RNA–Protein interactions for RNA: ENST00000470600.1

TGFBR3-206, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 2

Gene TGFBR3, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-206ENST00000470600 LTBP4Q8N2S1 1624 aa12.97□□□□□ -0.33
TGFBR3-206ENST00000470600 SCAF11Q99590 1463 aaKnown RBP12.97□□□□□ -0.33
TGFBR3-206ENST00000470600 LTKP29376 864 aa12.96□□□□□ -0.33
TGFBR3-206ENST00000470600 SETBP1Q9Y6X0 1596 aa12.95□□□□□ -0.34
TGFBR3-206ENST00000470600 TRIM52Q96A61 297 aa12.95□□□□□ -0.34
TGFBR3-206ENST00000470600 NRXN1Q9ULB1 1477 aa12.94□□□□□ -0.34
TGFBR3-206ENST00000470600 ADAMTS13Q76LX8 1427 aa12.94□□□□□ -0.34
TGFBR3-206ENST00000470600 RIMS2Q9UQ26 1411 aa12.94□□□□□ -0.34
TGFBR3-206ENST00000470600 ACIN1Q9UKV3 1341 aaKnown RBP12.93□□□□□ -0.34
TGFBR3-206ENST00000470600 ADRA2BP18089 450 aa12.93□□□□□ -0.34
TGFBR3-206ENST00000470600 NWD1Q149M9 1564 aa12.93□□□□□ -0.34
TGFBR3-206ENST00000470600 ASXL1Q8IXJ9 1541 aa12.93□□□□□ -0.34
TGFBR3-206ENST00000470600 NCKAP5LQ9HCH0 1330 aa12.92□□□□□ -0.34
TGFBR3-206ENST00000470600 NPHP4O75161 1426 aaPredicted RBP12.91□□□□□ -0.34
TGFBR3-206ENST00000470600 XIRP1Q702N8 1843 aaKnown RBP12.91□□□□□ -0.34
TGFBR3-206ENST00000470600 CCDC144AA2RUR9 1427 aa12.9□□□□□ -0.34
TGFBR3-206ENST00000470600 XRN1Q8IZH2 1706 aaKnown RBP12.9□□□□□ -0.34
TGFBR3-206ENST00000470600 THEMISQ8N1K5 641 aaPredicted RBP12.89□□□□□ -0.35
TGFBR3-206ENST00000470600 CHD2O14647 1828 aaKnown RBP12.89□□□□□ -0.35
TGFBR3-206ENST00000470600 PLEKHG1Q9ULL1 1385 aa12.89□□□□□ -0.35
TGFBR3-206ENST00000470600 MYOM2P54296 1465 aa12.89□□□□□ -0.35
TGFBR3-206ENST00000470600 DIP2AQ14689 1571 aa12.89□□□□□ -0.35
TGFBR3-206ENST00000470600 ALKQ9UM73 1620 aa12.88□□□□□ -0.35
TGFBR3-206ENST00000470600 PIK3C2GO75747 1445 aa12.87□□□□□ -0.35
TGFBR3-206ENST00000470600 PRAG1Q86YV5 1406 aa12.87□□□□□ -0.35
TGFBR3-206ENST00000470600 PTPRUQ92729 1446 aa12.86□□□□□ -0.35
TGFBR3-206ENST00000470600 PCGF6Q9BYE7 350 aa12.85□□□□□ -0.35
TGFBR3-206ENST00000470600 ADGRB1O14514 1584 aa12.84□□□□□ -0.35
TGFBR3-206ENST00000470600 ANKLE2Q86XL3 938 aa12.83□□□□□ -0.36
TGFBR3-206ENST00000470600 TXNDC2Q86VQ3 553 aa12.82□□□□□ -0.36
TGFBR3-206ENST00000470600 ADGRF5Q8IZF2 1346 aa12.82□□□□□ -0.36
TGFBR3-206ENST00000470600 ZNF335Q9H4Z2 1342 aaPredicted RBP12.82□□□□□ -0.36
TGFBR3-206ENST00000470600 KNDC1Q76NI1 1749 aa12.82□□□□□ -0.36
TGFBR3-206ENST00000470600 LAMC1P11047 1609 aa12.8□□□□□ -0.36
TGFBR3-206ENST00000470600 LRRC7Q96NW7 1537 aa12.8□□□□□ -0.36
TGFBR3-206ENST00000470600 RPGRIP1LQ68CZ1 1315 aa12.8□□□□□ -0.36
TGFBR3-206ENST00000470600 METP08581 1390 aa12.8□□□□□ -0.36
TGFBR3-206ENST00000470600 KIAA1210Q9ULL0 1709 aa12.79□□□□□ -0.36
TGFBR3-206ENST00000470600 NUTM2DQ5VT03 806 aaPredicted RBP12.79□□□□□ -0.36
TGFBR3-206ENST00000470600 SIN3AQ96ST3 1273 aa12.79□□□□□ -0.36
TGFBR3-206ENST00000470600 NKTRP30414 1462 aaKnown RBP12.78□□□□□ -0.36
TGFBR3-206ENST00000470600 CPS1P31327 1500 aa12.78□□□□□ -0.36
TGFBR3-206ENST00000470600 TRPM1Q7Z4N2 1603 aa12.77□□□□□ -0.36
TGFBR3-206ENST00000470600 TECPR2O15040 1411 aa12.77□□□□□ -0.37
TGFBR3-206ENST00000470600 CHGAP10645 457 aaKnown RBP12.76□□□□□ -0.37
TGFBR3-206ENST00000470600 TBX22Q9Y458 520 aa12.76□□□□□ -0.37
TGFBR3-206ENST00000470600 PIK3R4Q99570 1358 aa12.76□□□□□ -0.37
TGFBR3-206ENST00000470600 IQSEC2Q5JU85 1478 aa12.76□□□□□ -0.37
TGFBR3-206ENST00000470600 NALCNQ8IZF0 1738 aa12.76□□□□□ -0.37
TGFBR3-206ENST00000470600 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.75□□□□□ -0.37
TGFBR3-206ENST00000470600 SLC26A8Q96RN1 970 aa12.75□□□□□ -0.37
TGFBR3-206ENST00000470600 STAG3Q9UJ98 1225 aa12.74□□□□□ -0.37
TGFBR3-206ENST00000470600 DMRT2Q9Y5R5 561 aa12.74□□□□□ -0.37
TGFBR3-206ENST00000470600 ARHGEF28Q8N1W1 1705 aaKnown RBP12.74□□□□□ -0.37
TGFBR3-206ENST00000470600 PTCH1Q13635 1447 aa12.73□□□□□ -0.37
TGFBR3-206ENST00000470600 RGL3Q3MIN7 710 aa12.73□□□□□ -0.37
TGFBR3-206ENST00000470600 EID1Q9Y6B2 187 aa12.73□□□□□ -0.37
TGFBR3-206ENST00000470600 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.73□□□□□ -0.37
TGFBR3-206ENST00000470600 ZNF326Q5BKZ1 582 aaKnown RBP12.71□□□□□ -0.37
TGFBR3-206ENST00000470600 L3MBTL2Q969R5 705 aa12.71□□□□□ -0.37
TGFBR3-206ENST00000470600 DLC1Q96QB1 1528 aa12.71□□□□□ -0.38
TGFBR3-206ENST00000470600 ROBO2Q9HCK4 1378 aa12.7□□□□□ -0.38
TGFBR3-206ENST00000470600 CLSPNQ9HAW4 1339 aa12.7□□□□□ -0.38
TGFBR3-206ENST00000470600 KCNA6P17658 529 aa12.7□□□□□ -0.38
TGFBR3-206ENST00000470600 C14orf93Q9H972 538 aaKnown RBP12.7□□□□□ -0.38
TGFBR3-206ENST00000470600 VGFO15240 615 aaPredicted RBP12.69□□□□□ -0.38
TGFBR3-206ENST00000470600 LRPPRCP42704 1394 aaKnown RBP12.69□□□□□ -0.38
TGFBR3-206ENST00000470600 GPRASP1Q5JY77 1395 aa12.69□□□□□ -0.38
TGFBR3-206ENST00000470600 NBPF8Q3BBV2 869 aa12.68□□□□□ -0.38
TGFBR3-206ENST00000470600 YTHDC2Q9H6S0 1430 aaKnown RBP12.68□□□□□ -0.38
TGFBR3-206ENST00000470600 RALGAPBQ86X10 1494 aa12.67□□□□□ -0.38
TGFBR3-206ENST00000470600 CFAP70Q5T0N1 1121 aa12.67□□□□□ -0.38
TGFBR3-206ENST00000470600 ADGRB2O60241 1585 aa12.67□□□□□ -0.38
TGFBR3-206ENST00000470600 TMEM94Q12767 1356 aa12.67□□□□□ -0.38
TGFBR3-206ENST00000470600 ABCC11Q96J66 1382 aa12.67□□□□□ -0.38
TGFBR3-206ENST00000470600 PPP1R15AO75807 674 aaPredicted RBP12.66□□□□□ -0.38
TGFBR3-206ENST00000470600 CERKQ8TCT0 537 aa12.66□□□□□ -0.38
TGFBR3-206ENST00000470600 DCAF11Q8TEB1 546 aa12.66□□□□□ -0.38
TGFBR3-206ENST00000470600 PLEKHH1Q9ULM0 1364 aa12.66□□□□□ -0.38
TGFBR3-206ENST00000470600 NCOA3Q9Y6Q9 1424 aa12.65□□□□□ -0.38
TGFBR3-206ENST00000470600 HDGFP51858 240 aaKnown RBP12.65□□□□□ -0.38
TGFBR3-206ENST00000470600 CDC42BPGQ6DT37 1551 aa12.64□□□□□ -0.39
TGFBR3-206ENST00000470600 USP32Q8NFA0 1604 aa12.64□□□□□ -0.39
TGFBR3-206ENST00000470600 STAC3Q96MF2 364 aa12.64□□□□□ -0.39
TGFBR3-206ENST00000470600 FAM135BQ49AJ0 1406 aa12.63□□□□□ -0.39
TGFBR3-206ENST00000470600 ADGRL3Q9HAR2 1447 aa12.63□□□□□ -0.39
TGFBR3-206ENST00000470600 NBPF1Q3BBV0 1214 aa12.63□□□□□ -0.39
TGFBR3-206ENST00000470600 TMEM132EQ6IEE7 984 aa12.63□□□□□ -0.39
TGFBR3-206ENST00000470600 AMOTL2Q9Y2J4 779 aa12.63□□□□□ -0.39
TGFBR3-206ENST00000470600 FMN2Q9NZ56 1722 aa12.62□□□□□ -0.39
TGFBR3-206ENST00000470600 DCCP43146 1447 aa12.62□□□□□ -0.39
TGFBR3-206ENST00000470600 NEUROD1Q13562 356 aa12.61□□□□□ -0.39
TGFBR3-206ENST00000470600 RBM33Q96EV2 1170 aaKnown RBP12.61□□□□□ -0.39
TGFBR3-206ENST00000470600 KDM2AQ9Y2K7 1162 aa12.6□□□□□ -0.39
TGFBR3-206ENST00000470600 MST1RQ04912 1400 aa12.6□□□□□ -0.39
TGFBR3-206ENST00000470600 QRICH2Q9H0J4 1663 aa12.59□□□□□ -0.39
TGFBR3-206ENST00000470600 TULP4Q9NRJ4 1543 aa12.58□□□□□ -0.4
TGFBR3-206ENST00000470600 TOPAZ1Q8N9V7 1692 aa12.58□□□□□ -0.4
TGFBR3-206ENST00000470600 SIRT1Q96EB6 747 aa12.58□□□□□ -0.4
TGFBR3-206ENST00000470600 RGPD8O14715 1765 aaPredicted RBP12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms