RNA–Protein interactions for RNA: ENST00000474684.1

CPSF7-210, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 635 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-210ENST00000474684 ZNF335Q9H4Z2 1342 aaPredicted RBP9.34□□□□□ -0.91
CPSF7-210ENST00000474684 RSPH4AQ5TD94 716 aa9.34□□□□□ -0.91
CPSF7-210ENST00000474684 GCC2Q8IWJ2 1684 aa9.34□□□□□ -0.91
CPSF7-210ENST00000474684 EFCAB6Q5THR3 1501 aa9.34□□□□□ -0.91
CPSF7-210ENST00000474684 ADGRL2O95490 1459 aa9.34□□□□□ -0.91
CPSF7-210ENST00000474684 UNC13BO14795 1591 aa9.33□□□□□ -0.92
CPSF7-210ENST00000474684 TSPY4P0CV99 314 aa9.33□□□□□ -0.92
CPSF7-210ENST00000474684 TSPY10P0CW01 314 aa9.33□□□□□ -0.92
CPSF7-210ENST00000474684 SSUH2Q9Y2M2 353 aa9.33□□□□□ -0.92
CPSF7-210ENST00000474684 ALKQ9UM73 1620 aa9.33□□□□□ -0.92
CPSF7-210ENST00000474684 TET3O43151 1660 aa9.32□□□□□ -0.92
CPSF7-210ENST00000474684 WASHC2CQ9Y4E1 1318 aa9.32□□□□□ -0.92
CPSF7-210ENST00000474684 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.32□□□□□ -0.921e-11■■□□□ 12.1
CPSF7-210ENST00000474684 KDM5AP29375 1690 aaKnown RBP9.32□□□□□ -0.92
CPSF7-210ENST00000474684 LMTK2Q8IWU2 1503 aa9.31□□□□□ -0.92
CPSF7-210ENST00000474684 ZNF692Q9BU19 519 aaPredicted RBP9.31□□□□□ -0.92
CPSF7-210ENST00000474684 E9PCH4 1651 aa9.31□□□□□ -0.92
CPSF7-210ENST00000474684 MED14O60244 1454 aa9.3□□□□□ -0.92
CPSF7-210ENST00000474684 NPHP4O75161 1426 aaPredicted RBP9.3□□□□□ -0.92
CPSF7-210ENST00000474684 ARHGAP31Q2M1Z3 1444 aa9.3□□□□□ -0.92
CPSF7-210ENST00000474684 ADGRB3O60242 1522 aa9.29□□□□□ -0.92
CPSF7-210ENST00000474684 SLIT1O75093 1534 aa9.29□□□□□ -0.92
CPSF7-210ENST00000474684 CPS1P31327 1500 aa9.29□□□□□ -0.92
CPSF7-210ENST00000474684 ARHGAP23Q9P227 1491 aa9.28□□□□□ -0.92
CPSF7-210ENST00000474684 IQGAP3Q86VI3 1631 aa9.28□□□□□ -0.92
CPSF7-210ENST00000474684 PKD2Q13563 968 aa9.28□□□□□ -0.92
CPSF7-210ENST00000474684 RRP7BPQ9NSQ0 103 aa9.28□□□□□ -0.92
CPSF7-210ENST00000474684 CHIC2Q9UKJ5 165 aa9.27□□□□□ -0.93
CPSF7-210ENST00000474684 SCAF11Q99590 1463 aaKnown RBP9.27□□□□□ -0.93
CPSF7-210ENST00000474684 ANKRD30AQ9BXX3 1397 aa9.26□□□□□ -0.93
CPSF7-210ENST00000474684 SPHKAPQ2M3C7 1700 aa9.25□□□□□ -0.93
CPSF7-210ENST00000474684 NOS1P29475 1434 aa9.25□□□□□ -0.93
CPSF7-210ENST00000474684 PRR29P0C7W0 189 aa9.25□□□□□ -0.93
CPSF7-210ENST00000474684 TMEM131LA2VDJ0 1609 aa9.24□□□□□ -0.93
CPSF7-210ENST00000474684 ANKRD50Q9ULJ7 1429 aa9.24□□□□□ -0.93
CPSF7-210ENST00000474684 FAM50AQ14320 339 aaKnown RBP9.24□□□□□ -0.93
CPSF7-210ENST00000474684 PLSCR2Q9NRY7 297 aa9.24□□□□□ -0.93
CPSF7-210ENST00000474684 LRRC7Q96NW7 1537 aa9.24□□□□□ -0.93
CPSF7-210ENST00000474684 CHADLQ6NUI6 762 aa9.23□□□□□ -0.93
CPSF7-210ENST00000474684 CHD2O14647 1828 aaKnown RBP9.23□□□□□ -0.93
CPSF7-210ENST00000474684 NWD1Q149M9 1564 aa9.23□□□□□ -0.93
CPSF7-210ENST00000474684 KANK1Q14678 1352 aa9.22□□□□□ -0.93
CPSF7-210ENST00000474684 MED1Q15648 1581 aaPredicted RBP9.21□□□□□ -0.93
CPSF7-210ENST00000474684 ANKLE2Q86XL3 938 aa9.21□□□□□ -0.94
CPSF7-210ENST00000474684 PPARGC1BQ86YN6 1023 aaKnown RBP9.21□□□□□ -0.94
CPSF7-210ENST00000474684 THEMISQ8N1K5 641 aaPredicted RBP9.21□□□□□ -0.94
CPSF7-210ENST00000474684 RPRD2Q5VT52 1461 aaKnown RBP9.21□□□□□ -0.94
CPSF7-210ENST00000474684 UBAP1LF5GYI3 381 aa9.2□□□□□ -0.94
CPSF7-210ENST00000474684 LTKP29376 864 aa9.2□□□□□ -0.94
CPSF7-210ENST00000474684 CD44P16070 742 aaKnown RBP9.19□□□□□ -0.94
CPSF7-210ENST00000474684 DISP3Q9P2K9 1392 aa9.19□□□□□ -0.94
CPSF7-210ENST00000474684 TMEM2Q9UHN6 1383 aa9.19□□□□□ -0.94
CPSF7-210ENST00000474684 NRXN3Q9Y4C0 1643 aa9.19□□□□□ -0.94
CPSF7-210ENST00000474684 ZFYVE9O95405 1425 aa9.18□□□□□ -0.94
CPSF7-210ENST00000474684 POTEIP0CG38 1075 aa9.18□□□□□ -0.94
CPSF7-210ENST00000474684 CLTCL1P53675 1640 aa9.18□□□□□ -0.94
CPSF7-210ENST00000474684 MKRN4PQ13434 485 aaPredicted RBP9.18□□□□□ -0.94
CPSF7-210ENST00000474684 ROCK1Q13464 1354 aa9.18□□□□□ -0.94
CPSF7-210ENST00000474684 KIF1BO60333 1816 aa9.17□□□□□ -0.94
CPSF7-210ENST00000474684 ILDR2Q71H61 639 aa9.17□□□□□ -0.94
CPSF7-210ENST00000474684 ROBO1Q9Y6N7 1651 aa9.16□□□□□ -0.94
CPSF7-210ENST00000474684 RRBP1Q9P2E9 1410 aaKnown RBP9.16□□□□□ -0.94
CPSF7-210ENST00000474684 IDI1Q13907 227 aa9.16□□□□□ -0.94
CPSF7-210ENST00000474684 SETD1AO15047 1707 aaKnown RBP9.15□□□□□ -0.94
CPSF7-210ENST00000474684 XRN1Q8IZH2 1706 aaKnown RBP9.15□□□□□ -0.94
CPSF7-210ENST00000474684 ZBTB22O15209 634 aa9.15□□□□□ -0.94
CPSF7-210ENST00000474684 PIP4K2BP78356 416 aa9.15□□□□□ -0.94
CPSF7-210ENST00000474684 DCBLD2Q96PD2 775 aa9.15□□□□□ -0.94
CPSF7-210ENST00000474684 NKTRP30414 1462 aaKnown RBP9.15□□□□□ -0.95
CPSF7-210ENST00000474684 HSPA1LP34931 641 aa9.14□□□□□ -0.95
CPSF7-210ENST00000474684 ITGAEP38570 1179 aa9.14□□□□□ -0.95
CPSF7-210ENST00000474684 TXNDC2Q86VQ3 553 aa9.14□□□□□ -0.95
CPSF7-210ENST00000474684 RIMS2Q9UQ26 1411 aa9.14□□□□□ -0.95
CPSF7-210ENST00000474684 DIP2AQ14689 1571 aa9.13□□□□□ -0.95
CPSF7-210ENST00000474684 FARP1Q9Y4F1 1045 aaPredicted RBP9.13□□□□□ -0.95
CPSF7-210ENST00000474684 PPLO60437 1756 aa9.12□□□□□ -0.95
CPSF7-210ENST00000474684 TRPM2O94759 1503 aa9.12□□□□□ -0.95
CPSF7-210ENST00000474684 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.12□□□□□ -0.95
CPSF7-210ENST00000474684 STAG3Q9UJ98 1225 aa9.12□□□□□ -0.95
CPSF7-210ENST00000474684 NAIPQ13075 1403 aa9.12□□□□□ -0.95
CPSF7-210ENST00000474684 ADAMTS13Q76LX8 1427 aa9.12□□□□□ -0.95
CPSF7-210ENST00000474684 TMEM94Q12767 1356 aa9.12□□□□□ -0.95
CPSF7-210ENST00000474684 PHLPP1O60346 1717 aa9.11□□□□□ -0.95
CPSF7-210ENST00000474684 NALCNQ8IZF0 1738 aa9.11□□□□□ -0.95
CPSF7-210ENST00000474684 NEXMIFQ5QGS0 1516 aa9.11□□□□□ -0.95
CPSF7-210ENST00000474684 SLC26A8Q96RN1 970 aa9.11□□□□□ -0.95
CPSF7-210ENST00000474684 IFT172Q9UG01 1749 aa9.11□□□□□ -0.95
CPSF7-210ENST00000474684 NUP155O75694 1391 aa9.11□□□□□ -0.95
CPSF7-210ENST00000474684 PLEKHG1Q9ULL1 1385 aa9.11□□□□□ -0.95
CPSF7-210ENST00000474684 RBM33Q96EV2 1170 aaKnown RBP9.1□□□□□ -0.95
CPSF7-210ENST00000474684 EID1Q9Y6B2 187 aa9.1□□□□□ -0.95
CPSF7-210ENST00000474684 SETBP1Q9Y6X0 1596 aa9.1□□□□□ -0.95
CPSF7-210ENST00000474684 COL16A1Q07092 1604 aaPredicted RBP9.09□□□□□ -0.95
CPSF7-210ENST00000474684 TOM1O60784 492 aa9.09□□□□□ -0.95
CPSF7-210ENST00000474684 SLC52A1Q9NWF4 448 aa9.09□□□□□ -0.95
CPSF7-210ENST00000474684 NUTM2DQ5VT03 806 aaPredicted RBP9.08□□□□□ -0.96
CPSF7-210ENST00000474684 HFM1A2PYH4 1435 aa9.07□□□□□ -0.96
CPSF7-210ENST00000474684 PTPRUQ92729 1446 aa9.07□□□□□ -0.96
CPSF7-210ENST00000474684 CHGAP10645 457 aaKnown RBP9.06□□□□□ -0.96
CPSF7-210ENST00000474684 KCNA6P17658 529 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms