RNA–Protein interactions for RNA: ENST00000471226.5

ABCF3-208, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 5

Gene ABCF3, Length 650 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-208ENST00000471226 ZNF335Q9H4Z2 1342 aaPredicted RBP22.55■■□□□ 1.2
ABCF3-208ENST00000471226 FOXD1Q16676 465 aa22.54■■□□□ 1.2
ABCF3-208ENST00000471226 CERKQ8TCT0 537 aa22.53■■□□□ 1.2
ABCF3-208ENST00000471226 HDGFP51858 240 aaKnown RBP22.51■■□□□ 1.19
ABCF3-208ENST00000471226 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.49■■□□□ 1.19
ABCF3-208ENST00000471226 STRCP1A6NGW2 1772 aa22.48■■□□□ 1.19
ABCF3-208ENST00000471226 PLEKHG1Q9ULL1 1385 aa22.48■■□□□ 1.19
ABCF3-208ENST00000471226 CPS1P31327 1500 aa22.45■■□□□ 1.18
ABCF3-208ENST00000471226 CCDC144AA2RUR9 1427 aa22.44■■□□□ 1.18
ABCF3-208ENST00000471226 IQSEC2Q5JU85 1478 aa22.44■■□□□ 1.18
ABCF3-208ENST00000471226 NEXMIFQ5QGS0 1516 aa22.44■■□□□ 1.18
ABCF3-208ENST00000471226 PPP1R15AO75807 674 aaPredicted RBP22.43■■□□□ 1.18
ABCF3-208ENST00000471226 ZNF326Q5BKZ1 582 aaKnown RBP22.43■■□□□ 1.18
ABCF3-208ENST00000471226 NUTM2DQ5VT03 806 aaPredicted RBP22.42■■□□□ 1.18
ABCF3-208ENST00000471226 SLC26A8Q96RN1 970 aa22.41■■□□□ 1.18
ABCF3-208ENST00000471226 TRIM26Q12899 539 aaPredicted RBP22.4■■□□□ 1.18
ABCF3-208ENST00000471226 FBXO41Q8TF61 875 aa22.4■■□□□ 1.18
ABCF3-208ENST00000471226 PPLO60437 1756 aa22.4■■□□□ 1.18
ABCF3-208ENST00000471226 CHD2O14647 1828 aaKnown RBP22.39■■□□□ 1.17
ABCF3-208ENST00000471226 SPATA31E1Q6ZUB1 1445 aa22.39■■□□□ 1.17
ABCF3-208ENST00000471226 ADAMTS13Q76LX8 1427 aa22.39■■□□□ 1.17
ABCF3-208ENST00000471226 NRXN3Q9Y4C0 1643 aa22.39■■□□□ 1.17
ABCF3-208ENST00000471226 RPGRIP1LQ68CZ1 1315 aa22.38■■□□□ 1.17
ABCF3-208ENST00000471226 BCANQ96GW7 911 aa22.38■■□□□ 1.17
ABCF3-208ENST00000471226 DIP2AQ14689 1571 aa22.38■■□□□ 1.17
ABCF3-208ENST00000471226 ANKRD30BQ9BXX2 1392 aa22.38■■□□□ 1.17
ABCF3-208ENST00000471226 TBX22Q9Y458 520 aa22.37■■□□□ 1.17
ABCF3-208ENST00000471226 SETBP1Q9Y6X0 1596 aa22.37■■□□□ 1.17
ABCF3-208ENST00000471226 IFT172Q9UG01 1749 aa22.36■■□□□ 1.17
ABCF3-208ENST00000471226 NWD1Q149M9 1564 aa22.35■■□□□ 1.17
ABCF3-208ENST00000471226 SENP3Q9H4L4 574 aaPredicted RBP22.35■■□□□ 1.17
ABCF3-208ENST00000471226 KCNA6P17658 529 aa22.34■■□□□ 1.17
ABCF3-208ENST00000471226 LRRC7Q96NW7 1537 aa22.34■■□□□ 1.17
ABCF3-208ENST00000471226 XIRP1Q702N8 1843 aaKnown RBP22.34■■□□□ 1.17
ABCF3-208ENST00000471226 VGFO15240 615 aaPredicted RBP22.32■■□□□ 1.16
ABCF3-208ENST00000471226 PIK3R4Q99570 1358 aa22.3■■□□□ 1.16
ABCF3-208ENST00000471226 RGL3Q3MIN7 710 aa22.3■■□□□ 1.16
ABCF3-208ENST00000471226 NKTRP30414 1462 aaKnown RBP22.28■■□□□ 1.16
ABCF3-208ENST00000471226 SETD1AO15047 1707 aaKnown RBP22.28■■□□□ 1.16
ABCF3-208ENST00000471226 ALKQ9UM73 1620 aa22.24■■□□□ 1.15
ABCF3-208ENST00000471226 PTPRUQ92729 1446 aa22.23■■□□□ 1.15
ABCF3-208ENST00000471226 ADGRF5Q8IZF2 1346 aa22.23■■□□□ 1.15
ABCF3-208ENST00000471226 METP08581 1390 aa22.23■■□□□ 1.15
ABCF3-208ENST00000471226 XRN1Q8IZH2 1706 aaKnown RBP22.23■■□□□ 1.15
ABCF3-208ENST00000471226 PROSER2Q86WR7 435 aaPredicted RBP22.22■■□□□ 1.15
ABCF3-208ENST00000471226 TMEM94Q12767 1356 aa22.21■■□□□ 1.15
ABCF3-208ENST00000471226 UBAP1LF5GYI3 381 aa22.2■■□□□ 1.14
ABCF3-208ENST00000471226 AMOTL2Q9Y2J4 779 aa22.2■■□□□ 1.14
ABCF3-208ENST00000471226 MYOM2P54296 1465 aa22.19■■□□□ 1.14
ABCF3-208ENST00000471226 NRXN1Q9ULB1 1477 aa22.18■■□□□ 1.14
ABCF3-208ENST00000471226 PIK3C2GO75747 1445 aa22.17■■□□□ 1.14
ABCF3-208ENST00000471226 DHX57Q6P158 1386 aaKnown RBP22.16■■□□□ 1.14
ABCF3-208ENST00000471226 TOM1O60784 492 aa22.16■■□□□ 1.14
ABCF3-208ENST00000471226 NCOA3Q9Y6Q9 1424 aa22.15■■□□□ 1.14
ABCF3-208ENST00000471226 RBM33Q96EV2 1170 aaKnown RBP22.15■■□□□ 1.14
ABCF3-208ENST00000471226 LAMC1P11047 1609 aa22.12■■□□□ 1.13
ABCF3-208ENST00000471226 PRAG1Q86YV5 1406 aa22.12■■□□□ 1.13
ABCF3-208ENST00000471226 STAC3Q96MF2 364 aa22.11■■□□□ 1.13
ABCF3-208ENST00000471226 C14orf93Q9H972 538 aaKnown RBP22.1■■□□□ 1.13
ABCF3-208ENST00000471226 ASXL1Q8IXJ9 1541 aa22.1■■□□□ 1.13
ABCF3-208ENST00000471226 DCAF11Q8TEB1 546 aa22.09■■□□□ 1.13
ABCF3-208ENST00000471226 MSH6P52701 1360 aa22.09■■□□□ 1.13
ABCF3-208ENST00000471226 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.09■■□□□ 1.13
ABCF3-208ENST00000471226 PTCH1Q13635 1447 aa22.08■■□□□ 1.13
ABCF3-208ENST00000471226 KNDC1Q76NI1 1749 aa22.06■■□□□ 1.12
ABCF3-208ENST00000471226 PIP4K2BP78356 416 aa22.06■■□□□ 1.12
ABCF3-208ENST00000471226 KDM2AQ9Y2K7 1162 aa22.06■■□□□ 1.12
ABCF3-208ENST00000471226 CFAP70Q5T0N1 1121 aa22.05■■□□□ 1.12
ABCF3-208ENST00000471226 SIN3AQ96ST3 1273 aa22.05■■□□□ 1.12
ABCF3-208ENST00000471226 ROBO2Q9HCK4 1378 aa22.04■■□□□ 1.12
ABCF3-208ENST00000471226 TMEM132EQ6IEE7 984 aa22.04■■□□□ 1.12
ABCF3-208ENST00000471226 C19orf44Q9H6X5 657 aa22.04■■□□□ 1.12
ABCF3-208ENST00000471226 TECPR2O15040 1411 aa22.04■■□□□ 1.12
ABCF3-208ENST00000471226 NALCNQ8IZF0 1738 aa22.03■■□□□ 1.12
ABCF3-208ENST00000471226 LRPPRCP42704 1394 aaKnown RBP22.03■■□□□ 1.12
ABCF3-208ENST00000471226 SCAF1Q9H7N4 1312 aaKnown RBP22.03■■□□□ 1.12
ABCF3-208ENST00000471226 ABCC11Q96J66 1382 aa22.02■■□□□ 1.12
ABCF3-208ENST00000471226 C14orf37Q86TY3 774 aa22.02■■□□□ 1.12
ABCF3-208ENST00000471226 PCGF6Q9BYE7 350 aa22.02■■□□□ 1.12
ABCF3-208ENST00000471226 YTHDC2Q9H6S0 1430 aaKnown RBP22.01■■□□□ 1.11
ABCF3-208ENST00000471226 DCCP43146 1447 aa22■■□□□ 1.11
ABCF3-208ENST00000471226 ADGRL3Q9HAR2 1447 aa22■■□□□ 1.11
ABCF3-208ENST00000471226 ADGRB1O14514 1584 aa21.99■■□□□ 1.11
ABCF3-208ENST00000471226 FAM135BQ49AJ0 1406 aa21.99■■□□□ 1.11
ABCF3-208ENST00000471226 KIAA1210Q9ULL0 1709 aa21.99■■□□□ 1.11
ABCF3-208ENST00000471226 CADPS2Q86UW7 1296 aa21.98■■□□□ 1.11
ABCF3-208ENST00000471226 STK26Q9P289 416 aa21.98■■□□□ 1.11
ABCF3-208ENST00000471226 ROBO1Q9Y6N7 1651 aa21.98■■□□□ 1.11
ABCF3-208ENST00000471226 ATF3P18847 181 aa21.97■■□□□ 1.11
ABCF3-208ENST00000471226 NEUROD1Q13562 356 aa21.97■■□□□ 1.11
ABCF3-208ENST00000471226 L3MBTL2Q969R5 705 aa21.97■■□□□ 1.11
ABCF3-208ENST00000471226 SLAIN2Q9P270 581 aa21.97■■□□□ 1.11
ABCF3-208ENST00000471226 SIRT1Q96EB6 747 aa21.96■■□□□ 1.11
ABCF3-208ENST00000471226 HSPA1LP34931 641 aa21.95■■□□□ 1.1
ABCF3-208ENST00000471226 WAPLQ7Z5K2 1190 aa21.93■■□□□ 1.1
ABCF3-208ENST00000471226 DLC1Q96QB1 1528 aa21.93■■□□□ 1.1
ABCF3-208ENST00000471226 MST1RQ04912 1400 aa21.91■■□□□ 1.1
ABCF3-208ENST00000471226 PLEKHH1Q9ULM0 1364 aa21.91■■□□□ 1.1
ABCF3-208ENST00000471226 CDC42BPGQ6DT37 1551 aa21.89■■□□□ 1.09
ABCF3-208ENST00000471226 ARHGEF28Q8N1W1 1705 aaKnown RBP21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms