RNA–Protein interactions for RNA: ENST00000470432.5

ECM1-204, Transcript of extracellular matrix protein 1, humanhuman

TSL 2

Gene ECM1, Length 3,066 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-204ENST00000470432 RNF17Q9BXT8 1623 aaKnown RBP15.84■□□□□ 0.13
ECM1-204ENST00000470432 ZNF521Q96K83 1311 aa15.83■□□□□ 0.12
ECM1-204ENST00000470432 SYCP2Q9BX26 1530 aa15.83■□□□□ 0.12
ECM1-204ENST00000470432 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.82■□□□□ 0.12
ECM1-204ENST00000470432 ARAP3Q8WWN8 1544 aa15.82■□□□□ 0.12
ECM1-204ENST00000470432 PLEKHH1Q9ULM0 1364 aa15.82■□□□□ 0.12
ECM1-204ENST00000470432 PLXNC1O60486 1568 aa15.82■□□□□ 0.12
ECM1-204ENST00000470432 PPP2R1AP30153 589 aa15.82■□□□□ 0.12
ECM1-204ENST00000470432 FAM161AQ3B820 660 aa15.82■□□□□ 0.12
ECM1-204ENST00000470432 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.82■□□□□ 0.12
ECM1-204ENST00000470432 WDR43Q15061 677 aaKnown RBP eCLIP15.81■□□□□ 0.12
ECM1-204ENST00000470432 KNSTRNQ9Y448 316 aa15.81■□□□□ 0.12
ECM1-204ENST00000470432 MAGI2Q86UL8 1455 aa15.81■□□□□ 0.12
ECM1-204ENST00000470432 CFAP74Q9C0B2 1584 aa15.81■□□□□ 0.12
ECM1-204ENST00000470432 GOLGA2Q08379 1002 aa15.81■□□□□ 0.12
ECM1-204ENST00000470432 GSE1Q14687 1217 aa15.81■□□□□ 0.12
ECM1-204ENST00000470432 NFKBIBQ15653 356 aa15.81■□□□□ 0.12
ECM1-204ENST00000470432 DAXXQ9UER7 740 aaPredicted RBP15.8■□□□□ 0.12
ECM1-204ENST00000470432 C8orf34Q49A92 452 aa15.79■□□□□ 0.12
ECM1-204ENST00000470432 AMER1Q5JTC6 1135 aaPredicted RBP15.79■□□□□ 0.12
ECM1-204ENST00000470432 ARHGAP5Q13017 1502 aa15.78■□□□□ 0.12
ECM1-204ENST00000470432 DUOX2Q9NRD8 1548 aa15.78■□□□□ 0.12
ECM1-204ENST00000470432 SLFN5Q08AF3 891 aa15.77■□□□□ 0.11
ECM1-204ENST00000470432 CDCA8Q53HL2 280 aa15.77■□□□□ 0.11
ECM1-204ENST00000470432 PPRC1Q5VV67 1664 aaKnown RBP15.77■□□□□ 0.11
ECM1-204ENST00000470432 SYNMO15061 1565 aa15.77■□□□□ 0.11
ECM1-204ENST00000470432 PIK3C2GO75747 1445 aa15.76■□□□□ 0.11
ECM1-204ENST00000470432 IQGAP1P46940 1657 aa15.76■□□□□ 0.11
ECM1-204ENST00000470432 TRMT2AQ8IZ69 625 aaKnown RBP15.76■□□□□ 0.11
ECM1-204ENST00000470432 SLC4A3P48751 1232 aa15.76■□□□□ 0.11
ECM1-204ENST00000470432 ANO8Q9HCE9 1232 aaPredicted RBP15.76■□□□□ 0.11
ECM1-204ENST00000470432 TTC37Q6PGP7 1564 aa15.75■□□□□ 0.11
ECM1-204ENST00000470432 EIF3AQ14152 1382 aaKnown RBP15.75■□□□□ 0.11
ECM1-204ENST00000470432 ASXL1Q8IXJ9 1541 aa15.74■□□□□ 0.11
ECM1-204ENST00000470432 NPC1L1Q9UHC9 1359 aa15.74■□□□□ 0.11
ECM1-204ENST00000470432 RTN4Q9NQC3 1192 aaKnown RBP15.74■□□□□ 0.11
ECM1-204ENST00000470432 MADDQ8WXG6 1647 aa15.74■□□□□ 0.11
ECM1-204ENST00000470432 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.74■□□□□ 0.11
ECM1-204ENST00000470432 NEO1Q92859 1461 aa15.72■□□□□ 0.11
ECM1-204ENST00000470432 FAM69CQ0P6D2 419 aa15.72■□□□□ 0.11
ECM1-204ENST00000470432 STAC3Q96MF2 364 aa15.72■□□□□ 0.11
ECM1-204ENST00000470432 NKTRP30414 1462 aaKnown RBP15.71■□□□□ 0.11
ECM1-204ENST00000470432 SCAF11Q99590 1463 aaKnown RBP15.71■□□□□ 0.11
ECM1-204ENST00000470432 SCAPERQ9BY12 1400 aa15.71■□□□□ 0.11
ECM1-204ENST00000470432 FRAT1Q92837 279 aaPredicted RBP15.7■□□□□ 0.1
ECM1-204ENST00000470432 CD109Q6YHK3 1445 aa15.7■□□□□ 0.1
ECM1-204ENST00000470432 TRHP20396 242 aaPredicted RBP15.7■□□□□ 0.1
ECM1-204ENST00000470432 RGS3P49796 1198 aa15.69■□□□□ 0.1
ECM1-204ENST00000470432 BRPF3Q9ULD4 1205 aa15.69■□□□□ 0.1
ECM1-204ENST00000470432 SPHKAPQ2M3C7 1700 aa15.69■□□□□ 0.1
ECM1-204ENST00000470432 MYOM1P52179 1685 aa15.68■□□□□ 0.1
ECM1-204ENST00000470432 E9PSI1 815 aa15.68■□□□□ 0.1
ECM1-204ENST00000470432 NGEFQ8N5V2 710 aa15.68■□□□□ 0.1
ECM1-204ENST00000470432 SPINK5Q9NQ38 1064 aaPredicted RBP15.67■□□□□ 0.1
ECM1-204ENST00000470432 VIRMAQ69YN4 1812 aaKnown RBP15.67■□□□□ 0.1
ECM1-204ENST00000470432 CCDC146Q8IYE0 955 aa15.66■□□□□ 0.1
ECM1-204ENST00000470432 PLCH2O75038 1416 aa15.66■□□□□ 0.1
ECM1-204ENST00000470432 APAF1O14727 1248 aa15.66■□□□□ 0.1
ECM1-204ENST00000470432 TRPM2O94759 1503 aa15.66■□□□□ 0.1
ECM1-204ENST00000470432 CEP152O94986 1710 aa15.66■□□□□ 0.1
ECM1-204ENST00000470432 BCAR3O75815 825 aa15.65■□□□□ 0.1
ECM1-204ENST00000470432 FRAT2O75474 233 aaPredicted RBP15.65■□□□□ 0.1
ECM1-204ENST00000470432 TSPOAP1O95153 1857 aa15.65■□□□□ 0.1
ECM1-204ENST00000470432 CGNL1Q0VF96 1302 aa15.64■□□□□ 0.09
ECM1-204ENST00000470432 PDE3AQ14432 1141 aa15.64■□□□□ 0.09
ECM1-204ENST00000470432 KDM5AP29375 1690 aaKnown RBP15.64■□□□□ 0.09
ECM1-204ENST00000470432 PTPRTO14522 1441 aa15.63■□□□□ 0.09
ECM1-204ENST00000470432 NINLQ9Y2I6 1382 aa15.63■□□□□ 0.09
ECM1-204ENST00000470432 SLC24A1O60721 1099 aa15.63■□□□□ 0.09
ECM1-204ENST00000470432 KIAA1210Q9ULL0 1709 aa15.62■□□□□ 0.09
ECM1-204ENST00000470432 IGHDP01880 384 aa15.62■□□□□ 0.09
ECM1-204ENST00000470432 USP19O94966 1318 aa15.61■□□□□ 0.09
ECM1-204ENST00000470432 MAPK8IP3Q9UPT6 1336 aa15.61■□□□□ 0.09
ECM1-204ENST00000470432 PRKCSHP14314 528 aaPredicted RBP15.61■□□□□ 0.09
ECM1-204ENST00000470432 EFCAB2Q5VUJ9 269 aa15.6■□□□□ 0.09
ECM1-204ENST00000470432 CLTCL1P53675 1640 aa15.6■□□□□ 0.09
ECM1-204ENST00000470432 CLUAP1Q96AJ1 413 aa15.59■□□□□ 0.09
ECM1-204ENST00000470432 ABCC1P33527 1531 aa15.59■□□□□ 0.09
ECM1-204ENST00000470432 FANCAO15360 1455 aa15.59■□□□□ 0.09
ECM1-204ENST00000470432 CENPJQ9HC77 1338 aaPredicted RBP15.58■□□□□ 0.09
ECM1-204ENST00000470432 DMRT2Q9Y5R5 561 aa15.58■□□□□ 0.08
ECM1-204ENST00000470432 NEURL4Q96JN8 1562 aa15.57■□□□□ 0.08
ECM1-204ENST00000470432 TRAPPC8Q9Y2L5 1435 aa15.57■□□□□ 0.08
ECM1-204ENST00000470432 BECN1Q14457 450 aa15.57■□□□□ 0.08
ECM1-204ENST00000470432 AAMPQ13685 434 aa15.57■□□□□ 0.08
ECM1-204ENST00000470432 POLR3AO14802 1390 aaPredicted RBP15.56■□□□□ 0.08
ECM1-204ENST00000470432 RTEL1-TNFRSF6BF6WH68 1400 aa15.56■□□□□ 0.08
ECM1-204ENST00000470432 ERVK-7P63135 1459 aa15.56■□□□□ 0.08
ECM1-204ENST00000470432 WWC1Q8IX03 1113 aa15.56■□□□□ 0.08
ECM1-204ENST00000470432 DEPDC5O75140 1603 aa15.55■□□□□ 0.08
ECM1-204ENST00000470432 TET3O43151 1660 aa15.55■□□□□ 0.08
ECM1-204ENST00000470432 CARD14Q9BXL6 1004 aa15.55■□□□□ 0.08
ECM1-204ENST00000470432 CANXP27824 592 aaKnown RBP15.55■□□□□ 0.08
ECM1-204ENST00000470432 RICTORQ6R327 1708 aa15.55■□□□□ 0.08
ECM1-204ENST00000470432 COG6Q9Y2V7 657 aa15.54■□□□□ 0.08
ECM1-204ENST00000470432 SPAG9O60271 1321 aaKnown RBP15.54■□□□□ 0.08
ECM1-204ENST00000470432 SEC24BO95487 1268 aa15.54■□□□□ 0.08
ECM1-204ENST00000470432 PANK1Q8TE04 598 aa15.54■□□□□ 0.08
ECM1-204ENST00000470432 ZMYM3Q14202 1370 aa15.54■□□□□ 0.08
ECM1-204ENST00000470432 NLRP1Q9C000 1473 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms