ 0.94
TPR-205ENST00000474852 KDM5AP29375 1690 aaKnown RBP20.94■□□□□ 0.94
TPR-205ENST00000474852 BECN1Q14457 450 aa20.94■□□□□ 0.94
TPR-205ENST00000474852 CLTCL1P53675 1640 aa20.94■□□□□ 0.94
TPR-205ENST00000474852 SPRYD3Q8NCJ5 442 aa20.94■□□□□ 0.94
TPR-205ENST00000474852 SCAPERQ9BY12 1400 aa20.93■□□□□ 0.94
TPR-205ENST00000474852 RLBP1P12271 317 aa20.93■□□□□ 0.94
TPR-205ENST00000474852 PCDHB15Q9Y5E8 787 aa20.92■□□□□ 0.94
TPR-205ENST00000474852 ADGRF5Q8IZF2 1346 aa20.92■□□□□ 0.94
TPR-205ENST00000474852 TRPM2O94759 1503 aa20.92■□□□□ 0.94
TPR-205ENST00000474852 VIRMAQ69YN4 1812 aaKnown RBP20.91■□□□□ 0.94
TPR-205ENST00000474852 ERVK-7P63135 1459 aa20.91■□□□□ 0.94
TPR-205ENST00000474852 PLCH2O75038 1416 aa20.9■□□□□ 0.94
TPR-205ENST00000474852 ERCC6L2Q5T890 1561 aa20.9■□□□□ 0.94
TPR-205ENST00000474852 RARSP54136 660 aaKnown RBP20.9■□□□□ 0.94
TPR-205ENST00000474852 CEP152O94986 1710 aa20.89■□□□□ 0.94
TPR-205ENST00000474852 MORC1Q86VD1 984 aa20.89■□□□□ 0.93
TPR-205ENST00000474852 TCP11L2Q8N4U5 519 aa20.89■□□□□ 0.93
TPR-205ENST00000474852 KIF3BO15066 747 aa20.88■□□□□ 0.93
TPR-205ENST00000474852 UPF2Q9HAU5 1272 aaKnown RBP20.88■□□□□ 0.93
TPR-205ENST00000474852 PDZRN3Q9UPQ7 1066 aa20.88■□□□□ 0.93
TPR-205ENST00000474852 UGGT1Q9NYU2 1555 aa20.88■□□□□ 0.93
TPR-205ENST00000474852 NLRP1Q9C000 1473 aa20.87■□□□□ 0.93
TPR-205ENST00000474852 PMFBP1Q8TBY8 1022 aa20.86■□□□□ 0.93
TPR-205ENST00000474852 CHGAP10645 457 aaKnown RBP20.85■□□□□ 0.93
TPR-205ENST00000474852 ABCC1P33527 1531 aa20.85■□□□□ 0.93
TPR-205ENST00000474852 PTPRTO14522 1441 aa20.85■□□□□ 0.93
TPR-205ENST00000474852 SLC12A5Q9H2X9 1139 aa20.85■□□□□ 0.93
TPR-205ENST00000474852 STAC3Q96MF2 364 aa20.85■□□□□ 0.93
TPR-205ENST00000474852 TBC1D2Q9BYX2 928 aa20.85■□□□□ 0.93
TPR-205ENST00000474852 NINLQ9Y2I6 1382 aa20.84■□□□□ 0.93
TPR-205ENST00000474852 TRAK1Q9UPV9 953 aa20.84■□□□□ 0.93
TPR-205ENST00000474852 NSD3Q9BZ95 1437 aa20.84■□□□□ 0.93
TPR-205ENST00000474852 NGEFQ8N5V2 710 aa20.84■□□□□ 0.93
TPR-205ENST00000474852 RUNDC1Q96C34 613 aa20.84■□□□□ 0.93
TPR-205ENST00000474852 POLR3AO14802 1390 aaPredicted RBP20.83■□□□□ 0.93
TPR-205ENST00000474852 FAM43AQ8N2R8 423 aa20.83■□□□□ 0.92
TPR-205ENST00000474852 ANTXR1Q9H6X2 564 aa20.83■□□□□ 0.92
TPR-205ENST00000474852 TBC1D32Q96NH3 1257 aa20.82■□□□□ 0.92
TPR-205ENST00000474852 GZF1Q9H116 711 aaPredicted RBP20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms