RNA–Protein interactions for RNA: ENST00000472896.5

APTX-216, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,759 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-216ENST00000472896 RRP7BPQ9NSQ0 103 aa14.22□□□□□ -0.13
APTX-216ENST00000472896 STAG3Q9UJ98 1225 aa14.22□□□□□ -0.13
APTX-216ENST00000472896 MAP3K1Q13233 1512 aa14.22□□□□□ -0.13
APTX-216ENST00000472896 PIK3C2BO00750 1634 aa14.21□□□□□ -0.13
APTX-216ENST00000472896 SETD1AO15047 1707 aaKnown RBP14.21□□□□□ -0.13
APTX-216ENST00000472896 SLAIN2Q9P270 581 aa14.2□□□□□ -0.14
APTX-216ENST00000472896 TET3O43151 1660 aa14.2□□□□□ -0.14
APTX-216ENST00000472896 DUOX2Q9NRD8 1548 aa14.2□□□□□ -0.14
APTX-216ENST00000472896 LRRC9Q6ZRR7 1453 aa14.19□□□□□ -0.14
APTX-216ENST00000472896 FANCIQ9NVI1 1328 aa14.18□□□□□ -0.14
APTX-216ENST00000472896 ADRA2BP18089 450 aa14.18□□□□□ -0.14
APTX-216ENST00000472896 UPF1Q92900 1129 aaKnown RBP eCLIP14.18□□□□□ -0.14
APTX-216ENST00000472896 KIF15Q9NS87 1388 aa14.17□□□□□ -0.14
APTX-216ENST00000472896 NEFLP07196 543 aa14.17□□□□□ -0.14
APTX-216ENST00000472896 JCADQ9P266 1359 aa14.17□□□□□ -0.14
APTX-216ENST00000472896 PRDM15P57071 1507 aaPredicted RBP14.17□□□□□ -0.14
APTX-216ENST00000472896 MYOM3Q5VTT5 1437 aa14.16□□□□□ -0.14
APTX-216ENST00000472896 EFCAB6Q5THR3 1501 aa14.16□□□□□ -0.14
APTX-216ENST00000472896 DHX57Q6P158 1386 aaKnown RBP14.15□□□□□ -0.14
APTX-216ENST00000472896 ABCC5O15440 1437 aa14.15□□□□□ -0.14
APTX-216ENST00000472896 FKBP8Q14318 412 aa14.15□□□□□ -0.14
APTX-216ENST00000472896 PHLPP1O60346 1717 aa14.15□□□□□ -0.14
APTX-216ENST00000472896 MSH6P52701 1360 aa14.15□□□□□ -0.14
APTX-216ENST00000472896 TRIM52Q96A61 297 aa14.14□□□□□ -0.15
APTX-216ENST00000472896 BCANQ96GW7 911 aa14.14□□□□□ -0.15
APTX-216ENST00000472896 VPS8Q8N3P4 1428 aa14.13□□□□□ -0.15
APTX-216ENST00000472896 ERBINQ96RT1 1412 aa14.13□□□□□ -0.15
APTX-216ENST00000472896 LRP6O75581 1613 aa14.12□□□□□ -0.15
APTX-216ENST00000472896 NWD1Q149M9 1564 aa14.12□□□□□ -0.15
APTX-216ENST00000472896 KANK1Q14678 1352 aa14.11□□□□□ -0.15
APTX-216ENST00000472896 NOS1P29475 1434 aa14.11□□□□□ -0.15
APTX-216ENST00000472896 NKTRP30414 1462 aaKnown RBP14.11□□□□□ -0.15
APTX-216ENST00000472896 KDM5AP29375 1690 aaKnown RBP14.11□□□□□ -0.15
APTX-216ENST00000472896 COL16A1Q07092 1604 aaPredicted RBP14.1□□□□□ -0.15
APTX-216ENST00000472896 CHIC2Q9UKJ5 165 aa14.1□□□□□ -0.15
APTX-216ENST00000472896 MEX3CQ5U5Q3 659 aaKnown RBP14.09□□□□□ -0.15
APTX-216ENST00000472896 LMTK2Q8IWU2 1503 aa14.09□□□□□ -0.15
APTX-216ENST00000472896 ZNF772Q68DY9 489 aaPredicted RBP14.09□□□□□ -0.15
APTX-216ENST00000472896 SPATA31A6Q5VVP1 1343 aa14.08□□□□□ -0.16
APTX-216ENST00000472896 APLP2Q06481 763 aa14.08□□□□□ -0.16
APTX-216ENST00000472896 SLC52A1Q9NWF4 448 aa14.08□□□□□ -0.16
APTX-216ENST00000472896 CHD2O14647 1828 aaKnown RBP14.07□□□□□ -0.16
APTX-216ENST00000472896 ADGRB3O60242 1522 aa14.07□□□□□ -0.16
APTX-216ENST00000472896 RXRBP28702 533 aa14.06□□□□□ -0.16
APTX-216ENST00000472896 TBX22Q9Y458 520 aa14.06□□□□□ -0.16
APTX-216ENST00000472896 ZFYVE9O95405 1425 aa14.06□□□□□ -0.16
APTX-216ENST00000472896 DAPK1P53355 1430 aa14.06□□□□□ -0.16
APTX-216ENST00000472896 PLEKHG1Q9ULL1 1385 aa14.06□□□□□ -0.16
APTX-216ENST00000472896 NUTM2BA6NNL0 878 aaPredicted RBP14.05□□□□□ -0.16
APTX-216ENST00000472896 NUTM2EB1AL46 878 aaPredicted RBP14.05□□□□□ -0.16
APTX-216ENST00000472896 NUTM2AQ8IVF1 878 aaPredicted RBP14.05□□□□□ -0.16
APTX-216ENST00000472896 FGD6Q6ZV73 1430 aa14.05□□□□□ -0.16
APTX-216ENST00000472896 CROCC2H7BZ55 1655 aa14.05□□□□□ -0.16
APTX-216ENST00000472896 NUTM2DQ5VT03 806 aaPredicted RBP14.04□□□□□ -0.16
APTX-216ENST00000472896 C14orf37Q86TY3 774 aa14.04□□□□□ -0.16
APTX-216ENST00000472896 RIMS2Q9UQ26 1411 aa14.04□□□□□ -0.16
APTX-216ENST00000472896 PPP1R15AO75807 674 aaPredicted RBP14.04□□□□□ -0.16
APTX-216ENST00000472896 C19orf44Q9H6X5 657 aa14.04□□□□□ -0.16
APTX-216ENST00000472896 PTPN23Q9H3S7 1636 aa14.03□□□□□ -0.16
APTX-216ENST00000472896 MYO5BQ9ULV0 1848 aa14.03□□□□□ -0.16
APTX-216ENST00000472896 ANKRD30AQ9BXX3 1397 aa14.03□□□□□ -0.16
APTX-216ENST00000472896 NCOA3Q9Y6Q9 1424 aa14.02□□□□□ -0.16
APTX-216ENST00000472896 CADPS2Q86UW7 1296 aa14.02□□□□□ -0.16
APTX-216ENST00000472896 CCER2I3L3R5 266 aa14.01□□□□□ -0.17
APTX-216ENST00000472896 ATF3P18847 181 aa14.01□□□□□ -0.17
APTX-216ENST00000472896 ERICH6BQ5W0A0 696 aa14.01□□□□□ -0.17
APTX-216ENST00000472896 BRINP3Q76B58 766 aa14.01□□□□□ -0.17
APTX-216ENST00000472896 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.01□□□□□ -0.17
APTX-216ENST00000472896 AHDC1Q5TGY3 1603 aaPredicted RBP14.01□□□□□ -0.17
APTX-216ENST00000472896 ADAMTS13Q76LX8 1427 aa14.01□□□□□ -0.17
APTX-216ENST00000472896 HDGFP51858 240 aaKnown RBP14.01□□□□□ -0.17
APTX-216ENST00000472896 SHPRHQ149N8 1683 aa14□□□□□ -0.17
APTX-216ENST00000472896 AFF2P51816 1311 aa14□□□□□ -0.17
APTX-216ENST00000472896 CHGAP10645 457 aaKnown RBP13.99□□□□□ -0.17
APTX-216ENST00000472896 TMEM131LA2VDJ0 1609 aa13.98□□□□□ -0.17
APTX-216ENST00000472896 DIP2AQ14689 1571 aa13.98□□□□□ -0.17
APTX-216ENST00000472896 AMOTL2Q9Y2J4 779 aa13.98□□□□□ -0.17
APTX-216ENST00000472896 PTPRUQ92729 1446 aa13.97□□□□□ -0.17
APTX-216ENST00000472896 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.97□□□□□ -0.17
APTX-216ENST00000472896 CDK12Q9NYV4 1490 aaPredicted RBP13.97□□□□□ -0.17
APTX-216ENST00000472896 GCC2Q8IWJ2 1684 aa13.96□□□□□ -0.17
APTX-216ENST00000472896 QTRT2Q9H974 415 aaKnown RBP13.96□□□□□ -0.17
APTX-216ENST00000472896 RPRD2Q5VT52 1461 aaKnown RBP13.96□□□□□ -0.17
APTX-216ENST00000472896 DEKP35659 375 aaKnown RBP13.96□□□□□ -0.18
APTX-216ENST00000472896 DDX17Q92841 729 aaKnown RBP13.96□□□□□ -0.18
APTX-216ENST00000472896 DAXXQ9UER7 740 aaPredicted RBP13.96□□□□□ -0.18
APTX-216ENST00000472896 PIK3R4Q99570 1358 aa13.94□□□□□ -0.18
APTX-216ENST00000472896 C8orf37Q96NL8 207 aa13.94□□□□□ -0.18
APTX-216ENST00000472896 RGS12O14924 1447 aa13.93□□□□□ -0.18
APTX-216ENST00000472896 SETD5Q9C0A6 1442 aa13.93□□□□□ -0.18
APTX-216ENST00000472896 RRBP1Q9P2E9 1410 aaKnown RBP13.93□□□□□ -0.18
APTX-216ENST00000472896 RBM6P78332 1123 aaKnown RBP13.93□□□□□ -0.18
APTX-216ENST00000472896 ANKRD50Q9ULJ7 1429 aa13.93□□□□□ -0.18
APTX-216ENST00000472896 ADGRL2O95490 1459 aa13.93□□□□□ -0.18
APTX-216ENST00000472896 LRRC59Q96AG4 307 aaKnown RBP13.91□□□□□ -0.18
APTX-216ENST00000472896 ASXL1Q8IXJ9 1541 aa13.91□□□□□ -0.18
APTX-216ENST00000472896 MST1RQ04912 1400 aa13.9□□□□□ -0.18
APTX-216ENST00000472896 FAM50AQ14320 339 aaKnown RBP13.9□□□□□ -0.18
APTX-216ENST00000472896 PNPLA6Q8IY17 1366 aa13.89□□□□□ -0.19
APTX-216ENST00000472896 ADAMTS2O95450 1211 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms