RNA–Protein interactions for RNA: ENST00000471261.2

PPP1R3F-204, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

TSL 3

Gene PPP1R3F, Length 503 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-204ENST00000471261 SPHKAPQ2M3C7 1700 aa18.8■□□□□ 0.6
PPP1R3F-204ENST00000471261 ZNF326Q5BKZ1 582 aaKnown RBP18.8■□□□□ 0.6
PPP1R3F-204ENST00000471261 ZFYVE9O95405 1425 aa18.8■□□□□ 0.6
PPP1R3F-204ENST00000471261 SETD5Q9C0A6 1442 aa18.8■□□□□ 0.6
PPP1R3F-204ENST00000471261 FOXD1Q16676 465 aa18.79■□□□□ 0.6
PPP1R3F-204ENST00000471261 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.79■□□□□ 0.6
PPP1R3F-204ENST00000471261 MYO5BQ9ULV0 1848 aa18.79■□□□□ 0.6
PPP1R3F-204ENST00000471261 UBAP1LF5GYI3 381 aa18.78■□□□□ 0.6
PPP1R3F-204ENST00000471261 TRPM2O94759 1503 aa18.76■□□□□ 0.59
PPP1R3F-204ENST00000471261 MPHOSPH9Q99550 1183 aa18.76■□□□□ 0.59
PPP1R3F-204ENST00000471261 PLEKHG1Q9ULL1 1385 aa18.76■□□□□ 0.59
PPP1R3F-204ENST00000471261 CLTCL1P53675 1640 aa18.74■□□□□ 0.59
PPP1R3F-204ENST00000471261 RAB3GAP2Q9H2M9 1393 aa18.74■□□□□ 0.59
PPP1R3F-204ENST00000471261 ACIN1Q9UKV3 1341 aaKnown RBP18.73■□□□□ 0.59
PPP1R3F-204ENST00000471261 SCAF1Q9H7N4 1312 aaKnown RBP18.72■□□□□ 0.59
PPP1R3F-204ENST00000471261 STRCP1A6NGW2 1772 aa18.71■□□□□ 0.59
PPP1R3F-204ENST00000471261 LRRC7Q96NW7 1537 aa18.71■□□□□ 0.59
PPP1R3F-204ENST00000471261 KCNA6P17658 529 aa18.71■□□□□ 0.59
PPP1R3F-204ENST00000471261 PIP4K2BP78356 416 aa18.7■□□□□ 0.58
PPP1R3F-204ENST00000471261 TOM1O60784 492 aa18.69■□□□□ 0.58
PPP1R3F-204ENST00000471261 RBM33Q96EV2 1170 aaKnown RBP18.67■□□□□ 0.58
PPP1R3F-204ENST00000471261 TBX22Q9Y458 520 aa18.67■□□□□ 0.58
PPP1R3F-204ENST00000471261 CCDC144AA2RUR9 1427 aa18.66■□□□□ 0.58
PPP1R3F-204ENST00000471261 PROSER2Q86WR7 435 aaPredicted RBP18.66■□□□□ 0.58
PPP1R3F-204ENST00000471261 KIF1BO60333 1816 aa18.65■□□□□ 0.58
PPP1R3F-204ENST00000471261 ADAMTS13Q76LX8 1427 aa18.65■□□□□ 0.58
PPP1R3F-204ENST00000471261 TMEM94Q12767 1356 aa18.64■□□□□ 0.57
PPP1R3F-204ENST00000471261 NEXMIFQ5QGS0 1516 aa18.63■□□□□ 0.57
PPP1R3F-204ENST00000471261 RGL3Q3MIN7 710 aa18.62■□□□□ 0.57
PPP1R3F-204ENST00000471261 DIP2AQ14689 1571 aa18.61■□□□□ 0.57
PPP1R3F-204ENST00000471261 NKTRP30414 1462 aaKnown RBP18.61■□□□□ 0.57
PPP1R3F-204ENST00000471261 VGFO15240 615 aaPredicted RBP18.61■□□□□ 0.57
PPP1R3F-204ENST00000471261 NWD1Q149M9 1564 aa18.6■□□□□ 0.57
PPP1R3F-204ENST00000471261 RPGRIP1LQ68CZ1 1315 aa18.6■□□□□ 0.57
PPP1R3F-204ENST00000471261 PIK3R4Q99570 1358 aa18.58■□□□□ 0.57
PPP1R3F-204ENST00000471261 HRCP23327 699 aa18.58■□□□□ 0.56
PPP1R3F-204ENST00000471261 C14orf37Q86TY3 774 aa18.58■□□□□ 0.56
PPP1R3F-204ENST00000471261 AMOTL2Q9Y2J4 779 aa18.58■□□□□ 0.56
PPP1R3F-204ENST00000471261 SETBP1Q9Y6X0 1596 aa18.58■□□□□ 0.56
PPP1R3F-204ENST00000471261 METP08581 1390 aa18.56■□□□□ 0.56
PPP1R3F-204ENST00000471261 NRXN3Q9Y4C0 1643 aa18.56■□□□□ 0.56
PPP1R3F-204ENST00000471261 CHD2O14647 1828 aaKnown RBP18.56■□□□□ 0.56
PPP1R3F-204ENST00000471261 XIRP1Q702N8 1843 aaKnown RBP18.55■□□□□ 0.56
PPP1R3F-204ENST00000471261 ALKQ9UM73 1620 aa18.55■□□□□ 0.56
PPP1R3F-204ENST00000471261 SPATA31E1Q6ZUB1 1445 aa18.55■□□□□ 0.56
PPP1R3F-204ENST00000471261 PTPRUQ92729 1446 aa18.55■□□□□ 0.56
PPP1R3F-204ENST00000471261 MSH6P52701 1360 aa18.55■□□□□ 0.56
PPP1R3F-204ENST00000471261 HSPA1LP34931 641 aa18.54■□□□□ 0.56
PPP1R3F-204ENST00000471261 ADGRF5Q8IZF2 1346 aa18.51■□□□□ 0.55
PPP1R3F-204ENST00000471261 ANKRD30BQ9BXX2 1392 aa18.51■□□□□ 0.55
PPP1R3F-204ENST00000471261 PPLO60437 1756 aa18.5■□□□□ 0.55
PPP1R3F-204ENST00000471261 NCOA3Q9Y6Q9 1424 aa18.48■□□□□ 0.55
PPP1R3F-204ENST00000471261 ATF3P18847 181 aa18.47■□□□□ 0.55
PPP1R3F-204ENST00000471261 C19orf44Q9H6X5 657 aa18.47■□□□□ 0.55
PPP1R3F-204ENST00000471261 SLAIN2Q9P270 581 aa18.46■□□□□ 0.55
PPP1R3F-204ENST00000471261 XRN1Q8IZH2 1706 aaKnown RBP18.46■□□□□ 0.55
PPP1R3F-204ENST00000471261 CADPS2Q86UW7 1296 aa18.44■□□□□ 0.54
PPP1R3F-204ENST00000471261 FAM135BQ49AJ0 1406 aa18.43■□□□□ 0.54
PPP1R3F-204ENST00000471261 STK26Q9P289 416 aa18.42■□□□□ 0.54
PPP1R3F-204ENST00000471261 PIK3C2GO75747 1445 aa18.41■□□□□ 0.54
PPP1R3F-204ENST00000471261 SETD1AO15047 1707 aaKnown RBP18.41■□□□□ 0.54
PPP1R3F-204ENST00000471261 IFT172Q9UG01 1749 aa18.41■□□□□ 0.54
PPP1R3F-204ENST00000471261 TMEM132EQ6IEE7 984 aa18.41■□□□□ 0.54
PPP1R3F-204ENST00000471261 KDM2AQ9Y2K7 1162 aa18.41■□□□□ 0.54
PPP1R3F-204ENST00000471261 ROBO2Q9HCK4 1378 aa18.41■□□□□ 0.54
PPP1R3F-204ENST00000471261 DCAF11Q8TEB1 546 aa18.4■□□□□ 0.54
PPP1R3F-204ENST00000471261 DISP3Q9P2K9 1392 aa18.4■□□□□ 0.54
PPP1R3F-204ENST00000471261 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.4■□□□□ 0.54
PPP1R3F-204ENST00000471261 PTCH1Q13635 1447 aa18.4■□□□□ 0.54
PPP1R3F-204ENST00000471261 ROBO1Q9Y6N7 1651 aa18.39■□□□□ 0.53
PPP1R3F-204ENST00000471261 MYOM2P54296 1465 aa18.39■□□□□ 0.53
PPP1R3F-204ENST00000471261 TRIM26Q12899 539 aaPredicted RBP18.38■□□□□ 0.53
PPP1R3F-204ENST00000471261 CFAP70Q5T0N1 1121 aa18.37■□□□□ 0.53
PPP1R3F-204ENST00000471261 ADGRL3Q9HAR2 1447 aa18.37■□□□□ 0.53
PPP1R3F-204ENST00000471261 DCCP43146 1447 aa18.36■□□□□ 0.53
PPP1R3F-204ENST00000471261 C14orf93Q9H972 538 aaKnown RBP18.36■□□□□ 0.53
PPP1R3F-204ENST00000471261 NRXN1Q9ULB1 1477 aa18.36■□□□□ 0.53
PPP1R3F-204ENST00000471261 LRPPRCP42704 1394 aaKnown RBP18.35■□□□□ 0.53
PPP1R3F-204ENST00000471261 ASXL1Q8IXJ9 1541 aa18.33■□□□□ 0.53
PPP1R3F-204ENST00000471261 PRAG1Q86YV5 1406 aa18.33■□□□□ 0.53
PPP1R3F-204ENST00000471261 WAPLQ7Z5K2 1190 aa18.33■□□□□ 0.52
PPP1R3F-204ENST00000471261 YTHDC2Q9H6S0 1430 aaKnown RBP18.32■□□□□ 0.52
PPP1R3F-204ENST00000471261 DHX57Q6P158 1386 aaKnown RBP18.32■□□□□ 0.52
PPP1R3F-204ENST00000471261 BRINP3Q76B58 766 aa18.32■□□□□ 0.52
PPP1R3F-204ENST00000471261 NALCNQ8IZF0 1738 aa18.32■□□□□ 0.52
PPP1R3F-204ENST00000471261 MST1RQ04912 1400 aa18.32■□□□□ 0.52
PPP1R3F-204ENST00000471261 ABCC11Q96J66 1382 aa18.31■□□□□ 0.52
PPP1R3F-204ENST00000471261 STAC3Q96MF2 364 aa18.3■□□□□ 0.52
PPP1R3F-204ENST00000471261 TECPR2O15040 1411 aa18.3■□□□□ 0.52
PPP1R3F-204ENST00000471261 PLEKHH1Q9ULM0 1364 aa18.29■□□□□ 0.52
PPP1R3F-204ENST00000471261 LAMC1P11047 1609 aa18.28■□□□□ 0.52
PPP1R3F-204ENST00000471261 PHLPP1O60346 1717 aa18.27■□□□□ 0.52
PPP1R3F-204ENST00000471261 MED1Q15648 1581 aaPredicted RBP18.27■□□□□ 0.52
PPP1R3F-204ENST00000471261 NEUROD1Q13562 356 aa18.27■□□□□ 0.52
PPP1R3F-204ENST00000471261 SIN3AQ96ST3 1273 aa18.27■□□□□ 0.52
PPP1R3F-204ENST00000471261 SAFB2Q14151 953 aaKnown RBP eCLIP18.26■□□□□ 0.51
PPP1R3F-204ENST00000471261 C1orf167Q5SNV9 1468 aa18.26■□□□□ 0.51
PPP1R3F-204ENST00000471261 PRAM1Q96QH2 718 aa18.25■□□□□ 0.51
PPP1R3F-204ENST00000471261 PHF23Q9BUL5 403 aaPredicted RBP18.25■□□□□ 0.51
PPP1R3F-204ENST00000471261 TRAK1Q9UPV9 953 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms