RNA–Protein interactions for RNA: ENST00000472096.1

CALD1-215, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 651 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-215ENST00000472096 POTEDQ86YR6 584 aa22.7■■□□□ 1.22
CALD1-215ENST00000472096 CERKQ8TCT0 537 aa22.7■■□□□ 1.22
CALD1-215ENST00000472096 SLC52A1Q9NWF4 448 aa22.7■■□□□ 1.22
CALD1-215ENST00000472096 TMEM2Q9UHN6 1383 aa22.69■■□□□ 1.22
CALD1-215ENST00000472096 ILDR1Q86SU0 546 aaPredicted RBP22.69■■□□□ 1.22
CALD1-215ENST00000472096 ZNF335Q9H4Z2 1342 aaPredicted RBP22.68■■□□□ 1.22
CALD1-215ENST00000472096 STAG3Q9UJ98 1225 aa22.68■■□□□ 1.22
CALD1-215ENST00000472096 FBXO41Q8TF61 875 aa22.65■■□□□ 1.22
CALD1-215ENST00000472096 IQSEC2Q5JU85 1478 aa22.65■■□□□ 1.22
CALD1-215ENST00000472096 STRCP1A6NGW2 1772 aa22.64■■□□□ 1.22
CALD1-215ENST00000472096 TRPM2O94759 1503 aa22.64■■□□□ 1.21
CALD1-215ENST00000472096 LTKP29376 864 aa22.63■■□□□ 1.21
CALD1-215ENST00000472096 CLTCL1P53675 1640 aa22.63■■□□□ 1.21
CALD1-215ENST00000472096 ZFYVE9O95405 1425 aa22.62■■□□□ 1.21
CALD1-215ENST00000472096 CPS1P31327 1500 aa22.62■■□□□ 1.21
CALD1-215ENST00000472096 TXNDC2Q86VQ3 553 aa22.61■■□□□ 1.21
CALD1-215ENST00000472096 KIF1BO60333 1816 aa22.6■■□□□ 1.21
CALD1-215ENST00000472096 TRIM52Q96A61 297 aa22.6■■□□□ 1.21
CALD1-215ENST00000472096 EID1Q9Y6B2 187 aa22.6■■□□□ 1.21
CALD1-215ENST00000472096 RIMS2Q9UQ26 1411 aa22.57■■□□□ 1.2
CALD1-215ENST00000472096 MYCNP04198 464 aaPredicted RBP22.56■■□□□ 1.2
CALD1-215ENST00000472096 SETD5Q9C0A6 1442 aa22.56■■□□□ 1.2
CALD1-215ENST00000472096 CHGAP10645 457 aaKnown RBP22.53■■□□□ 1.2
CALD1-215ENST00000472096 PLEKHG1Q9ULL1 1385 aa22.5■■□□□ 1.19
CALD1-215ENST00000472096 XIRP1Q702N8 1843 aaKnown RBP22.49■■□□□ 1.19
CALD1-215ENST00000472096 NWD1Q149M9 1564 aa22.49■■□□□ 1.19
CALD1-215ENST00000472096 RAB3GAP2Q9H2M9 1393 aa22.49■■□□□ 1.19
CALD1-215ENST00000472096 NEXMIFQ5QGS0 1516 aa22.47■■□□□ 1.19
CALD1-215ENST00000472096 DIP2AQ14689 1571 aa22.47■■□□□ 1.19
CALD1-215ENST00000472096 LRRC7Q96NW7 1537 aa22.47■■□□□ 1.19
CALD1-215ENST00000472096 CHD2O14647 1828 aaKnown RBP22.46■■□□□ 1.19
CALD1-215ENST00000472096 PPP1R15AO75807 674 aaPredicted RBP22.46■■□□□ 1.19
CALD1-215ENST00000472096 ACIN1Q9UKV3 1341 aaKnown RBP22.46■■□□□ 1.19
CALD1-215ENST00000472096 NRXN3Q9Y4C0 1643 aa22.46■■□□□ 1.19
CALD1-215ENST00000472096 HDGFP51858 240 aaKnown RBP22.45■■□□□ 1.18
CALD1-215ENST00000472096 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.45■■□□□ 1.18
CALD1-215ENST00000472096 MPHOSPH9Q99550 1183 aa22.44■■□□□ 1.18
CALD1-215ENST00000472096 PPLO60437 1756 aa22.43■■□□□ 1.18
CALD1-215ENST00000472096 SETBP1Q9Y6X0 1596 aa22.42■■□□□ 1.18
CALD1-215ENST00000472096 SLC26A8Q96RN1 970 aa22.42■■□□□ 1.18
CALD1-215ENST00000472096 ADAMTS13Q76LX8 1427 aa22.41■■□□□ 1.18
CALD1-215ENST00000472096 NUTM2DQ5VT03 806 aaPredicted RBP22.41■■□□□ 1.18
CALD1-215ENST00000472096 NKTRP30414 1462 aaKnown RBP22.41■■□□□ 1.18
CALD1-215ENST00000472096 BCANQ96GW7 911 aa22.39■■□□□ 1.17
CALD1-215ENST00000472096 IFT172Q9UG01 1749 aa22.39■■□□□ 1.17
CALD1-215ENST00000472096 CCDC144AA2RUR9 1427 aa22.39■■□□□ 1.17
CALD1-215ENST00000472096 ALKQ9UM73 1620 aa22.39■■□□□ 1.17
CALD1-215ENST00000472096 ZNF326Q5BKZ1 582 aaKnown RBP22.38■■□□□ 1.17
CALD1-215ENST00000472096 U3KPZ7 1027 aaPredicted RBP22.38■■□□□ 1.17
CALD1-215ENST00000472096 SETD1AO15047 1707 aaKnown RBP22.35■■□□□ 1.17
CALD1-215ENST00000472096 UBAP1LF5GYI3 381 aa22.35■■□□□ 1.17
CALD1-215ENST00000472096 KCNA6P17658 529 aa22.35■■□□□ 1.17
CALD1-215ENST00000472096 TBX22Q9Y458 520 aa22.33■■□□□ 1.17
CALD1-215ENST00000472096 XRN1Q8IZH2 1706 aaKnown RBP22.33■■□□□ 1.17
CALD1-215ENST00000472096 SPATA31E1Q6ZUB1 1445 aa22.32■■□□□ 1.16
CALD1-215ENST00000472096 PIK3R4Q99570 1358 aa22.32■■□□□ 1.16
CALD1-215ENST00000472096 HRCP23327 699 aa22.3■■□□□ 1.16
CALD1-215ENST00000472096 TMEM94Q12767 1356 aa22.29■■□□□ 1.16
CALD1-215ENST00000472096 RPGRIP1LQ68CZ1 1315 aa22.28■■□□□ 1.16
CALD1-215ENST00000472096 TOM1O60784 492 aa22.27■■□□□ 1.16
CALD1-215ENST00000472096 PTPRUQ92729 1446 aa22.27■■□□□ 1.16
CALD1-215ENST00000472096 PROSER2Q86WR7 435 aaPredicted RBP22.24■■□□□ 1.15
CALD1-215ENST00000472096 VGFO15240 615 aaPredicted RBP22.23■■□□□ 1.15
CALD1-215ENST00000472096 ANKRD30BQ9BXX2 1392 aa22.23■■□□□ 1.15
CALD1-215ENST00000472096 METP08581 1390 aa22.22■■□□□ 1.15
CALD1-215ENST00000472096 PIP4K2BP78356 416 aa22.21■■□□□ 1.15
CALD1-215ENST00000472096 ATXN8OSP0DMR3 200 aa22.2■■□□□ 1.14
CALD1-215ENST00000472096 RBM33Q96EV2 1170 aaKnown RBP22.2■■□□□ 1.14
CALD1-215ENST00000472096 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.2■■□□□ 1.14
CALD1-215ENST00000472096 NCOA3Q9Y6Q9 1424 aa22.19■■□□□ 1.14
CALD1-215ENST00000472096 RGL3Q3MIN7 710 aa22.18■■□□□ 1.14
CALD1-215ENST00000472096 AMOTL2Q9Y2J4 779 aa22.18■■□□□ 1.14
CALD1-215ENST00000472096 MYOM2P54296 1465 aa22.17■■□□□ 1.14
CALD1-215ENST00000472096 MSH6P52701 1360 aa22.17■■□□□ 1.14
CALD1-215ENST00000472096 NALCNQ8IZF0 1738 aa22.16■■□□□ 1.14
CALD1-215ENST00000472096 ROBO1Q9Y6N7 1651 aa22.16■■□□□ 1.14
CALD1-215ENST00000472096 LAMC1P11047 1609 aa22.16■■□□□ 1.14
CALD1-215ENST00000472096 PIK3C2GO75747 1445 aa22.15■■□□□ 1.14
CALD1-215ENST00000472096 ADGRF5Q8IZF2 1346 aa22.15■■□□□ 1.14
CALD1-215ENST00000472096 PRAG1Q86YV5 1406 aa22.14■■□□□ 1.14
CALD1-215ENST00000472096 ASXL1Q8IXJ9 1541 aa22.14■■□□□ 1.13
CALD1-215ENST00000472096 NRXN1Q9ULB1 1477 aa22.14■■□□□ 1.13
CALD1-215ENST00000472096 KNDC1Q76NI1 1749 aa22.14■■□□□ 1.13
CALD1-215ENST00000472096 PTCH1Q13635 1447 aa22.13■■□□□ 1.13
CALD1-215ENST00000472096 HSPA1LP34931 641 aa22.1■■□□□ 1.13
CALD1-215ENST00000472096 SAMD1Q6SPF0 538 aaPredicted RBP22.1■■□□□ 1.13
CALD1-215ENST00000472096 FAM135BQ49AJ0 1406 aa22.09■■□□□ 1.13
CALD1-215ENST00000472096 DCCP43146 1447 aa22.08■■□□□ 1.13
CALD1-215ENST00000472096 C14orf37Q86TY3 774 aa22.08■■□□□ 1.13
CALD1-215ENST00000472096 ADGRL3Q9HAR2 1447 aa22.07■■□□□ 1.12
CALD1-215ENST00000472096 ROBO2Q9HCK4 1378 aa22.05■■□□□ 1.12
CALD1-215ENST00000472096 C19orf44Q9H6X5 657 aa22.04■■□□□ 1.12
CALD1-215ENST00000472096 ATF5Q9Y2D1 282 aaPredicted RBP22.04■■□□□ 1.12
CALD1-215ENST00000472096 TECPR2O15040 1411 aa22.04■■□□□ 1.12
CALD1-215ENST00000472096 PHLPP1O60346 1717 aa22.03■■□□□ 1.12
CALD1-215ENST00000472096 LRPPRCP42704 1394 aaKnown RBP22.01■■□□□ 1.11
CALD1-215ENST00000472096 CADPS2Q86UW7 1296 aa22.01■■□□□ 1.11
CALD1-215ENST00000472096 SLAIN2Q9P270 581 aa22.01■■□□□ 1.11
CALD1-215ENST00000472096 ATF3P18847 181 aa22■■□□□ 1.11
CALD1-215ENST00000472096 TRIM26Q12899 539 aaPredicted RBP22■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms