RNA–Protein interactions for RNA: ENST00000470180.2

C1orf43-207, Transcript of chromosome 1 open reading frame 43, humanhuman

TSL 5

Gene C1orf43, Length 1,861 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf43-207ENST00000470180 IDI1Q13907 227 aa23.58■■□□□ 1.36
C1orf43-207ENST00000470180 TESK2Q96S53 571 aa23.57■■□□□ 1.36
C1orf43-207ENST00000470180 FBXO31Q5XUX0 539 aaPredicted RBP23.56■■□□□ 1.36
C1orf43-207ENST00000470180 IQGAP1P46940 1657 aa23.56■■□□□ 1.36
C1orf43-207ENST00000470180 CLTCQ00610 1675 aaKnown RBP23.56■■□□□ 1.36
C1orf43-207ENST00000470180 SLC52A1Q9NWF4 448 aa23.56■■□□□ 1.36
C1orf43-207ENST00000470180 RPGRIP1LQ68CZ1 1315 aa23.55■■□□□ 1.36
C1orf43-207ENST00000470180 CFAP70Q5T0N1 1121 aa23.55■■□□□ 1.36
C1orf43-207ENST00000470180 MLECQ14165 292 aa23.54■■□□□ 1.36
C1orf43-207ENST00000470180 POLR3GLQ9BT43 218 aa23.54■■□□□ 1.36
C1orf43-207ENST00000470180 ERVK-7P63135 1459 aa23.51■■□□□ 1.35
C1orf43-207ENST00000470180 TRHP20396 242 aaPredicted RBP23.51■■□□□ 1.35
C1orf43-207ENST00000470180 SCAF11Q99590 1463 aaKnown RBP23.51■■□□□ 1.35
C1orf43-207ENST00000470180 MYO5BQ9ULV0 1848 aa23.48■■□□□ 1.35
C1orf43-207ENST00000470180 TMEM131LA2VDJ0 1609 aa23.48■■□□□ 1.35
C1orf43-207ENST00000470180 DISP3Q9P2K9 1392 aa23.48■■□□□ 1.35
C1orf43-207ENST00000470180 NEXMIFQ5QGS0 1516 aa23.47■■□□□ 1.35
C1orf43-207ENST00000470180 PRKRIP1Q9H875 184 aaPredicted RBP23.47■■□□□ 1.35
C1orf43-207ENST00000470180 PIK3C2GO75747 1445 aa23.47■■□□□ 1.35
C1orf43-207ENST00000470180 DNAJC5Q9H3Z4 198 aa23.46■■□□□ 1.35
C1orf43-207ENST00000470180 C14orf93Q9H972 538 aaKnown RBP23.45■■□□□ 1.35
C1orf43-207ENST00000470180 SPATA31D1Q6ZQQ2 1576 aa23.44■■□□□ 1.34
C1orf43-207ENST00000470180 VGFO15240 615 aaPredicted RBP23.43■■□□□ 1.34
C1orf43-207ENST00000470180 TMF1P82094 1093 aa23.43■■□□□ 1.34
C1orf43-207ENST00000470180 SETBP1Q9Y6X0 1596 aa23.42■■□□□ 1.34
C1orf43-207ENST00000470180 NUTM2DQ5VT03 806 aaPredicted RBP23.42■■□□□ 1.34
C1orf43-207ENST00000470180 ZMYM3Q14202 1370 aa23.42■■□□□ 1.34
C1orf43-207ENST00000470180 ZFYVE9O95405 1425 aa23.41■■□□□ 1.34
C1orf43-207ENST00000470180 ADGRB1O14514 1584 aa23.38■■□□□ 1.33
C1orf43-207ENST00000470180 ESF1Q9H501 851 aaKnown RBP23.38■■□□□ 1.33
C1orf43-207ENST00000470180 EIF3AQ14152 1382 aaKnown RBP23.37■■□□□ 1.33
C1orf43-207ENST00000470180 CCDC184Q52MB2 194 aa23.36■■□□□ 1.33
C1orf43-207ENST00000470180 TMEM132EQ6IEE7 984 aa23.34■■□□□ 1.33
C1orf43-207ENST00000470180 A2ML1A8K2U0 1454 aa23.33■■□□□ 1.33
C1orf43-207ENST00000470180 MYO3AQ8NEV4 1616 aa23.33■■□□□ 1.32
C1orf43-207ENST00000470180 PER1O15534 1290 aaPredicted RBP23.32■■□□□ 1.32
C1orf43-207ENST00000470180 STAG3Q9UJ98 1225 aa23.31■■□□□ 1.32
C1orf43-207ENST00000470180 TRAK1Q9UPV9 953 aa23.3■■□□□ 1.32
C1orf43-207ENST00000470180 CDCA8Q53HL2 280 aa23.28■■□□□ 1.32
C1orf43-207ENST00000470180 PANK3Q9H999 370 aa23.28■■□□□ 1.32
C1orf43-207ENST00000470180 SCAF1Q9H7N4 1312 aaKnown RBP23.28■■□□□ 1.32
C1orf43-207ENST00000470180 CNGB1Q14028 1251 aaPredicted RBP23.28■■□□□ 1.32
C1orf43-207ENST00000470180 SLC24A1O60721 1099 aa23.27■■□□□ 1.32
C1orf43-207ENST00000470180 SBNO2Q9Y2G9 1366 aa23.27■■□□□ 1.32
C1orf43-207ENST00000470180 CENPJQ9HC77 1338 aaPredicted RBP23.26■■□□□ 1.31
C1orf43-207ENST00000470180 TNRQ92752 1358 aa23.25■■□□□ 1.31
C1orf43-207ENST00000470180 ASXL1Q8IXJ9 1541 aa23.24■■□□□ 1.31
C1orf43-207ENST00000470180 SENP3Q9H4L4 574 aaPredicted RBP23.24■■□□□ 1.31
C1orf43-207ENST00000470180 MRS2Q9HD23 443 aa23.24■■□□□ 1.31
C1orf43-207ENST00000470180 RIMS2Q9UQ26 1411 aa23.23■■□□□ 1.31
C1orf43-207ENST00000470180 KDM5AP29375 1690 aaKnown RBP23.22■■□□□ 1.31
C1orf43-207ENST00000470180 MYOM1P52179 1685 aa23.22■■□□□ 1.31
C1orf43-207ENST00000470180 QRICH2Q9H0J4 1663 aa23.22■■□□□ 1.31
C1orf43-207ENST00000470180 ARHGEF28Q8N1W1 1705 aaKnown RBP23.21■■□□□ 1.31
C1orf43-207ENST00000470180 ALKQ9UM73 1620 aa23.21■■□□□ 1.31
C1orf43-207ENST00000470180 KTN1Q86UP2 1357 aaKnown RBP23.2■■□□□ 1.31
C1orf43-207ENST00000470180 CEBPAP49715 358 aaPredicted RBP23.2■■□□□ 1.3
C1orf43-207ENST00000470180 RALBP1Q15311 655 aa23.19■■□□□ 1.3
C1orf43-207ENST00000470180 C3P01024 1663 aa23.18■■□□□ 1.3
C1orf43-207ENST00000470180 FER1L4A9Z1Z3 1794 aa23.17■■□□□ 1.3
C1orf43-207ENST00000470180 GTF3C3Q9Y5Q9 886 aa23.17■■□□□ 1.3
C1orf43-207ENST00000470180 PARD3Q8TEW0 1356 aa23.17■■□□□ 1.3
C1orf43-207ENST00000470180 UBR1Q8IWV7 1749 aa23.16■■□□□ 1.3
C1orf43-207ENST00000470180 STK26Q9P289 416 aa23.15■■□□□ 1.3
C1orf43-207ENST00000470180 FAM9BQ8IZU0 186 aa23.14■■□□□ 1.29
C1orf43-207ENST00000470180 YTHDC2Q9H6S0 1430 aaKnown RBP23.14■■□□□ 1.29
C1orf43-207ENST00000470180 MYBBP1AQ9BQG0 1328 aaKnown RBP23.14■■□□□ 1.29
C1orf43-207ENST00000470180 PTPRMP28827 1452 aa23.14■■□□□ 1.29
C1orf43-207ENST00000470180 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.13■■□□□ 1.29
C1orf43-207ENST00000470180 SETD1AO15047 1707 aaKnown RBP23.13■■□□□ 1.29
C1orf43-207ENST00000470180 CC2D1BQ5T0F9 858 aaKnown RBP23.12■■□□□ 1.29
C1orf43-207ENST00000470180 NRXN3Q9Y4C0 1643 aa23.11■■□□□ 1.29
C1orf43-207ENST00000470180 NLRP1Q9C000 1473 aa23.11■■□□□ 1.29
C1orf43-207ENST00000470180 TMEM2Q9UHN6 1383 aa23.1■■□□□ 1.29
C1orf43-207ENST00000470180 HNRNPUQ00839 825 aaKnown RBP eCLIP23.09■■□□□ 1.29
C1orf43-207ENST00000470180 AMER1Q5JTC6 1135 aaPredicted RBP23.09■■□□□ 1.29
C1orf43-207ENST00000470180 KNSTRNQ9Y448 316 aa23.09■■□□□ 1.29
C1orf43-207ENST00000470180 BRD4O60885 1362 aaPredicted RBP23.09■■□□□ 1.29
C1orf43-207ENST00000470180 TULP4Q9NRJ4 1543 aa23.08■■□□□ 1.29
C1orf43-207ENST00000470180 HDGFP51858 240 aaKnown RBP23.08■■□□□ 1.29
C1orf43-207ENST00000470180 TMC1Q8TDI8 760 aa23.08■■□□□ 1.29
C1orf43-207ENST00000470180 PNISRQ8TF01 805 aaKnown RBP23.08■■□□□ 1.29
C1orf43-207ENST00000470180 PUS7Q96PZ0 661 aaKnown RBP23.07■■□□□ 1.28
C1orf43-207ENST00000470180 CARD14Q9BXL6 1004 aa23.07■■□□□ 1.28
C1orf43-207ENST00000470180 EVC2Q86UK5 1308 aa23.06■■□□□ 1.28
C1orf43-207ENST00000470180 SAFB2Q14151 953 aaKnown RBP eCLIP23.06■■□□□ 1.28
C1orf43-207ENST00000470180 PRAM1Q96QH2 718 aa23.06■■□□□ 1.28
C1orf43-207ENST00000470180 NLRP13Q86W25 1043 aa23.05■■□□□ 1.28
C1orf43-207ENST00000470180 PLPPR3Q6T4P5 718 aa23.05■■□□□ 1.28
C1orf43-207ENST00000470180 LRPPRCP42704 1394 aaKnown RBP23.04■■□□□ 1.28
C1orf43-207ENST00000470180 NPC1L1Q9UHC9 1359 aa23.03■■□□□ 1.28
C1orf43-207ENST00000470180 SLC12A5Q9H2X9 1139 aa23.03■■□□□ 1.28
C1orf43-207ENST00000470180 METP08581 1390 aa23.03■■□□□ 1.28
C1orf43-207ENST00000470180 DLC1Q96QB1 1528 aa23.02■■□□□ 1.28
C1orf43-207ENST00000470180 LTKP29376 864 aa23.02■■□□□ 1.28
C1orf43-207ENST00000470180 POGKQ9P215 609 aa23.02■■□□□ 1.28
C1orf43-207ENST00000470180 ABCC11Q96J66 1382 aa23.01■■□□□ 1.27
C1orf43-207ENST00000470180 CABP2Q9NPB3 220 aa23■■□□□ 1.27
C1orf43-207ENST00000470180 MINK1Q8N4C8 1332 aaPredicted RBP22.99■■□□□ 1.27
C1orf43-207ENST00000470180 RIMS1Q86UR5 1692 aaKnown RBP22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms