RNA–Protein interactions for RNA: ENST00000474413.5

EFNA1-204, Transcript of ephrin A1, humanhuman

TSL 3

Gene EFNA1, Length 1,083 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA1-204ENST00000474413 PLEKHG1Q9ULL1 1385 aa26.98■■□□□ 1.91
EFNA1-204ENST00000474413 SLC4A1APQ9BWU0 796 aaKnown RBP26.98■■□□□ 1.91
EFNA1-204ENST00000474413 LRRC7Q96NW7 1537 aa26.98■■□□□ 1.91
EFNA1-204ENST00000474413 ALKQ9UM73 1620 aa26.98■■□□□ 1.91
EFNA1-204ENST00000474413 NWD1Q149M9 1564 aa26.97■■□□□ 1.91
EFNA1-204ENST00000474413 NEXMIFQ5QGS0 1516 aa26.97■■□□□ 1.91
EFNA1-204ENST00000474413 NRXN3Q9Y4C0 1643 aa26.97■■□□□ 1.91
EFNA1-204ENST00000474413 XIRP1Q702N8 1843 aaKnown RBP26.97■■□□□ 1.91
EFNA1-204ENST00000474413 CHGAP10645 457 aaKnown RBP26.95■■□□□ 1.9
EFNA1-204ENST00000474413 FOXD1Q16676 465 aa26.95■■□□□ 1.9
EFNA1-204ENST00000474413 KIF1BO60333 1816 aa26.95■■□□□ 1.9
EFNA1-204ENST00000474413 ADAMTS13Q76LX8 1427 aa26.94■■□□□ 1.9
EFNA1-204ENST00000474413 SLC26A8Q96RN1 970 aa26.92■■□□□ 1.9
EFNA1-204ENST00000474413 NUTM2DQ5VT03 806 aaPredicted RBP26.9■■□□□ 1.9
EFNA1-204ENST00000474413 MPHOSPH9Q99550 1183 aa26.9■■□□□ 1.9
EFNA1-204ENST00000474413 DIP2AQ14689 1571 aa26.89■■□□□ 1.9
EFNA1-204ENST00000474413 SETBP1Q9Y6X0 1596 aa26.89■■□□□ 1.9
EFNA1-204ENST00000474413 SENP3Q9H4L4 574 aaPredicted RBP26.89■■□□□ 1.9
EFNA1-204ENST00000474413 CHD2O14647 1828 aaKnown RBP26.87■■□□□ 1.89
EFNA1-204ENST00000474413 PPLO60437 1756 aa26.84■■□□□ 1.89
EFNA1-204ENST00000474413 PPP1R15AO75807 674 aaPredicted RBP26.84■■□□□ 1.89
EFNA1-204ENST00000474413 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.84■■□□□ 1.89
EFNA1-204ENST00000474413 NKTRP30414 1462 aaKnown RBP26.84■■□□□ 1.89
EFNA1-204ENST00000474413 SPATA31E1Q6ZUB1 1445 aa26.82■■□□□ 1.88
EFNA1-204ENST00000474413 SETD1AO15047 1707 aaKnown RBP26.82■■□□□ 1.88
EFNA1-204ENST00000474413 IFT172Q9UG01 1749 aa26.82■■□□□ 1.88
EFNA1-204ENST00000474413 KCNA6P17658 529 aa26.79■■□□□ 1.88
EFNA1-204ENST00000474413 CCDC144AA2RUR9 1427 aa26.79■■□□□ 1.88
EFNA1-204ENST00000474413 XRN1Q8IZH2 1706 aaKnown RBP26.79■■□□□ 1.88
EFNA1-204ENST00000474413 UBAP1LF5GYI3 381 aa26.78■■□□□ 1.88
EFNA1-204ENST00000474413 PTPRUQ92729 1446 aa26.78■■□□□ 1.88
EFNA1-204ENST00000474413 HDGFP51858 240 aaKnown RBP26.77■■□□□ 1.88
EFNA1-204ENST00000474413 ZNF326Q5BKZ1 582 aaKnown RBP26.77■■□□□ 1.88
EFNA1-204ENST00000474413 TBX22Q9Y458 520 aa26.77■■□□□ 1.88
EFNA1-204ENST00000474413 TMEM94Q12767 1356 aa26.75■■□□□ 1.87
EFNA1-204ENST00000474413 ACIN1Q9UKV3 1341 aaKnown RBP26.74■■□□□ 1.87
EFNA1-204ENST00000474413 BCANQ96GW7 911 aa26.74■■□□□ 1.87
EFNA1-204ENST00000474413 PIK3R4Q99570 1358 aa26.72■■□□□ 1.87
EFNA1-204ENST00000474413 METP08581 1390 aa26.71■■□□□ 1.87
EFNA1-204ENST00000474413 HRCP23327 699 aa26.7■■□□□ 1.86
EFNA1-204ENST00000474413 RBM33Q96EV2 1170 aaKnown RBP26.7■■□□□ 1.86
EFNA1-204ENST00000474413 ANKRD30BQ9BXX2 1392 aa26.7■■□□□ 1.86
EFNA1-204ENST00000474413 RPGRIP1LQ68CZ1 1315 aa26.66■■□□□ 1.86
EFNA1-204ENST00000474413 PROSER2Q86WR7 435 aaPredicted RBP26.63■■□□□ 1.85
EFNA1-204ENST00000474413 ASXL1Q8IXJ9 1541 aa26.63■■□□□ 1.85
EFNA1-204ENST00000474413 TOM1O60784 492 aa26.62■■□□□ 1.85
EFNA1-204ENST00000474413 PIP4K2BP78356 416 aa26.62■■□□□ 1.85
EFNA1-204ENST00000474413 ADGRF5Q8IZF2 1346 aa26.62■■□□□ 1.85
EFNA1-204ENST00000474413 PRAG1Q86YV5 1406 aa26.6■■□□□ 1.85
EFNA1-204ENST00000474413 NRXN1Q9ULB1 1477 aa26.6■■□□□ 1.85
EFNA1-204ENST00000474413 PIK3C2GO75747 1445 aa26.59■■□□□ 1.85
EFNA1-204ENST00000474413 VGFO15240 615 aaPredicted RBP26.58■■□□□ 1.85
EFNA1-204ENST00000474413 RGL3Q3MIN7 710 aa26.58■■□□□ 1.85
EFNA1-204ENST00000474413 AMOTL2Q9Y2J4 779 aa26.58■■□□□ 1.85
EFNA1-204ENST00000474413 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.58■■□□□ 1.85
EFNA1-204ENST00000474413 MYOM2P54296 1465 aa26.57■■□□□ 1.84
EFNA1-204ENST00000474413 NCOA3Q9Y6Q9 1424 aa26.56■■□□□ 1.84
EFNA1-204ENST00000474413 NALCNQ8IZF0 1738 aa26.56■■□□□ 1.84
EFNA1-204ENST00000474413 SCAF1Q9H7N4 1312 aaKnown RBP26.55■■□□□ 1.84
EFNA1-204ENST00000474413 ROBO1Q9Y6N7 1651 aa26.54■■□□□ 1.84
EFNA1-204ENST00000474413 PTCH1Q13635 1447 aa26.54■■□□□ 1.84
EFNA1-204ENST00000474413 HSPA1LP34931 641 aa26.53■■□□□ 1.84
EFNA1-204ENST00000474413 MSH6P52701 1360 aa26.53■■□□□ 1.84
EFNA1-204ENST00000474413 ROBO2Q9HCK4 1378 aa26.5■■□□□ 1.83
EFNA1-204ENST00000474413 FAM135BQ49AJ0 1406 aa26.49■■□□□ 1.83
EFNA1-204ENST00000474413 KNDC1Q76NI1 1749 aa26.48■■□□□ 1.83
EFNA1-204ENST00000474413 LAMC1P11047 1609 aa26.47■■□□□ 1.83
EFNA1-204ENST00000474413 ADGRL3Q9HAR2 1447 aa26.47■■□□□ 1.83
EFNA1-204ENST00000474413 DCCP43146 1447 aa26.46■■□□□ 1.83
EFNA1-204ENST00000474413 DHX57Q6P158 1386 aaKnown RBP26.46■■□□□ 1.83
EFNA1-204ENST00000474413 TECPR2O15040 1411 aa26.45■■□□□ 1.82
EFNA1-204ENST00000474413 C19orf44Q9H6X5 657 aa26.41■■□□□ 1.82
EFNA1-204ENST00000474413 ADGRB1O14514 1584 aa26.41■■□□□ 1.82
EFNA1-204ENST00000474413 LRPPRCP42704 1394 aaKnown RBP26.4■■□□□ 1.82
EFNA1-204ENST00000474413 MST1RQ04912 1400 aa26.39■■□□□ 1.82
EFNA1-204ENST00000474413 SLAIN2Q9P270 581 aa26.39■■□□□ 1.82
EFNA1-204ENST00000474413 TMEM132EQ6IEE7 984 aa26.37■■□□□ 1.81
EFNA1-204ENST00000474413 C14orf37Q86TY3 774 aa26.37■■□□□ 1.81
EFNA1-204ENST00000474413 YTHDC2Q9H6S0 1430 aaKnown RBP26.37■■□□□ 1.81
EFNA1-204ENST00000474413 COL16A1Q07092 1604 aaPredicted RBP26.36■■□□□ 1.81
EFNA1-204ENST00000474413 C14orf93Q9H972 538 aaKnown RBP26.36■■□□□ 1.81
EFNA1-204ENST00000474413 MED1Q15648 1581 aaPredicted RBP26.36■■□□□ 1.81
EFNA1-204ENST00000474413 CFAP70Q5T0N1 1121 aa26.35■■□□□ 1.81
EFNA1-204ENST00000474413 ABCC11Q96J66 1382 aa26.34■■□□□ 1.81
EFNA1-204ENST00000474413 PLEKHH1Q9ULM0 1364 aa26.34■■□□□ 1.81
EFNA1-204ENST00000474413 CDC42BPGQ6DT37 1551 aa26.34■■□□□ 1.81
EFNA1-204ENST00000474413 CADPS2Q86UW7 1296 aa26.34■■□□□ 1.81
EFNA1-204ENST00000474413 AHDC1Q5TGY3 1603 aaPredicted RBP26.34■■□□□ 1.81
EFNA1-204ENST00000474413 PHLPP1O60346 1717 aa26.34■■□□□ 1.81
EFNA1-204ENST00000474413 TRIM26Q12899 539 aaPredicted RBP26.33■■□□□ 1.81
EFNA1-204ENST00000474413 NHSL1Q5SYE7 1610 aa26.3■■□□□ 1.8
EFNA1-204ENST00000474413 ATF3P18847 181 aa26.3■■□□□ 1.8
EFNA1-204ENST00000474413 DCAF11Q8TEB1 546 aa26.3■■□□□ 1.8
EFNA1-204ENST00000474413 STK26Q9P289 416 aa26.29■■□□□ 1.8
EFNA1-204ENST00000474413 DLC1Q96QB1 1528 aa26.28■■□□□ 1.8
EFNA1-204ENST00000474413 BRINP3Q76B58 766 aa26.27■■□□□ 1.8
EFNA1-204ENST00000474413 KDM2AQ9Y2K7 1162 aa26.27■■□□□ 1.8
EFNA1-204ENST00000474413 C1orf167Q5SNV9 1468 aa26.27■■□□□ 1.8
EFNA1-204ENST00000474413 WAPLQ7Z5K2 1190 aa26.26■■□□□ 1.79
EFNA1-204ENST00000474413 FMN2Q9NZ56 1722 aa26.23■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms