RNA–Protein interactions for RNA: ENST00000474319.1

LSS-208, Transcript of lanosterol synthase, human

TSL 2

Gene LSS, Length 3,601 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LSS-208	ENST00000474319	SPINK5	Q9NQ38	1064 aa	Predicted RBP	14.02	□□□□□ -0.17
LSS-208	ENST00000474319	STK26	Q9P289	416 aa		14.01	□□□□□ -0.17
LSS-208	ENST00000474319	RALGAPB	Q86X10	1494 aa		14.01	□□□□□ -0.17
LSS-208	ENST00000474319	SHROOM2	Q13796	1616 aa		14.01	□□□□□ -0.17
LSS-208	ENST00000474319	PPP2R1A	P30153	589 aa		14	□□□□□ -0.17
LSS-208	ENST00000474319	CLUAP1	Q96AJ1	413 aa		13.99	□□□□□ -0.17
LSS-208	ENST00000474319	PDE3B	Q13370	1112 aa		13.99	□□□□□ -0.17
LSS-208	ENST00000474319	SLK	Q9H2G2	1235 aa	Predicted RBP	13.99	□□□□□ -0.17
LSS-208	ENST00000474319	GOLGA2	Q08379	1002 aa		13.98	□□□□□ -0.17
LSS-208	ENST00000474319	DMRT2	Q9Y5R5	561 aa		13.98	□□□□□ -0.17
LSS-208	ENST00000474319	FBXO31	Q5XUX0	539 aa	Predicted RBP	13.98	□□□□□ -0.17
LSS-208	ENST00000474319	TMEM132E	Q6IEE7	984 aa		13.98	□□□□□ -0.17
LSS-208	ENST00000474319	PARD3	Q8TEW0	1356 aa		13.98	□□□□□ -0.17
LSS-208	ENST00000474319	PLEKHH1	Q9ULM0	1364 aa		13.98	□□□□□ -0.17
LSS-208	ENST00000474319	NFKBIB	Q15653	356 aa		13.98	□□□□□ -0.17
LSS-208	ENST00000474319	PANK1	Q8TE04	598 aa		13.97	□□□□□ -0.17
LSS-208	ENST00000474319	COG6	Q9Y2V7	657 aa		13.97	□□□□□ -0.17
LSS-208	ENST00000474319	FRAT2	O75474	233 aa	Predicted RBP	13.96	□□□□□ -0.17
LSS-208	ENST00000474319	CDC42BPB	Q9Y5S2	1711 aa		13.96	□□□□□ -0.17
LSS-208	ENST00000474319	CFAP70	Q5T0N1	1121 aa		13.96	□□□□□ -0.17
LSS-208	ENST00000474319	TRAK1	Q9UPV9	953 aa		13.96	□□□□□ -0.18
LSS-208	ENST00000474319	ERBIN	Q96RT1	1412 aa		13.95	□□□□□ -0.18
LSS-208	ENST00000474319	DUSP27	Q5VZP5	1158 aa		13.95	□□□□□ -0.18
LSS-208	ENST00000474319	PRAG1	Q86YV5	1406 aa		13.95	□□□□□ -0.18
LSS-208	ENST00000474319	PPM1G	O15355	546 aa	Predicted RBP	13.94	□□□□□ -0.18
LSS-208	ENST00000474319	UHRF1BP1L	A0JNW5	1464 aa		13.94	□□□□□ -0.18
LSS-208	ENST00000474319	CFAP65	Q6ZU64	1925 aa	Known RBP	13.94	□□□□□ -0.18
LSS-208	ENST00000474319	TNN	Q9UQP3	1299 aa		13.93	□□□□□ -0.18
LSS-208	ENST00000474319	UHRF1BP1	Q6BDS2	1440 aa		13.93	□□□□□ -0.18
LSS-208	ENST00000474319	MS4A1	P11836	297 aa		13.92	□□□□□ -0.18
LSS-208	ENST00000474319	DDRGK1	Q96HY6	314 aa		13.92	□□□□□ -0.18
LSS-208	ENST00000474319	FAM135A	Q9P2D6	1515 aa		13.91	□□□□□ -0.18
LSS-208	ENST00000474319	PREX2	Q70Z35	1606 aa		13.91	□□□□□ -0.18
LSS-208	ENST00000474319	MYO5C	Q9NQX4	1742 aa		13.91	□□□□□ -0.18
LSS-208	ENST00000474319	IGHD	P01880	384 aa		13.91	□□□□□ -0.18
LSS-208	ENST00000474319	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	13.91	□□□□□ -0.18
LSS-208	ENST00000474319	CEBPA	P49715	358 aa	Predicted RBP	13.9	□□□□□ -0.18
LSS-208	ENST00000474319	ADGRL2	O95490	1459 aa		13.9	□□□□□ -0.18
LSS-208	ENST00000474319	A2M	P01023	1474 aa		13.9	□□□□□ -0.18
LSS-208	ENST00000474319	FAM161A	Q3B820	660 aa		13.9	□□□□□ -0.18
LSS-208	ENST00000474319	SEC24B	O95487	1268 aa		13.9	□□□□□ -0.18
LSS-208	ENST00000474319	PLEKHG5	O94827	1062 aa		13.89	□□□□□ -0.19
LSS-208	ENST00000474319	CENPQ	Q7L2Z9	268 aa	Predicted RBP	13.89	□□□□□ -0.19
LSS-208	ENST00000474319	GSE1	Q14687	1217 aa		13.89	□□□□□ -0.19
LSS-208	ENST00000474319	C8orf34	Q49A92	452 aa		13.89	□□□□□ -0.19
LSS-208	ENST00000474319	AMER1	Q5JTC6	1135 aa	Predicted RBP	13.88	□□□□□ -0.19
LSS-208	ENST00000474319	TSPOAP1	O95153	1857 aa		13.88	□□□□□ -0.19
LSS-208	ENST00000474319	YEATS2	Q9ULM3	1422 aa		13.88	□□□□□ -0.19
LSS-208	ENST00000474319	PLA2R1	Q13018	1463 aa		13.88	□□□□□ -0.19
LSS-208	ENST00000474319	ADGRF5	Q8IZF2	1346 aa		13.88	□□□□□ -0.19
LSS-208	ENST00000474319	SHANK2	Q9UPX8	1470 aa		13.86	□□□□□ -0.19
LSS-208	ENST00000474319	NUTM2F	A1L443	756 aa		13.86	□□□□□ -0.19
LSS-208	ENST00000474319	SLFN5	Q08AF3	891 aa		13.85	□□□□□ -0.19
LSS-208	ENST00000474319	GZF1	Q9H116	711 aa	Predicted RBP	13.85	□□□□□ -0.19
LSS-208	ENST00000474319	IDI1	Q13907	227 aa		13.85	□□□□□ -0.19
LSS-208	ENST00000474319	ABCC1	P33527	1531 aa		13.85	□□□□□ -0.19
LSS-208	ENST00000474319	MAGI2	Q86UL8	1455 aa		13.85	□□□□□ -0.19
LSS-208	ENST00000474319	ADGB	Q8N7X0	1667 aa		13.84	□□□□□ -0.19
LSS-208	ENST00000474319	SLC12A5	Q9H2X9	1139 aa		13.84	□□□□□ -0.19
LSS-208	ENST00000474319	KDM2B	Q8NHM5	1336 aa		13.84	□□□□□ -0.19
LSS-208	ENST00000474319	DUOX2	Q9NRD8	1548 aa		13.83	□□□□□ -0.2
LSS-208	ENST00000474319	MORC1	Q86VD1	984 aa		13.83	□□□□□ -0.2
LSS-208	ENST00000474319	ZNF518A	Q6AHZ1	1483 aa		13.83	□□□□□ -0.2
LSS-208	ENST00000474319	COL17A1	Q9UMD9	1497 aa	Predicted RBP	13.83	□□□□□ -0.2
LSS-208	ENST00000474319	ATP7A	Q04656	1500 aa		13.83	□□□□□ -0.2
LSS-208	ENST00000474319	CARD14	Q9BXL6	1004 aa		13.83	□□□□□ -0.2
LSS-208	ENST00000474319	CROCC2	H7BZ55	1655 aa		13.82	□□□□□ -0.2
LSS-208	ENST00000474319	CENPJ	Q9HC77	1338 aa	Predicted RBP	13.82	□□□□□ -0.2
LSS-208	ENST00000474319	UGGT1	Q9NYU2	1555 aa		13.82	□□□□□ -0.2
LSS-208	ENST00000474319	POLR1A	O95602	1720 aa	Predicted RBP	13.82	□□□□□ -0.2
LSS-208	ENST00000474319	KDM5D	Q9BY66	1539 aa		13.82	□□□□□ -0.2
LSS-208	ENST00000474319	RIMBP3C	A6NJZ7	1639 aa		13.82	□□□□□ -0.2
LSS-208	ENST00000474319	RIMBP3B	A6NNM3	1639 aa		13.82	□□□□□ -0.2
LSS-208	ENST00000474319	RIMBP3	Q9UFD9	1639 aa		13.82	□□□□□ -0.2
LSS-208	ENST00000474319	POGK	Q9P215	609 aa		13.81	□□□□□ -0.2
LSS-208	ENST00000474319	ARHGEF5	Q12774	1597 aa		13.81	□□□□□ -0.2
LSS-208	ENST00000474319	U2SURP	O15042	1029 aa	Known RBP	13.81	□□□□□ -0.2
LSS-208	ENST00000474319	USP35	Q9P2H5	1018 aa		13.8	□□□□□ -0.2
LSS-208	ENST00000474319	CDCA8	Q53HL2	280 aa		13.79	□□□□□ -0.2
LSS-208	ENST00000474319	RLBP1	P12271	317 aa		13.79	□□□□□ -0.2
LSS-208	ENST00000474319	U2AF1L5	P0DN76	240 aa	Predicted RBP	13.79	□□□□□ -0.2
LSS-208	ENST00000474319	U2AF1	Q01081	240 aa	Known RBP eCLIP	13.79	□□□□□ -0.2
LSS-208	ENST00000474319	TSR2	Q969E8	191 aa	Known RBP	13.79	□□□□□ -0.2
LSS-208	ENST00000474319	BLM	P54132	1417 aa	Predicted RBP	13.78	□□□□□ -0.2
LSS-208	ENST00000474319	POGZ	Q7Z3K3	1410 aa		13.78	□□□□□ -0.2
LSS-208	ENST00000474319	MINK1	Q8N4C8	1332 aa	Predicted RBP	13.78	□□□□□ -0.2
LSS-208	ENST00000474319	TCP11L2	Q8N4U5	519 aa		13.77	□□□□□ -0.2
LSS-208	ENST00000474319	SRPK2	P78362	688 aa	Known RBP	13.77	□□□□□ -0.21
LSS-208	ENST00000474319	WWC1	Q8IX03	1113 aa		13.77	□□□□□ -0.21
LSS-208	ENST00000474319		E9PSI1	815 aa		13.77	□□□□□ -0.21
LSS-208	ENST00000474319	MFAP1	P55081	439 aa	Known RBP	13.76	□□□□□ -0.21
LSS-208	ENST00000474319	MTHFS	P49914	203 aa		13.76	□□□□□ -0.21
LSS-208	ENST00000474319	PCDHB15	Q9Y5E8	787 aa		13.76	□□□□□ -0.21
LSS-208	ENST00000474319	ZFYVE16	Q7Z3T8	1539 aa		13.76	□□□□□ -0.21
LSS-208	ENST00000474319	FTSJ3	Q8IY81	847 aa	Known RBP	13.75	□□□□□ -0.21
LSS-208	ENST00000474319	FOXD4L1	Q9NU39	408 aa		13.75	□□□□□ -0.21
LSS-208	ENST00000474319	ZMYM4	Q5VZL5	1548 aa		13.74	□□□□□ -0.21
LSS-208	ENST00000474319	RTEL1-TNFRSF6B	F6WH68	1400 aa		13.74	□□□□□ -0.21
LSS-208	ENST00000474319	GPRASP1	Q5JY77	1395 aa		13.73	□□□□□ -0.21
LSS-208	ENST00000474319	NOS1	P29475	1434 aa		13.73	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 42 ms