RNA–Protein interactions for RNA: ENST00000471909.1

RRP1-202, Transcript of ribosomal RNA processing 1, humanhuman

TSL 1 (best)

Gene RRP1, Length 2,544 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1-202ENST00000471909 KIF1BO60333 1816 aa23.55■■□□□ 1.36
RRP1-202ENST00000471909 RICTORQ6R327 1708 aa23.55■■□□□ 1.36
RRP1-202ENST00000471909 ABCC3O15438 1527 aa23.55■■□□□ 1.36
RRP1-202ENST00000471909 PNISRQ8TF01 805 aaKnown RBP23.55■■□□□ 1.36
RRP1-202ENST00000471909 TMC1Q8TDI8 760 aa23.55■■□□□ 1.36
RRP1-202ENST00000471909 MROH2AA6NES4 1674 aa23.53■■□□□ 1.36
RRP1-202ENST00000471909 CFAP70Q5T0N1 1121 aa23.53■■□□□ 1.36
RRP1-202ENST00000471909 KIAA1210Q9ULL0 1709 aa23.52■■□□□ 1.36
RRP1-202ENST00000471909 PANK3Q9H999 370 aa23.52■■□□□ 1.36
RRP1-202ENST00000471909 ADGRB3O60242 1522 aa23.52■■□□□ 1.36
RRP1-202ENST00000471909 PARD3Q8TEW0 1356 aa23.52■■□□□ 1.36
RRP1-202ENST00000471909 BRD4O60885 1362 aaPredicted RBP23.51■■□□□ 1.35
RRP1-202ENST00000471909 YEATS2Q9ULM3 1422 aa23.51■■□□□ 1.35
RRP1-202ENST00000471909 FAM69CQ0P6D2 419 aa23.5■■□□□ 1.35
RRP1-202ENST00000471909 IFT172Q9UG01 1749 aa23.5■■□□□ 1.35
RRP1-202ENST00000471909 NRXN1Q9ULB1 1477 aa23.49■■□□□ 1.35
RRP1-202ENST00000471909 CHGAP10645 457 aaKnown RBP23.49■■□□□ 1.35
RRP1-202ENST00000471909 EIF3AQ14152 1382 aaKnown RBP23.47■■□□□ 1.35
RRP1-202ENST00000471909 NOS1P29475 1434 aa23.47■■□□□ 1.35
RRP1-202ENST00000471909 CAMSAP1Q5T5Y3 1602 aa23.46■■□□□ 1.35
RRP1-202ENST00000471909 MSH5O43196 834 aa23.46■■□□□ 1.35
RRP1-202ENST00000471909 CFAP65Q6ZU64 1925 aaKnown RBP23.46■■□□□ 1.35
RRP1-202ENST00000471909 DIP2BQ9P265 1576 aa23.46■■□□□ 1.35
RRP1-202ENST00000471909 NLRP13Q86W25 1043 aa23.45■■□□□ 1.34
RRP1-202ENST00000471909 LRPPRCP42704 1394 aaKnown RBP23.45■■□□□ 1.34
RRP1-202ENST00000471909 FANCIQ9NVI1 1328 aa23.44■■□□□ 1.34
RRP1-202ENST00000471909 CC2D1BQ5T0F9 858 aaKnown RBP23.44■■□□□ 1.34
RRP1-202ENST00000471909 CDCA8Q53HL2 280 aa23.43■■□□□ 1.34
RRP1-202ENST00000471909 IRX6P78412 446 aaPredicted RBP23.42■■□□□ 1.34
RRP1-202ENST00000471909 SIGLEC1Q9BZZ2 1709 aa23.42■■□□□ 1.34
RRP1-202ENST00000471909 ARHGAP31Q2M1Z3 1444 aa23.4■■□□□ 1.34
RRP1-202ENST00000471909 ZMYM4Q5VZL5 1548 aa23.39■■□□□ 1.33
RRP1-202ENST00000471909 RPGRIP1LQ68CZ1 1315 aa23.39■■□□□ 1.33
RRP1-202ENST00000471909 SYNMO15061 1565 aa23.39■■□□□ 1.33
RRP1-202ENST00000471909 PIK3C2GO75747 1445 aa23.39■■□□□ 1.33
RRP1-202ENST00000471909 ERICH6BQ5W0A0 696 aa23.38■■□□□ 1.33
RRP1-202ENST00000471909 PPLO60437 1756 aa23.38■■□□□ 1.33
RRP1-202ENST00000471909 PIK3C2BO00750 1634 aa23.37■■□□□ 1.33
RRP1-202ENST00000471909 ZC3H13Q5T200 1668 aaKnown RBP23.36■■□□□ 1.33
RRP1-202ENST00000471909 SENP3-EIF4A1A0A087X0R7 540 aa23.36■■□□□ 1.33
RRP1-202ENST00000471909 C14orf93Q9H972 538 aaKnown RBP23.36■■□□□ 1.33
RRP1-202ENST00000471909 ERICH6Q7L0X2 663 aa23.35■■□□□ 1.33
RRP1-202ENST00000471909 SETBP1Q9Y6X0 1596 aa23.35■■□□□ 1.33
RRP1-202ENST00000471909 KNSTRNQ9Y448 316 aa23.34■■□□□ 1.33
RRP1-202ENST00000471909 SMG6Q86US8 1419 aaKnown RBP23.34■■□□□ 1.33
RRP1-202ENST00000471909 SLC24A1O60721 1099 aa23.34■■□□□ 1.33
RRP1-202ENST00000471909 ERVK-7P63135 1459 aa23.34■■□□□ 1.33
RRP1-202ENST00000471909 TSPOAP1O95153 1857 aa23.32■■□□□ 1.32
RRP1-202ENST00000471909 IDI1Q13907 227 aa23.32■■□□□ 1.32
RRP1-202ENST00000471909 AMER1Q5JTC6 1135 aaPredicted RBP23.32■■□□□ 1.32
RRP1-202ENST00000471909 MYOM1P52179 1685 aa23.32■■□□□ 1.32
RRP1-202ENST00000471909 PPP4R2Q9NY27 417 aa23.32■■□□□ 1.32
RRP1-202ENST00000471909 ADGRB1O14514 1584 aa23.31■■□□□ 1.32
RRP1-202ENST00000471909 MYO3AQ8NEV4 1616 aa23.3■■□□□ 1.32
RRP1-202ENST00000471909 KDM5AP29375 1690 aaKnown RBP23.3■■□□□ 1.32
RRP1-202ENST00000471909 SBNO2Q9Y2G9 1366 aa23.3■■□□□ 1.32
RRP1-202ENST00000471909 NUDCQ9Y266 331 aa23.29■■□□□ 1.32
RRP1-202ENST00000471909 TMEM132EQ6IEE7 984 aa23.29■■□□□ 1.32
RRP1-202ENST00000471909 SLC52A1Q9NWF4 448 aa23.29■■□□□ 1.32
RRP1-202ENST00000471909 TRAK1Q9UPV9 953 aa23.29■■□□□ 1.32
RRP1-202ENST00000471909 CENPJQ9HC77 1338 aaPredicted RBP23.28■■□□□ 1.32
RRP1-202ENST00000471909 NUTM2DQ5VT03 806 aaPredicted RBP23.28■■□□□ 1.32
RRP1-202ENST00000471909 NEXMIFQ5QGS0 1516 aa23.28■■□□□ 1.32
RRP1-202ENST00000471909 VGFO15240 615 aaPredicted RBP23.27■■□□□ 1.32
RRP1-202ENST00000471909 ASXL1Q8IXJ9 1541 aa23.26■■□□□ 1.31
RRP1-202ENST00000471909 PREX1Q8TCU6 1659 aa23.23■■□□□ 1.31
RRP1-202ENST00000471909 PPP2R1AP30153 589 aa23.23■■□□□ 1.31
RRP1-202ENST00000471909 NPC1L1Q9UHC9 1359 aa23.23■■□□□ 1.31
RRP1-202ENST00000471909 FBXO31Q5XUX0 539 aaPredicted RBP23.23■■□□□ 1.31
RRP1-202ENST00000471909 REREQ9P2R6 1566 aa23.23■■□□□ 1.31
RRP1-202ENST00000471909 AGLP35573 1532 aa23.21■■□□□ 1.31
RRP1-202ENST00000471909 INSRP06213 1382 aa23.21■■□□□ 1.31
RRP1-202ENST00000471909 CARD14Q9BXL6 1004 aa23.2■■□□□ 1.3
RRP1-202ENST00000471909 ZFYVE9O95405 1425 aa23.2■■□□□ 1.3
RRP1-202ENST00000471909 BLMP54132 1417 aaPredicted RBP23.19■■□□□ 1.3
RRP1-202ENST00000471909 TMEM131LA2VDJ0 1609 aa23.18■■□□□ 1.3
RRP1-202ENST00000471909 QRICH2Q9H0J4 1663 aa23.17■■□□□ 1.3
RRP1-202ENST00000471909 PPP6R1Q9UPN7 881 aa23.17■■□□□ 1.3
RRP1-202ENST00000471909 SALL2Q9Y467 1007 aaPredicted RBP23.17■■□□□ 1.3
RRP1-202ENST00000471909 RNF123Q5XPI4 1314 aa23.16■■□□□ 1.3
RRP1-202ENST00000471909 B4GALNT3Q6L9W6 998 aa23.14■■□□□ 1.3
RRP1-202ENST00000471909 KIF13AQ9H1H9 1805 aa23.14■■□□□ 1.29
RRP1-202ENST00000471909 MYO5BQ9ULV0 1848 aa23.14■■□□□ 1.29
RRP1-202ENST00000471909 ADAMTS8Q9UP79 889 aa23.14■■□□□ 1.29
RRP1-202ENST00000471909 SENP3Q9H4L4 574 aaPredicted RBP23.11■■□□□ 1.29
RRP1-202ENST00000471909 PDE3BQ13370 1112 aa23.11■■□□□ 1.29
RRP1-202ENST00000471909 SLC12A5Q9H2X9 1139 aa23.11■■□□□ 1.29
RRP1-202ENST00000471909 ARHGEF28Q8N1W1 1705 aaKnown RBP23.1■■□□□ 1.29
RRP1-202ENST00000471909 MLECQ14165 292 aa23.1■■□□□ 1.29
RRP1-202ENST00000471909 CLTCQ00610 1675 aaKnown RBP23.09■■□□□ 1.29
RRP1-202ENST00000471909 ARHGEF40Q8TER5 1519 aa23.08■■□□□ 1.29
RRP1-202ENST00000471909 WDR43Q15061 677 aaKnown RBP eCLIP23.08■■□□□ 1.28
RRP1-202ENST00000471909 EVC2Q86UK5 1308 aa23.07■■□□□ 1.28
RRP1-202ENST00000471909 TULP4Q9NRJ4 1543 aa23.06■■□□□ 1.28
RRP1-202ENST00000471909 CDCA7LQ96GN5 454 aa23.06■■□□□ 1.28
RRP1-202ENST00000471909 STK26Q9P289 416 aa23.06■■□□□ 1.28
RRP1-202ENST00000471909 STAG3Q9UJ98 1225 aa23.06■■□□□ 1.28
RRP1-202ENST00000471909 NSD3Q9BZ95 1437 aa23.06■■□□□ 1.28
RRP1-202ENST00000471909 PUS7Q96PZ0 661 aaKnown RBP23.06■■□□□ 1.28
RRP1-202ENST00000471909 SPATA31D1Q6ZQQ2 1576 aa23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms