RNA–Protein interactions for RNA: ENST00000469741.6

C19orf54-202, Transcript of chromosome 19 open reading frame 54, humanhuman

TSL 2

Gene C19orf54, Length 1,792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf54-202ENST00000469741 ADGRB3O60242 1522 aa22.51■■□□□ 1.19
C19orf54-202ENST00000469741 TXNDC2Q86VQ3 553 aa22.51■■□□□ 1.19
C19orf54-202ENST00000469741 TMEM2Q9UHN6 1383 aa22.51■■□□□ 1.19
C19orf54-202ENST00000469741 POLR1AO95602 1720 aaPredicted RBP22.51■■□□□ 1.19
C19orf54-202ENST00000469741 ARHGAP23Q9P227 1491 aa22.5■■□□□ 1.19
C19orf54-202ENST00000469741 SLIT1O75093 1534 aa22.48■■□□□ 1.19
C19orf54-202ENST00000469741 TRPM2O94759 1503 aa22.48■■□□□ 1.19
C19orf54-202ENST00000469741 ZNF335Q9H4Z2 1342 aaPredicted RBP22.48■■□□□ 1.19
C19orf54-202ENST00000469741 ZFYVE9O95405 1425 aa22.45■■□□□ 1.18
C19orf54-202ENST00000469741 NPHP4O75161 1426 aaPredicted RBP22.44■■□□□ 1.18
C19orf54-202ENST00000469741 SCAF11Q99590 1463 aaKnown RBP22.44■■□□□ 1.18
C19orf54-202ENST00000469741 KDM5AP29375 1690 aaKnown RBP22.43■■□□□ 1.18
C19orf54-202ENST00000469741 MED14O60244 1454 aa22.43■■□□□ 1.18
C19orf54-202ENST00000469741 DMRT2Q9Y5R5 561 aa22.43■■□□□ 1.18
C19orf54-202ENST00000469741 RIMS2Q9UQ26 1411 aa22.42■■□□□ 1.18
C19orf54-202ENST00000469741 SLC26A8Q96RN1 970 aa22.41■■□□□ 1.18
C19orf54-202ENST00000469741 IQGAP1P46940 1657 aa22.41■■□□□ 1.18
C19orf54-202ENST00000469741 RGL3Q3MIN7 710 aa22.39■■□□□ 1.17
C19orf54-202ENST00000469741 ZNF326Q5BKZ1 582 aaKnown RBP22.39■■□□□ 1.17
C19orf54-202ENST00000469741 EID1Q9Y6B2 187 aa22.38■■□□□ 1.17
C19orf54-202ENST00000469741 STRCP1A6NGW2 1772 aa22.38■■□□□ 1.17
C19orf54-202ENST00000469741 KIF1BO60333 1816 aa22.38■■□□□ 1.17
C19orf54-202ENST00000469741 L3MBTL2Q969R5 705 aa22.38■■□□□ 1.17
C19orf54-202ENST00000469741 LTBP4Q8N2S1 1624 aa22.37■■□□□ 1.17
C19orf54-202ENST00000469741 CCDC144AA2RUR9 1427 aa22.34■■□□□ 1.17
C19orf54-202ENST00000469741 NEXMIFQ5QGS0 1516 aa22.33■■□□□ 1.16
C19orf54-202ENST00000469741 BCANQ96GW7 911 aa22.33■■□□□ 1.16
C19orf54-202ENST00000469741 SPATA31E1Q6ZUB1 1445 aa22.32■■□□□ 1.16
C19orf54-202ENST00000469741 SCAF1Q9H7N4 1312 aaKnown RBP22.32■■□□□ 1.16
C19orf54-202ENST00000469741 DDX10Q13206 875 aaKnown RBP22.31■■□□□ 1.16
C19orf54-202ENST00000469741 RBM33Q96EV2 1170 aaKnown RBP22.31■■□□□ 1.16
C19orf54-202ENST00000469741 CERKQ8TCT0 537 aa22.3■■□□□ 1.16
C19orf54-202ENST00000469741 YTHDC1Q96MU7 727 aaKnown RBP22.29■■□□□ 1.16
C19orf54-202ENST00000469741 ADAMTS13Q76LX8 1427 aa22.29■■□□□ 1.16
C19orf54-202ENST00000469741 PLEKHG1Q9ULL1 1385 aa22.29■■□□□ 1.16
C19orf54-202ENST00000469741 NRXN3Q9Y4C0 1643 aa22.28■■□□□ 1.16
C19orf54-202ENST00000469741 HIRIP3Q9BW71 556 aaPredicted RBP22.27■■□□□ 1.16
C19orf54-202ENST00000469741 ADGRF5Q8IZF2 1346 aa22.27■■□□□ 1.16
C19orf54-202ENST00000469741 PPLO60437 1756 aa22.25■■□□□ 1.15
C19orf54-202ENST00000469741 EIF4G2P78344 907 aaKnown RBP eCLIP22.25■■□□□ 1.15
C19orf54-202ENST00000469741 PELP1Q8IZL8 1130 aaKnown RBP22.25■■□□□ 1.15
C19orf54-202ENST00000469741 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.25■■□□□ 1.15
C19orf54-202ENST00000469741 HSPA5P11021 654 aaKnown RBP22.22■■□□□ 1.15
C19orf54-202ENST00000469741 NBPF8Q3BBV2 869 aa22.22■■□□□ 1.15
C19orf54-202ENST00000469741 PTPRUQ92729 1446 aa22.21■■□□□ 1.15
C19orf54-202ENST00000469741 METP08581 1390 aa22.21■■□□□ 1.15
C19orf54-202ENST00000469741 HDGFP51858 240 aaKnown RBP22.2■■□□□ 1.14
C19orf54-202ENST00000469741 IFT172Q9UG01 1749 aa22.2■■□□□ 1.14
C19orf54-202ENST00000469741 TBX22Q9Y458 520 aa22.19■■□□□ 1.14
C19orf54-202ENST00000469741 ILDR1Q86SU0 546 aaPredicted RBP22.18■■□□□ 1.14
C19orf54-202ENST00000469741 KDM2AQ9Y2K7 1162 aa22.17■■□□□ 1.14
C19orf54-202ENST00000469741 LRRC7Q96NW7 1537 aa22.17■■□□□ 1.14
C19orf54-202ENST00000469741 CHD2O14647 1828 aaKnown RBP22.17■■□□□ 1.14
C19orf54-202ENST00000469741 XIRP1Q702N8 1843 aaKnown RBP22.17■■□□□ 1.14
C19orf54-202ENST00000469741 KCNA6P17658 529 aa22.17■■□□□ 1.14
C19orf54-202ENST00000469741 SETBP1Q9Y6X0 1596 aa22.16■■□□□ 1.14
C19orf54-202ENST00000469741 RPGRIP1LQ68CZ1 1315 aa22.16■■□□□ 1.14
C19orf54-202ENST00000469741 VGFO15240 615 aaPredicted RBP22.15■■□□□ 1.14
C19orf54-202ENST00000469741 SETD1AO15047 1707 aaKnown RBP22.14■■□□□ 1.14
C19orf54-202ENST00000469741 DCAF11Q8TEB1 546 aa22.13■■□□□ 1.13
C19orf54-202ENST00000469741 ALKQ9UM73 1620 aa22.13■■□□□ 1.13
C19orf54-202ENST00000469741 TMEM132EQ6IEE7 984 aa22.12■■□□□ 1.13
C19orf54-202ENST00000469741 AMOTL2Q9Y2J4 779 aa22.12■■□□□ 1.13
C19orf54-202ENST00000469741 CCER2I3L3R5 266 aa22.12■■□□□ 1.13
C19orf54-202ENST00000469741 ANP32CO43423 234 aa22.12■■□□□ 1.13
C19orf54-202ENST00000469741 WASHC2AQ641Q2 1341 aa22.11■■□□□ 1.13
C19orf54-202ENST00000469741 CPS1P31327 1500 aa22.1■■□□□ 1.13
C19orf54-202ENST00000469741 CFAP70Q5T0N1 1121 aa22.1■■□□□ 1.13
C19orf54-202ENST00000469741 PROSER2Q86WR7 435 aaPredicted RBP22.1■■□□□ 1.13
C19orf54-202ENST00000469741 GTF3C3Q9Y5Q9 886 aa22.1■■□□□ 1.13
C19orf54-202ENST00000469741 TMEM94Q12767 1356 aa22.09■■□□□ 1.13
C19orf54-202ENST00000469741 NWD1Q149M9 1564 aa22.08■■□□□ 1.13
C19orf54-202ENST00000469741 PIK3C2GO75747 1445 aa22.08■■□□□ 1.12
C19orf54-202ENST00000469741 ASXL1Q8IXJ9 1541 aa22.07■■□□□ 1.12
C19orf54-202ENST00000469741 FBXO41Q8TF61 875 aa22.07■■□□□ 1.12
C19orf54-202ENST00000469741 DIP2AQ14689 1571 aa22.06■■□□□ 1.12
C19orf54-202ENST00000469741 RALGAPBQ86X10 1494 aa22.05■■□□□ 1.12
C19orf54-202ENST00000469741 NRXN1Q9ULB1 1477 aa22.05■■□□□ 1.12
C19orf54-202ENST00000469741 CCDC7Q96M83 1385 aa22.05■■□□□ 1.12
C19orf54-202ENST00000469741 STK26Q9P289 416 aa22.04■■□□□ 1.12
C19orf54-202ENST00000469741 UBAP1LF5GYI3 381 aa22.04■■□□□ 1.12
C19orf54-202ENST00000469741 XRN1Q8IZH2 1706 aaKnown RBP22.03■■□□□ 1.12
C19orf54-202ENST00000469741 C14orf93Q9H972 538 aaKnown RBP22.02■■□□□ 1.12
C19orf54-202ENST00000469741 ROBO2Q9HCK4 1378 aa22.02■■□□□ 1.12
C19orf54-202ENST00000469741 MYOM2P54296 1465 aa22.02■■□□□ 1.12
C19orf54-202ENST00000469741 PIP4K2BP78356 416 aa22■■□□□ 1.11
C19orf54-202ENST00000469741 PIK3R4Q99570 1358 aa22■■□□□ 1.11
C19orf54-202ENST00000469741 C11orf95C9JLR9 678 aaPredicted RBP21.99■■□□□ 1.11
C19orf54-202ENST00000469741 WAPLQ7Z5K2 1190 aa21.99■■□□□ 1.11
C19orf54-202ENST00000469741 USP47Q96K76 1375 aa21.99■■□□□ 1.11
C19orf54-202ENST00000469741 NKTRP30414 1462 aaKnown RBP21.99■■□□□ 1.11
C19orf54-202ENST00000469741 IQSEC2Q5JU85 1478 aa21.97■■□□□ 1.11
C19orf54-202ENST00000469741 PLEKHH1Q9ULM0 1364 aa21.97■■□□□ 1.11
C19orf54-202ENST00000469741 NBPF1Q3BBV0 1214 aa21.97■■□□□ 1.11
C19orf54-202ENST00000469741 KIF7Q2M1P5 1343 aa21.95■■□□□ 1.1
C19orf54-202ENST00000469741 ADGRB1O14514 1584 aa21.93■■□□□ 1.1
C19orf54-202ENST00000469741 YTHDC2Q9H6S0 1430 aaKnown RBP21.92■■□□□ 1.1
C19orf54-202ENST00000469741 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.92■■□□□ 1.1
C19orf54-202ENST00000469741 PRAG1Q86YV5 1406 aa21.92■■□□□ 1.1
C19orf54-202ENST00000469741 C14orf37Q86TY3 774 aa21.92■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 142.3 ms