RNA–Protein interactions for RNA: ENST00000474136.5

APP-215, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 1,309 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-215ENST00000474136 SLAIN2Q9P270 581 aa31.58■■■□□ 2.65
APP-215ENST00000474136 SLC52A1Q9NWF4 448 aa31.56■■■□□ 2.64
APP-215ENST00000474136 APLP2Q06481 763 aa31.52■■■□□ 2.64
APP-215ENST00000474136 JCADQ9P266 1359 aa31.51■■■□□ 2.63
APP-215ENST00000474136 ZFYVE9O95405 1425 aa31.49■■■□□ 2.63
APP-215ENST00000474136 PHLPP1O60346 1717 aa31.49■■■□□ 2.63
APP-215ENST00000474136 PLEKHG1Q9ULL1 1385 aa31.48■■■□□ 2.63
APP-215ENST00000474136 SETD1AO15047 1707 aaKnown RBP31.47■■■□□ 2.63
APP-215ENST00000474136 RIMS2Q9UQ26 1411 aa31.46■■■□□ 2.63
APP-215ENST00000474136 PPP1R15AO75807 674 aaPredicted RBP31.46■■■□□ 2.63
APP-215ENST00000474136 ADGRL2O95490 1459 aa31.42■■■□□ 2.62
APP-215ENST00000474136 RPRD2Q5VT52 1461 aaKnown RBP31.41■■■□□ 2.62
APP-215ENST00000474136 CHD2O14647 1828 aaKnown RBP31.4■■■□□ 2.62
APP-215ENST00000474136 COL16A1Q07092 1604 aaPredicted RBP31.4■■■□□ 2.62
APP-215ENST00000474136 LRP6O75581 1613 aa31.39■■■□□ 2.62
APP-215ENST00000474136 ANKRD50Q9ULJ7 1429 aa31.39■■■□□ 2.62
APP-215ENST00000474136 TBX22Q9Y458 520 aa31.39■■■□□ 2.62
APP-215ENST00000474136 MYO5BQ9ULV0 1848 aa31.38■■■□□ 2.61
APP-215ENST00000474136 HDGFP51858 240 aaKnown RBP31.38■■■□□ 2.61
APP-215ENST00000474136 NUTM2DQ5VT03 806 aaPredicted RBP31.38■■■□□ 2.61
APP-215ENST00000474136 C14orf37Q86TY3 774 aa31.38■■■□□ 2.61
APP-215ENST00000474136 CHGAP10645 457 aaKnown RBP31.37■■■□□ 2.61
APP-215ENST00000474136 FAM50AQ14320 339 aaKnown RBP31.37■■■□□ 2.61
APP-215ENST00000474136 GCC2Q8IWJ2 1684 aa31.36■■■□□ 2.61
APP-215ENST00000474136 TMEM131LA2VDJ0 1609 aa31.36■■■□□ 2.61
APP-215ENST00000474136 MEX3CQ5U5Q3 659 aaKnown RBP31.34■■■□□ 2.61
APP-215ENST00000474136 SPATA31A6Q5VVP1 1343 aa31.33■■■□□ 2.61
APP-215ENST00000474136 ADAMTS13Q76LX8 1427 aa31.33■■■□□ 2.61
APP-215ENST00000474136 NCOA3Q9Y6Q9 1424 aa31.33■■■□□ 2.61
APP-215ENST00000474136 ABCF1Q8NE71 845 aaKnown RBP eCLIP31.31■■■□□ 2.6
APP-215ENST00000474136 TRIM52Q96A61 297 aa31.3■■■□□ 2.6
APP-215ENST00000474136 CADPS2Q86UW7 1296 aa31.29■■■□□ 2.6
APP-215ENST00000474136 ZNF772Q68DY9 489 aaPredicted RBP31.28■■■□□ 2.6
APP-215ENST00000474136 UPF1Q92900 1129 aaKnown RBP eCLIP31.28■■■□□ 2.6
APP-215ENST00000474136 C19orf44Q9H6X5 657 aa31.28■■■□□ 2.6
APP-215ENST00000474136 ATF3P18847 181 aa31.27■■■□□ 2.6
APP-215ENST00000474136 SIPA1L2Q9P2F8 1722 aaPredicted RBP31.25■■■□□ 2.59
APP-215ENST00000474136 AHDC1Q5TGY3 1603 aaPredicted RBP31.25■■■□□ 2.59
APP-215ENST00000474136 PIK3R4Q99570 1358 aa31.22■■■□□ 2.59
APP-215ENST00000474136 BRINP3Q76B58 766 aa31.22■■■□□ 2.59
APP-215ENST00000474136 AMOTL2Q9Y2J4 779 aa31.22■■■□□ 2.59
APP-215ENST00000474136 PTPRUQ92729 1446 aa31.21■■■□□ 2.59
APP-215ENST00000474136 DIP2AQ14689 1571 aa31.2■■■□□ 2.58
APP-215ENST00000474136 NUTM2BA6NNL0 878 aaPredicted RBP31.2■■■□□ 2.58
APP-215ENST00000474136 NUTM2EB1AL46 878 aaPredicted RBP31.2■■■□□ 2.58
APP-215ENST00000474136 NUTM2AQ8IVF1 878 aaPredicted RBP31.2■■■□□ 2.58
APP-215ENST00000474136 SHPRHQ149N8 1683 aa31.19■■■□□ 2.58
APP-215ENST00000474136 UNC13BO14795 1591 aa31.18■■■□□ 2.58
APP-215ENST00000474136 E9PCH4 1651 aa31.17■■■□□ 2.58
APP-215ENST00000474136 RXRBP28702 533 aa31.17■■■□□ 2.58
APP-215ENST00000474136 TRPM2O94759 1503 aa31.13■■■□□ 2.57
APP-215ENST00000474136 AFF2P51816 1311 aa31.09■■■□□ 2.57
APP-215ENST00000474136 ASXL1Q8IXJ9 1541 aa31.08■■■□□ 2.57
APP-215ENST00000474136 NUP155O75694 1391 aa31.07■■■□□ 2.56
APP-215ENST00000474136 DCCP43146 1447 aa31.06■■■□□ 2.56
APP-215ENST00000474136 IQGAP3Q86VI3 1631 aa31.06■■■□□ 2.56
APP-215ENST00000474136 MST1RQ04912 1400 aa31.06■■■□□ 2.56
APP-215ENST00000474136 SETD5Q9C0A6 1442 aa31.05■■■□□ 2.56
APP-215ENST00000474136 DDX17Q92841 729 aaKnown RBP31.04■■■□□ 2.56
APP-215ENST00000474136 CDK12Q9NYV4 1490 aaPredicted RBP31.04■■■□□ 2.56
APP-215ENST00000474136 ROCK1Q13464 1354 aa31.03■■■□□ 2.56
APP-215ENST00000474136 NRXN3Q9Y4C0 1643 aa31.02■■■□□ 2.56
APP-215ENST00000474136 XRN1Q8IZH2 1706 aaKnown RBP31.01■■■□□ 2.55
APP-215ENST00000474136 METP08581 1390 aa31.01■■■□□ 2.55
APP-215ENST00000474136 LRRC59Q96AG4 307 aaKnown RBP30.99■■■□□ 2.55
APP-215ENST00000474136 C8orf37Q96NL8 207 aa30.98■■■□□ 2.55
APP-215ENST00000474136 SETBP1Q9Y6X0 1596 aa30.97■■■□□ 2.55
APP-215ENST00000474136 ZNF326Q5BKZ1 582 aaKnown RBP30.97■■■□□ 2.55
APP-215ENST00000474136 NHSL1Q5SYE7 1610 aa30.96■■■□□ 2.55
APP-215ENST00000474136 ITGAEP38570 1179 aa30.96■■■□□ 2.55
APP-215ENST00000474136 QTRT2Q9H974 415 aaKnown RBP30.96■■■□□ 2.55
APP-215ENST00000474136 PNPLA6Q8IY17 1366 aa30.95■■■□□ 2.55
APP-215ENST00000474136 RGS12O14924 1447 aa30.95■■■□□ 2.55
APP-215ENST00000474136 RBM6P78332 1123 aaKnown RBP30.92■■■□□ 2.54
APP-215ENST00000474136 ADGRL3Q9HAR2 1447 aa30.92■■■□□ 2.54
APP-215ENST00000474136 ADAMTS2O95450 1211 aa30.88■■■□□ 2.53
APP-215ENST00000474136 NGLY1Q96IV0 654 aa30.85■■■□□ 2.53
APP-215ENST00000474136 SPHKAPQ2M3C7 1700 aa30.84■■■□□ 2.53
APP-215ENST00000474136 C1orf167Q5SNV9 1468 aa30.83■■■□□ 2.53
APP-215ENST00000474136 NALCNQ8IZF0 1738 aa30.83■■■□□ 2.53
APP-215ENST00000474136 NEXMIFQ5QGS0 1516 aa30.8■■■□□ 2.52
APP-215ENST00000474136 SRCAPQ6ZRS2 3230 aa30.8■■■□□ 2.52
APP-215ENST00000474136 ORAI2Q96SN7 254 aa30.79■■■□□ 2.52
APP-215ENST00000474136 CLTCL1P53675 1640 aa30.77■■■□□ 2.52
APP-215ENST00000474136 SOS2Q07890 1332 aaPredicted RBP30.75■■■□□ 2.51
APP-215ENST00000474136 ROBO2Q9HCK4 1378 aa30.75■■■□□ 2.51
APP-215ENST00000474136 PPARGC1BQ86YN6 1023 aaKnown RBP30.74■■■□□ 2.51
APP-215ENST00000474136 USP21Q9UK80 565 aa30.74■■■□□ 2.51
APP-215ENST00000474136 ATAD2Q6PL18 1390 aa30.71■■■□□ 2.51
APP-215ENST00000474136 PTCH1Q13635 1447 aa30.71■■■□□ 2.51
APP-215ENST00000474136 LAMC1P11047 1609 aa30.7■■■□□ 2.5
APP-215ENST00000474136 TRPC5Q9UL62 973 aaPredicted RBP30.7■■■□□ 2.5
APP-215ENST00000474136 FNBP4Q8N3X1 1017 aaPredicted RBP30.68■■■□□ 2.5
APP-215ENST00000474136 ATRNO75882 1429 aa30.64■■■□□ 2.5
APP-215ENST00000474136 VGFO15240 615 aaPredicted RBP30.64■■■□□ 2.5
APP-215ENST00000474136 KIF1BO60333 1816 aa30.59■■■□□ 2.49
APP-215ENST00000474136 PRAG1Q86YV5 1406 aa30.58■■■□□ 2.49
APP-215ENST00000474136 MYOM2P54296 1465 aa30.58■■■□□ 2.49
APP-215ENST00000474136 HFM1A2PYH4 1435 aa30.57■■■□□ 2.48
APP-215ENST00000474136 ESCO1Q5FWF5 840 aa30.57■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms